NZ_LR7407583230298..3421116

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 190819 bp
Accession: NZ_LR740758        Location: 3230298..3421116         Organism: Escherichia coli strain BEN5202 isolate laying hen 51 weeks old       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
APEC5202_RS15805 () 3226007..3228142 - 2136 WP_000839776.1 ornithine decarboxylase -
APEC5202_RS15810 () 3228541..3229248 + 708 WP_000234491.1 DUF554 domain-containing protein -
APEC5202_RS15820 () 3229627..3230889 + 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
APEC5202_RS15825 () 3231341..3234856 + 3516 WP_000344091.1 ATP-binding protein -
APEC5202_RS15830 () 3234965..3236464 - 1500 WP_001026222.1 phosphoethanolamine transferase -
APEC5202_RS15835 () 3236639..3237385 - 747 WP_001350744.1 porin family protein -
APEC5202_RS15840 () 3237745..3238755 - 1011 WP_000758687.1 Fimbrial adhesin PapG VF
APEC5202_RS15845 () 3238799..3239299 - 501 WP_000620429.1 Minor fimbrial protein PrsF VF
APEC5202_RS15850 () 3239374..3239895 - 522 WP_000723802.1 Fimbrial protein PapE VF
APEC5202_RS15855 () 3239922..3240458 - 537 WP_000597712.1 Fimbrial adapter PapK VF
APEC5202_RS15860 () 3240468..3241048 - 581 Protein_3109 hypothetical protein VF
APEC5202_RS15865 () 3241085..3241819 - 735 WP_000265730.1 Chaperone protein PapD VF
APEC5202_RS15870 () 3241890..3244400 - 2511 WP_000654934.1 Outer membrane usher protein PapC VF
APEC5202_RS15875 () 3244459..3245046 - 588 WP_001350743.1 PAP fimbrial minor pilin protein VF
APEC5202_RS15885 () 3246422..3246970 - 549 WP_001513962.1 Pap fimbrial major pilin protein VF
APEC5202_RS15890 () 3247177..3247491 - 315 WP_000930062.1 Major pilu subunit operon regulatory protein PapB VF
APEC5202_RS15895 () 3247932..3248165 + 234 WP_000006207.1 P fimbrial regulatory protein KS71A VF
APEC5202_RS15900 () 3248508..3248744 - 237 WP_000958091.1 AlpA family transcriptional regulator -
APEC5202_RS15905 () 3248813..3249388 - 576 WP_000991571.1 hypothetical protein -
APEC5202_RS15910 () 3249646..3250212 - 567 WP_001126806.1 inovirus-type Gp2 protein -
APEC5202_RS15915 () 3250321..3251018 - 698 Protein_3120 IS1 family transposase IS1A Transposase
APEC5202_RS15920 () 3251141..3252368 - 1228 Protein_3121 IS3 family transposase -
APEC5202_RS15925 () 3252671..3253878 + 1208 Protein_3122 IS3 family transposase ISEc48 Transposase
APEC5202_RS15930 () 3253913..3254278 - 366 WP_000639467.1 hypothetical protein -
APEC5202_RS15935 () 3254321..3255685 - 1365 WP_000948756.1 Phosphoglycerate transporter protein VF
APEC5202_RS15940 () 3256084..3257301 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
APEC5202_RS15945 () 3257298..3259307 + 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
APEC5202_RS15950 () 3259297..3260544 + 1248 WP_001350739.1 two-component system response regulator PgtA -
APEC5202_RS15955 () 3260790..3260903 + 114 Protein_3128 hypothetical protein -
APEC5202_RS26870 () 3260935..3261027 + 93 Protein_3129 ATP-dependent helicase -
APEC5202_RS26610 () 3261136..3261459 - 324 WP_015953064.1 hypothetical protein -
APEC5202_RS15960 () 3261524..3262168 - 645 WP_001332013.1 hypothetical protein -
APEC5202_RS15965 () 3262189..3262458 - 270 WP_000226516.1 PerC family transcriptional regulator -
APEC5202_RS15970 () 3262537..3263182 - 646 Protein_3133 ParB N-terminal domain-containing protein -
APEC5202_RS15980 () 3264541..3265753 + 1213 Protein_3135 IS256 family transposase -
