MGE detailed information
MGE type: Genomic_island MGE length: 20682 bp
Accession: NZ_LR740776 Location: 284161..304842 Organism: Escherichia coli strain BEN2908 isolate Replicon: chromosome
Accession: NZ_LR740776 Location: 284161..304842 Organism: Escherichia coli strain BEN2908 isolate Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APEC2908_RS01280 () | 280276..280701 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| APEC2908_RS01285 () | 280706..282190 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| APEC2908_RS01290 () | 282213..282716 | - | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| APEC2908_RS01295 () | 283422..283940 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| APEC2908_RS01300 () | 284161..286143 | + | 1983 | WP_000053636.1 | Actin cross-linking toxin VgrG1 | VF |
| APEC2908_RS01305 () | 286250..287296 | + | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| APEC2908_RS01310 () | 287289..288728 | + | 1440 | WP_000528852.1 | DUF4150 domain-containing protein | - |
| APEC2908_RS01315 () | 288703..288993 | + | 291 | WP_000513317.1 | hypothetical protein | - |
| APEC2908_RS01320 () | 289251..290015 | + | 765 | Protein_256 | ISAs1 family transposase ISEc1 | Transposase |
| APEC2908_RS01325 () | 290244..290747 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| APEC2908_RS01330 () | 290841..291329 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| APEC2908_RS01335 () | 291355..291549 | + | 195 | Protein_259 | transposase | - |
| APEC2908_RS01340 () | 291600..292370 | - | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| APEC2908_RS01345 () | 292551..292997 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| APEC2908_RS01350 () | 293040..295484 | - | 2445 | WP_000973137.1 | Acyl-coenzyme A dehydrogenase | VF |
| APEC2908_RS01355 () | 295724..296302 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| APEC2908_RS01360 () | 296507..297274 | + | 768 | WP_001331866.1 | class II glutamine amidotransferase | - |
| APEC2908_RS01365 () | 297245..297985 | - | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| APEC2908_RS01370 () | 298297..299046 | + | 750 | WP_000093934.1 | hypothetical protein | VF |
| APEC2908_RS01375 () | 299222..299719 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| APEC2908_RS01380 () | 299802..299960 | - | 159 | WP_014639450.1 | hypothetical protein | - |
| APEC2908_RS01385 () | 300039..301751 | - | 1713 | Protein_269 | Flagellar biosynthesis protein FlhA | VF |
| APEC2908_RS01390 () | 301723..302508 | + | 786 | WP_000207544.1 | hypothetical protein | VF |
| APEC2908_RS01395 () | 302579..303634 | + | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| APEC2908_RS01400 () | 303686..303979 | + | 294 | WP_161476128.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| APEC2908_RS01405 () | 303982..304380 | + | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| APEC2908_RS01410 () | 304390..304842 | + | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| APEC2908_RS01415 () | 305032..306171 | + | 1140 | WP_000521577.1 | RNA ligase RtcB family protein | - |
| APEC2908_RS01420 () | 306168..306782 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| APEC2908_RS01425 () | 306839..308296 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| APEC2908_RS01430 () | 308557..309015 | + | 459 | WP_001291988.1 | xanthine phosphoribosyltransferase | - |
| - () | 309611..309691 | + | 81 | NuclAT_5 | - | - |
| - () | 309611..309691 | + | 81 | NuclAT_5 | - | - |
| - () | 309611..309691 | + | 81 | NuclAT_5 | - | - |
| - () | 309611..309691 | + | 81 | NuclAT_5 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|