MGE detailed information
MGE type: Prophage MGE length: 61611 bp
Accession: NZ_LR740758 Location: 4603012..4664622 Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old Replicon: chromosome
Accession: NZ_LR740758 Location: 4603012..4664622 Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APEC5202_RS22305 () | 4598405..4598902 | + | 498 | WP_000019227.1 | chorismate lyase | - |
| APEC5202_RS22310 () | 4598915..4599787 | + | 873 | WP_000455225.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| APEC5202_RS22315 () | 4599940..4602363 | - | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| APEC5202_RS22320 () | 4602534..4602902 | + | 369 | WP_000002899.1 | diacylglycerol kinase | - |
| APEC5202_RS22325 () | 4603012..4603620 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| APEC5202_RS22330 () | 4603693..4605018 | + | 1326 | WP_001296637.1 | MATE family efflux transporter DinF | - |
| APEC5202_RS22335 () | 4605134..4605343 | + | 210 | WP_001296638.1 | CsbD family protein | - |
| APEC5202_RS22340 () | 4605385..4605900 | - | 516 | WP_000416264.1 | zinc uptake transcriptional repressor Zur | - |
| APEC5202_RS22345 () | 4606372..4606944 | + | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| APEC5202_RS26625 () | 4606974..4607360 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| APEC5202_RS26770 () | 4607400..4607573 | + | 174 | WP_000390072.1 | hypothetical protein | - |
| APEC5202_RS22350 () | 4607621..4607902 | - | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| APEC5202_RS22355 () | 4607939..4608511 | - | 573 | WP_001061345.1 | 3'-5' exoribonuclease | - |
| APEC5202_RS22360 () | 4608511..4609269 | - | 759 | WP_021518219.1 | DUF551 domain-containing protein | - |
| APEC5202_RS22365 () | 4609272..4609463 | - | 192 | WP_001014291.1 | hypothetical protein | - |
| APEC5202_RS22370 () | 4609465..4610019 | - | 555 | WP_021518220.1 | ead/Ea22-like family protein | - |
| APEC5202_RS22375 () | 4610016..4610255 | - | 240 | WP_000476212.1 | hypothetical protein | - |
| APEC5202_RS22380 () | 4610248..4610451 | - | 204 | WP_021518221.1 | hypothetical protein | - |
| APEC5202_RS22385 () | 4610448..4611326 | - | 879 | WP_021518222.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| APEC5202_RS22390 () | 4611317..4611853 | - | 537 | WP_021518223.1 | 5'-deoxynucleotidase | - |
| APEC5202_RS22395 () | 4611981..4612805 | - | 825 | WP_000081280.1 | DUF2303 family protein | - |
| APEC5202_RS22400 () | 4612871..4613233 | - | 363 | WP_021549272.1 | hypothetical protein | - |
| APEC5202_RS22405 () | 4613691..4614344 | - | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| APEC5202_RS22410 () | 4614440..4614637 | + | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| APEC5202_RS22415 () | 4614665..4615249 | + | 585 | WP_000514174.1 | hypothetical protein | - |
| APEC5202_RS22420 () | 4615425..4615637 | + | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| APEC5202_RS26775 () | 4615594..4616586 | + | 993 | WP_000054957.1 | hypothetical protein | - |
| APEC5202_RS22430 () | 4616681..4617334 | + | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| APEC5202_RS22435 () | 4617331..4617657 | + | 327 | WP_000210187.1 | LexA family transcriptional regulator | - |
| APEC5202_RS22440 () | 4617654..4618043 | + | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| APEC5202_RS22445 () | 4618063..4618872 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| APEC5202_RS22450 () | 4618880..4619869 | + | 990 | WP_001596849.1 | DUF968 domain-containing protein | - |
| APEC5202_RS22455 () | 4619887..4620252 | + | 366 | WP_001204819.1 | antitermination protein | - |
| APEC5202_RS22460 () | 4620337..4620783 | - | 447 | WP_001038608.1 | hypothetical protein | - |
| APEC5202_RS22465 () | 4621054..4621257 | + | 204 | WP_000917724.1 | hypothetical protein | - |
| APEC5202_RS22470 () | 4621408..4622460 | + | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| APEC5202_RS22475 () | 4622528..4622743 | + | 216 | WP_001596848.1 | class II holin family protein | - |
| APEC5202_RS22480 () | 4622748..4623299 | + | 552 | WP_021518230.1 | YdfR family protein | - |
| APEC5202_RS22485 () | 4623247..4623507 | - | 261 | WP_001306174.1 | hypothetical protein | - |
| APEC5202_RS22490 () | 4623621..4624154 | + | 534 | WP_021518231.1 | lysozyme | - |
| APEC5202_RS22495 () | 4624151..4624618 | + | 468 | WP_001377819.1 | lysis protein | - |