APEC5202_RS15985 () 3265933..3267981 - 2049 WP_021522852.1 TonB-dependent siderophore receptor IreA -
APEC5202_RS15990 () 3268763..3269503 - 741 WP_001075450.1 inovirus Gp2 family protein -
APEC5202_RS15995 () 3269623..3270834 - 1212 WP_174235634.1 IS3 family transposase IS1203 Transposase
APEC5202_RS26615 () 3270919..3271167 + 249 WP_000573217.1 hypothetical protein -
APEC5202_RS16000 () 3272506..3273294 + 789 Protein_3140 hypothetical protein -
APEC5202_RS16005 () 3273291..3274241 - 951 WP_000157734.1 hypothetical protein -
APEC5202_RS16010 () 3274347..3275231 + 885 WP_016239325.1 50S ribosome-binding GTPase -
APEC5202_RS16015 () 3275434..3276114 + 681 WP_001282927.1 WYL domain-containing protein -
APEC5202_RS16020 () 3276262..3276939 + 678 WP_001097312.1 hypothetical protein -
APEC5202_RS16025 () 3276945..3277178 + 234 WP_001278287.1 DUF905 family protein -
APEC5202_RS16030 () 3277268..3278086 + 819 WP_001175142.1 DUF945 domain-containing protein -
APEC5202_RS16035 () 3278177..3278662 + 486 WP_000860054.1 antirestriction protein -
APEC5202_RS16040 () 3278677..3279153 + 477 WP_001186756.1 RadC family protein -
APEC5202_RS16045 () 3279222..3279443 + 222 WP_000692312.1 DUF987 domain-containing protein -
APEC5202_RS16050 () 3279522..3279899 + 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
APEC5202_RS16055 () 3279946..3280323 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
APEC5202_RS16060 () 3280320..3280808 + 489 WP_000761714.1 hypothetical protein -
APEC5202_RS16065 () 3280820..3281017 + 198 WP_000839254.1 DUF957 domain-containing protein -
APEC5202_RS16070 () 3281102..3281947 + 846 WP_001280513.1 DUF4942 domain-containing protein -
APEC5202_RS16075 () 3282018..3283553 + 1536 WP_000492897.1 hypothetical protein VF
APEC5202_RS16080 () 3283950..3284120 + 171 Protein_3156 IS110 family transposase ISEc32 Transposase
APEC5202_RS16085 () 3284930..3285913 + 984 WP_001331698.1 Arabinose 5-phosphate isomerase KpsF VF
APEC5202_RS16090 () 3285985..3287133 + 1149 WP_000905916.1 hypothetical protein VF
APEC5202_RS16095 () 3287157..3288833 + 1677 WP_001331697.1 Polysialic acid transport protein KpsD VF
APEC5202_RS16100 () 3288843..3289583 + 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
APEC5202_RS16105 () 3289580..3291607 + 2028 WP_000579525.1 hypothetical protein VF
APEC5202_RS16110 () 3291642..3292847 + 1206 WP_001161829.1 hypothetical protein VF
APEC5202_RS16115 () 3292997..3294226 - 1230 WP_000575410.1 hypothetical protein VF
APEC5202_RS16120 () 3294216..3295364 - 1149 WP_161477582.1 hypothetical protein VF
APEC5202_RS16125 () 3295357..3296532 - 1176 WP_000723250.1 Polysialic acid biosynthesis protein P7 VF
APEC5202_RS16130 () 3296529..3297785 - 1257 WP_001259305.1 N-acylneuraminate cytidylyltransferase VF
APEC5202_RS16135 () 3297785..3298825 - 1041 WP_000066003.1 N,N'-diacetyllegionaminic acid synthase VF
APEC5202_RS16140 () 3298822..3299445 - 624 WP_000038461.1 Putative acetyltransferase EpsM VF
APEC5202_RS16145 () 3299495..3300154 - 660 WP_000590258.1 Polysialic acid transport ATP-binding protein KpsT VF
APEC5202_RS16150 () 3300151..3300927 - 777 WP_000124301.1 Polysialic acid transport protein KpsM VF
APEC5202_RS16155 () 3301985..3302521 - 537 WP_000942829.1 Type II secretion system protein M VF
APEC5202_RS16160 () 3302523..3303701 - 1179 WP_021522854.1 hypothetical protein VF
