MGE detailed information
MGE type: Genomic_island MGE length: 47654 bp
Accession: NZ_LR740758 Location: 4001399..4049052 Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old Replicon: chromosome
Accession: NZ_LR740758 Location: 4001399..4049052 Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APEC5202_RS19490 () | 3997243..3997902 | + | 660 | WP_000747631.1 | OmpA family lipoprotein | - |
| APEC5202_RS19495 () | 3998006..3998980 | + | 975 | WP_000805027.1 | glyoxylate/hydroxypyruvate reductase GhrB | - |
| APEC5202_RS19500 () | 3999030..3999740 | - | 711 | WP_000190516.1 | DUF3053 domain-containing protein | - |
| APEC5202_RS19505 () | 4000174..4000464 | + | 291 | WP_000455798.1 | HTH-type transcriptional regulator | - |
| APEC5202_RS19510 () | 4000745..4000957 | + | 213 | WP_000014594.1 | RNA chaperone/antiterminator CspA | - |
| APEC5202_RS19515 () | 4001145..4001297 | - | 153 | WP_001135732.1 | type I toxin-antitoxin system toxin HokA | - |
| APEC5202_RS19525 () | 4002860..4003699 | - | 840 | WP_096951086.1 | DUF4942 domain-containing protein | - |
| APEC5202_RS19530 () | 4003784..4003981 | - | 198 | WP_000839243.1 | DUF957 domain-containing protein | - |
| APEC5202_RS19535 () | 4003993..4004481 | - | 489 | WP_097293275.1 | hypothetical protein | - |
| APEC5202_RS19540 () | 4004478..4004858 | - | 381 | WP_103529922.1 | TA system toxin CbtA family protein | Toxin Detail |
| APEC5202_RS19545 () | 4004948..4005316 | - | 369 | WP_089519525.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| APEC5202_RS19550 () | 4005366..4006010 | - | 645 | WP_097293273.1 | antitoxin of toxin-antitoxin stability system | - |
| APEC5202_RS19555 () | 4006029..4006250 | - | 222 | WP_000692300.1 | DUF987 domain-containing protein | - |
| APEC5202_RS19560 () | 4006313..4006789 | - | 477 | WP_141088300.1 | RadC family protein | - |
| APEC5202_RS19565 () | 4006804..4007277 | - | 474 | WP_103529921.1 | antirestriction protein | - |
| APEC5202_RS19570 () | 4007540..4008358 | - | 819 | WP_103529920.1 | DUF945 domain-containing protein | - |
| APEC5202_RS19575 () | 4008457..4008768 | - | 312 | WP_001556366.1 | hypothetical protein | - |
| APEC5202_RS19580 () | 4008788..4009078 | - | 291 | WP_001545346.1 | hypothetical protein | - |
| APEC5202_RS19585 () | 4009107..4009385 | - | 279 | WP_001545361.1 | hypothetical protein | - |
| APEC5202_RS19590 () | 4009646..4010326 | - | 681 | WP_097505405.1 | WYL domain-containing protein | - |
| APEC5202_RS19595 () | 4010529..4011413 | - | 885 | WP_161477584.1 | 50S ribosome-binding GTPase | - |
| APEC5202_RS19600 () | 4011521..4012483 | + | 963 | WP_103530043.1 | hypothetical protein | - |
| APEC5202_RS19605 () | 4012480..4013334 | - | 855 | WP_103530041.1 | replication regulatory RepB family protein | - |
| APEC5202_RS26620 () | 4014926..4015174 | - | 249 | WP_162542031.1 | hypothetical protein | - |
| APEC5202_RS19610 () | 4015280..4016011 | + | 732 | WP_103530040.1 | inovirus Gp2 family protein | - |
| APEC5202_RS19615 () | 4016522..4016974 | + | 453 | WP_001100706.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| APEC5202_RS26760 () | 4017403..4018004 | + | 602 | Protein_3855 | IS481 family transposase ISKpn28 | Transposase |
| APEC5202_RS19625 () | 4019708..4020274 | + | 567 | WP_103530045.1 | inovirus-type Gp2 protein | - |
| APEC5202_RS19630 () | 4020521..4021093 | + | 573 | WP_103530044.1 | hypothetical protein | - |
| APEC5202_RS19635 () | 4021162..4021398 | + | 237 | WP_000958094.1 | AlpA family transcriptional regulator | - |