| APEC5202_RS22500 () | 4624606..4624758 | + | 153 | WP_001139675.1 | hypothetical protein | - |
| APEC5202_RS26780 () | 4625318..4625467 | + | 150 | Protein_4405 | HNH endonuclease | - |
| APEC5202_RS22505 () | 4625836..4626327 | + | 492 | WP_000349509.1 | DUF1441 family protein | - |
| APEC5202_RS22510 () | 4626327..4628429 | + | 2103 | WP_001596844.1 | phage terminase large subunit family protein | - |
| APEC5202_RS22515 () | 4628426..4628638 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| APEC5202_RS22520 () | 4628638..4630146 | + | 1509 | WP_001596843.1 | phage portal protein | - |
| APEC5202_RS22525 () | 4630091..4632118 | + | 2028 | WP_001596842.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| APEC5202_RS22530 () | 4632205..4632528 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| APEC5202_RS22535 () | 4632521..4632796 | + | 276 | WP_021518232.1 | phage protein | - |
| APEC5202_RS22540 () | 4632808..4633386 | + | 579 | WP_103529995.1 | phage tail protein | - |
| APEC5202_RS22545 () | 4633383..4633784 | + | 402 | WP_001079419.1 | phage minor tail U family protein | - |
| APEC5202_RS22550 () | 4633795..4634538 | + | 744 | WP_000211128.1 | phage tail protein | - |
| APEC5202_RS22555 () | 4634599..4634985 | + | 387 | WP_021518233.1 | phage minor tail protein G | - |
| APEC5202_RS22560 () | 4634994..4635323 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| APEC5202_RS22565 () | 4635295..4638351 | + | 3057 | WP_001596840.1 | phage tail tape measure protein | - |
| APEC5202_RS22570 () | 4638351..4638680 | + | 330 | WP_001596839.1 | phage tail protein | - |
| APEC5202_RS22575 () | 4638690..4639388 | + | 699 | WP_001152341.1 | phage minor tail protein L | - |
| APEC5202_RS22580 () | 4639393..4640136 | + | 744 | WP_031935383.1 | C40 family peptidase | - |
| APEC5202_RS22585 () | 4640034..4640681 | + | 648 | WP_000741576.1 | tail assembly protein | - |
| APEC5202_RS22590 () | 4640742..4644221 | + | 3480 | WP_021518234.1 | host specificity protein J | - |
| APEC5202_RS22595 () | 4644289..4644888 | + | 600 | WP_001228252.1 | Outer membrane protein X | VF |
| APEC5202_RS22600 () | 4644953..4647331 | + | 2379 | WP_021518235.1 | prophage tail fiber N-terminal domain-containing protein | - |
| APEC5202_RS22605 () | 4647331..4647612 | + | 282 | WP_021518236.1 | hypothetical protein | - |
| APEC5202_RS22610 () | 4647622..4648662 | + | 1041 | WP_021518237.1 | tail fiber domain-containing protein | - |
| APEC5202_RS22615 () | 4648705..4648992 | + | 288 | WP_021518238.1 | hypothetical protein | - |
| APEC5202_RS22620 () | 4649110..4649358 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| APEC5202_RS22625 () | 4649420..4650517 | - | 1098 | WP_000332271.1 | hypothetical protein ; Integrase | Integrase |
| APEC5202_RS22630 () | 4650606..4651643 | + | 1038 | WP_000543828.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| APEC5202_RS22635 () | 4651777..4652019 | + | 243 | WP_000891396.1 | envelope stress response protein PspG | - |
| APEC5202_RS22640 () | 4652184..4653167 | - | 984 | WP_001007672.1 | Quinone oxidoreductase 1 | VF |
| APEC5202_RS22645 () | 4653273..4655321 | - | 2049 | WP_000149529.1 | FAD-binding protein | - |
| APEC5202_RS22650 () | 4655311..4656711 | - | 1401 | WP_001183173.1 | MHS family MFS transporter | - |
| APEC5202_RS22655 () | 4656802..4657581 | - | 780 | WP_001059070.1 | enoyl-CoA hydratase/isomerase family protein | - |
| APEC5202_RS22660 () | 4657574..4658086 | - | 513 | WP_001514075.1 | hypothetical protein | - |
| APEC5202_RS22665 () | 4658165..4659145 | - | 981 | WP_001514076.1 | malonate decarboxylase subunit alpha | - |
| APEC5202_RS22670 () | 4659401..4660435 | + | 1035 | WP_001129782.1 | LacI family transcriptional regulator | - |
| APEC5202_RS22675 () | 4660508..4661923 | + | 1416 | WP_001296639.1 | replicative DNA helicase | - |
| APEC5202_RS22680 () | 4661976..4663055 | + | 1080 | WP_001147328.1 | alanine racemase | - |
| APEC5202_RS22685 () | 4663078..4663627 | + | 550 | Protein_4442 | nicotinamide mononucleotide transporter | - |
| APEC5202_RS22690 () | 4663624..4664622 | + | 999 | WP_001331852.1 | AAA family ATPase | - |
| APEC5202_RS22695 () | 4664704..4665897 | + | 1194 | WP_000486945.1 | aromatic amino acid transaminase | - |
| APEC5202_RS22700 () | 4666079..4668823 | + | 2745 | WP_001331851.1 | 2-oxoglutarate dehydrogenase E1 component | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|