APEC5202_RS16165 () 3303698..3304675 - 978 WP_000633202.1 Putative type II secretion system protein K VF
APEC5202_RS16170 () 3304672..3305277 - 606 WP_001331694.1 Type II secretion system protein J VF
APEC5202_RS16175 () 3305274..3305645 - 372 WP_000820096.1 hypothetical protein VF
APEC5202_RS16180 () 3305642..3306205 - 564 WP_001115118.1 Type II secretion system protein H VF
APEC5202_RS16185 () 3306209..3306664 - 456 WP_001087289.1 Type II secretion system protein G VF
APEC5202_RS16190 () 3306681..3307904 - 1224 WP_001173408.1 Type II secretion system protein F VF
APEC5202_RS16195 () 3307904..3309397 - 1494 WP_000249340.1 Type II secretion system protein E VF
APEC5202_RS16200 () 3309397..3311457 - 2061 WP_001350731.1 Secretin GspD 2 VF
APEC5202_RS16205 () 3311487..3312446 - 960 WP_001350730.1 Type II secretion system protein C 2 VF
APEC5202_RS16210 () 3312464..3312874 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
APEC5202_RS16215 () 3312940..3313749 - 810 WP_000895874.1 Prepilin peptidase PppA VF
APEC5202_RS16220 () 3313913..3318475 - 4563 WP_001034562.1 hypothetical protein VF
APEC5202_RS16225 () 3318959..3320641 - 1683 WP_000259302.1 glycolate permease GlcA -
APEC5202_RS16230 () 3320997..3323168 - 2172 WP_000084100.1 malate synthase G -
APEC5202_RS16235 () 3323190..3323594 - 405 WP_000853256.1 protein GlcG -
APEC5202_RS16240 () 3323599..3324822 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
APEC5202_RS16245 () 3324833..3325885 - 1053 WP_000943075.1 glycolate oxidase subunit GlcE -
APEC5202_RS16250 () 3325885..3327384 - 1500 WP_000026154.1 glycolate oxidase subunit GlcD -
APEC5202_RS16255 () 3327635..3328399 + 765 WP_001314155.1 transcriptional regulator GlcC -
APEC5202_RS16260 () 3328406..3329548 - 1143 WP_001331688.1 DNA-binding protein -
APEC5202_RS16265 () 3329910..3331643 + 1734 WP_000262898.1 Long-chain-fatty-acid--AMP ligase FadD26 VF
APEC5202_RS16270 () 3331640..3332554 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
APEC5202_RS16275 () 3332586..3332834 + 249 WP_000248098.1 acyl carrier protein -
APEC5202_RS16280 () 3332834..3334006 + 1173 WP_016239329.1 8-amino-7-oxononanoate synthase VF
APEC5202_RS16285 () 3334041..3335120 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
APEC5202_RS16290 () 3335117..3336187 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
APEC5202_RS16295 () 3336218..3336778 - 561 WP_001141149.1 YtfJ family protein -
APEC5202_RS16300 () 3336778..3337614 - 837 WP_000984967.1 hypothetical protein -
APEC5202_RS16305 () 3337614..3338963 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
APEC5202_RS16310 () 3339009..3339767 - 759 WP_001445422.1 hypothetical protein -
APEC5202_RS16315 () 3339799..3340512 - 714 WP_001076282.1 thymidylate kinase -
APEC5202_RS16320 () 3340687..3341379 + 693 WP_001190683.1 thymidylate kinase -
APEC5202_RS16325 () 3341428..3342927 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
APEC5202_RS16330 () 3343219..3345078 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
APEC5202_RS16335 () 3345283..3346149 + 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
APEC5202_RS16340 () 3346282..3346530 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
APEC5202_RS16345 () 3346543..3346884 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
APEC5202_RS16350 () 3346877..3347365 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
APEC5202_RS16355 () 3347358..3347852 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