| APEC5202_RS19640 () | 4021668..4022203 | + | 536 | Protein_3859 | hypothetical protein | - |
| APEC5202_RS19645 () | 4022222..4022566 | - | 345 | Protein_3860 | prop effector | - |
| APEC5202_RS19650 () | 4023460..4023894 | + | 435 | WP_001519134.1 | H-NS histone family protein | - |
| APEC5202_RS19655 () | 4024311..4024880 | - | 570 | WP_097293261.1 | hypothetical protein | - |
| APEC5202_RS19660 () | 4024981..4026213 | - | 1233 | WP_053878002.1 | dNTP triphosphohydrolase | - |
| APEC5202_RS19665 () | 4026343..4027248 | - | 906 | Protein_3864 | IS3 family transposase ISLad1 | Transposase |
| APEC5202_RS19670 () | 4027258..4028409 | - | 1152 | WP_097506643.1 | IS30 family transposase IS30D | Transposase |
| APEC5202_RS19675 () | 4028477..4028734 | - | 258 | Protein_3866 | IS3 family transposase IS911 | Transposase |
| APEC5202_RS19680 () | 4029295..4029570 | + | 276 | WP_169758058.1 | hypothetical protein | VF |
| APEC5202_RS19685 () | 4029615..4030142 | + | 528 | WP_025653491.1 | Pap fimbrial major pilin protein | VF |
| APEC5202_RS19690 () | 4030221..4030808 | + | 588 | WP_025653490.1 | PAP fimbrial minor pilin protein | VF |
| APEC5202_RS19695 () | 4030964..4033471 | + | 2508 | WP_086598241.1 | Outer membrane usher protein PapC | VF |
| APEC5202_RS19700 () | 4033540..4034271 | + | 732 | WP_046642511.1 | Chaperone protein PapD | VF |
| APEC5202_RS19705 () | 4034308..4034871 | + | 564 | WP_046642512.1 | nuclease PIN | - |
| APEC5202_RS19710 () | 4034954..4035469 | + | 516 | WP_046656879.1 | Fimbrial adapter PapF | VF |
| APEC5202_RS19715 () | 4035492..4036484 | + | 993 | WP_046642516.1 | nuclease PIN | - |
| APEC5202_RS19720 () | 4036537..4037322 | + | 786 | WP_052752988.1 | EAL domain-containing protein | - |
| APEC5202_RS19725 () | 4037635..4038843 | - | 1209 | WP_080871126.1 | IS256 family transposase ISEc39 | Transposase |
| APEC5202_RS19730 () | 4038915..4039112 | - | 198 | Protein_3877 | transposase | - |
| APEC5202_RS19735 () | 4039442..4039674 | - | 233 | Protein_3878 | IS110 family transposase | - |
| APEC5202_RS19740 () | 4040241..4040693 | - | 453 | Protein_3879 | site-specific integrase | - |
| APEC5202_RS19745 () | 4040801..4041982 | - | 1182 | WP_103529933.1 | Prophage integrase IntS ; Integrase | Integrase |
| APEC5202_RS19755 () | 4042665..4044047 | + | 1383 | WP_000834420.1 | glycoside-pentoside-hexuronide family transporter | - |
| APEC5202_RS19760 () | 4044057..4046375 | + | 2319 | WP_000702905.1 | alpha-xylosidase | - |
| APEC5202_RS19765 () | 4046670..4048223 | + | 1554 | WP_001314234.1 | PRD domain-containing protein | - |
| APEC5202_RS19770 () | 4048250..4048720 | + | 471 | WP_000355547.1 | fructose PTS transporter subunit IIA | - |
| APEC5202_RS19775 () | 4048738..4049052 | + | 315 | WP_001028073.1 | fructose PTS transporter subunit IIB | - |
| APEC5202_RS19780 () | 4049077..4050168 | + | 1092 | WP_000662199.1 | PTS fructose transporter subunit IIC | - |
| APEC5202_RS19785 () | 4050180..4051031 | + | 852 | WP_021522884.1 | class II fructose-bisphosphate aldolase family protein | - |
| APEC5202_RS19790 () | 4051112..4051972 | + | 861 | WP_000961378.1 | ketose-bisphosphate aldolase | - |
| APEC5202_RS19795 () | 4052020..4052952 | + | 933 | WP_021522883.1 | ROK family protein | - |
| APEC5202_RS19800 () | 4052933..4053613 | + | 681 | WP_001332278.1 | D-lyxose/D-mannose family sugar isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|