APEC5202_RS16360 () 3347852..3349555 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
APEC5202_RS16365 () 3349552..3350730 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
APEC5202_RS16370 () 3350720..3351706 - 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
APEC5202_RS16375 () 3351709..3352827 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
APEC5202_RS16380 () 3353016..3353303 - 288 WP_001059136.1 DUF2623 domain-containing protein -
APEC5202_RS16385 () 3353422..3354309 - 888 WP_001350729.1 dienelactone hydrolase family protein -
APEC5202_RS16390 () 3354466..3355506 + 1041 WP_000262190.1 L-glyceraldehyde 3-phosphate reductase -
APEC5202_RS16395 () 3355546..3356040 - 495 WP_000439331.1 TIGR00645 family protein -
APEC5202_RS16400 () 3356231..3357115 + 885 WP_000018758.1 putative oxidoreductase YghA VF
APEC5202_RS16405 () 3357154..3357579 - 426 WP_001240712.1 TonB system transport protein ExbD -
APEC5202_RS16410 () 3357586..3358320 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
APEC5202_RS16415 () 3358572..3359759 + 1188 WP_103529948.1 cystathionine beta-lyase -
APEC5202_RS16420 () 3359899..3360558 + 660 WP_000268419.1 DedA family protein -
APEC5202_RS16425 () 3360598..3361497 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
APEC5202_RS16430 () 3361691..3362854 + 1164 WP_001058819.1 alcohol dehydrogenase -
APEC5202_RS16435 () 3362959..3363786 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
APEC5202_RS16440 () 3363986..3364912 + 927 WP_000691616.1 YbjP/YqhG family protein -
APEC5202_RS16445 () 3364963..3365220 + 258 WP_000848521.1 lipoprotein YqhH -
APEC5202_RS16450 () 3365262..3367481 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
APEC5202_RS16455 () 3367733..3368482 + 750 WP_000438655.1 FadR family transcriptional regulator -
APEC5202_RS16460 () 3368805..3370277 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
APEC5202_RS16465 () 3370274..3371290 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
APEC5202_RS16470 () 3371301..3372311 + 1011 WP_000214536.1 putative oxidoreductase YjmC VF
APEC5202_RS16475 () 3372384..3373367 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
APEC5202_RS16480 () 3373409..3373891 + 483 WP_001259754.1 TRAP transporter small permease -
APEC5202_RS16485 () 3373902..3375206 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
APEC5202_RS16490 () 3375277..3376689 - 1413 WP_000059395.1 cell division protein FtsP -
APEC5202_RS16495 () 3376764..3377501 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
APEC5202_RS16500 () 3377736..3379994 - 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
APEC5202_RS16505 () 3380132..3381739 - 1608 WP_001350728.1 ABC transporter substrate-binding protein -
APEC5202_RS16510 () 3381848..3382330 - 483 WP_000183493.1 GyrI-like domain-containing protein -
APEC5202_RS16515 () 3382383..3382775 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
APEC5202_RS16520 () 3382927..3383586 + 660 WP_001221493.1 Transcriptional regulatory protein QseB VF
APEC5202_RS16525 () 3383583..3384932 + 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
APEC5202_RS16530 () 3384978..3385310 - 333 WP_000914696.1 DUF2645 family protein -
APEC5202_RS16535 () 3385317..3386509 - 1193 Protein_3247 Hcp family type VI secretion system effector -
APEC5202_RS16540 () 3386759..3387340 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
APEC5202_RS16545 () 3387371..3387685 + 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
APEC5202_RS16550 () 3387730..3388617 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
APEC5202_RS16555 () 3388614..3389561 - 948 WP_001296418.1 iron-siderophore ABC transporter substrate-binding protein -
APEC5202_RS16560 () 3389572..3390609 - 1038 WP_001298372.1 Iron-uptake system permease protein FeuC VF
APEC5202_RS16565 () 3390618..3391601 - 984 WP_000986428.1 putative siderophore transport system permease protein YfiZ VF
APEC5202_RS16570 () 3391598..3392407 - 810 WP_000940869.1 putative siderophore transport system ATP-binding protein YusV VF
APEC5202_RS16575 () 3392781..3394922 + 2142 WP_103530024.1 TonB-dependent siderophore receptor -
APEC5202_RS16580 () 3394986..3396878 - 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
APEC5202_RS16585 () 3396907..3397488 - 582 WP_000105733.1 esterase YqiA -
APEC5202_RS16590 () 3397488..3398315 - 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
APEC5202_RS16595 () 3398340..3398762 - 423 WP_000833393.1 DUF1249 family protein -
APEC5202_RS16600 () 3398763..3399392 - 630 WP_000917117.1 ADP-ribose diphosphatase -
APEC5202_RS16605 () 3399597..3401078 + 1482 WP_000735289.1 outer membrane channel protein TolC -
APEC5202_RS16610 () 3401226..3401897 + 672 WP_000831543.1 DUF1190 family protein -
APEC5202_RS16615 () 3401903..3403063 + 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
APEC5202_RS16620 () 3403548..3405344 + 1797 WP_000459865.1 aryl-sulfate sulfotransferase -
APEC5202_RS16625 () 3405362..3406030 + 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
APEC5202_RS16630 () 3406045..3406716 + 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
APEC5202_RS16635 () 3406762..3407550 - 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
APEC5202_RS16640 () 3407693..3408466 + 774 WP_001295627.1 zinc transporter ZupT -
APEC5202_RS16645 () 3408528..3408698 - 171 WP_001296421.1 hypothetical protein -
APEC5202_RS16650 () 3409269..3409832 + 564 WP_000915007.1 putative fimbrial-like protein YbgD VF
APEC5202_RS16655 () 3409919..3412441 + 2523 WP_001060674.1 Outer membrane usher protein PapC VF
APEC5202_RS16660 () 3412457..3413197 + 741 WP_001351038.1 putative fimbrial chaperone YfcS VF
APEC5202_RS16665 () 3413194..3414243 + 1050 WP_000631270.1 pilus protein -
APEC5202_RS16670 () 3414297..3414950 - 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
APEC5202_RS16675 () 3415324..3415623 + 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
APEC5202_RS16680 () 3415658..3415851 - 194 Protein_3276 cell surface composition regulator GlgS -
APEC5202_RS16685 () 3416121..3416750 + 630 WP_000599932.1 DUF1449 family protein -
APEC5202_RS16690 () 3416777..3418438 + 1662 WP_001298380.1 flotillin family protein -
- () 3418636..3418777 - 142 NuclAT_0 - -
- () 3418636..3418777 - 142 NuclAT_0 - -
- () 3418636..3418777 - 142 NuclAT_0 - -
- () 3418636..3418777 - 142 NuclAT_0 - -
APEC5202_RS16695 () 3418678..3418737 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
APEC5202_RS16700 () 3418857..3420290 - 1434 WP_000869177.1 Bifunctional protein HldE VF
APEC5202_RS16705 () 3420338..3423178 - 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
APEC5202_RS16710 () 3423201..3424502 - 1302 WP_000046243.1 inorganic triphosphatase -
APEC5202_RS16715 () 3424744..3425364 + 621 WP_001125331.1 SH3 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance