MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57084 bp
Accession: NZ_LR739071 Location: 625576..682659 Organism: Pseudomonas aeruginosa strain C7-25 isolate C7-25 Replicon: chromosome
Accession: NZ_LR739071 Location: 625576..682659 Organism: Pseudomonas aeruginosa strain C7-25 isolate C7-25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PERCYII40_RS02895 () | 620610..620957 | - | 348 | WP_034037781.1 | SMI1/KNR4 family protein | - |
| PERCYII40_RS02900 () | 620947..621561 | - | 615 | WP_034037782.1 | DMP19 family protein | - |
| PERCYII40_RS02905 () | 621752..624523 | - | 2772 | WP_128654478.1 | ImpA family metalloprotease | - |
| PERCYII40_RS02910 () | 624623..624766 | + | 144 | WP_152959728.1 | hypothetical protein | - |
| PERCYII40_RS02915 () | 624971..625120 | - | 150 | WP_153562342.1 | hypothetical protein | - |
| PERCYII40_RS02925 () | 625192..625473 | + | 282 | Protein_582 | type II toxin-antitoxin system HipA family toxin | - |
| PERCYII40_RS02930 () | 625874..627544 | - | 1671 | WP_003121814.1 | ATP-dependent helicase | - |
| PERCYII40_RS02935 () | 627541..629496 | - | 1956 | WP_003121815.1 | AAA family ATPase | - |
| PERCYII40_RS02940 () | 629574..630344 | - | 771 | WP_003121816.1 | NERD domain-containing protein | - |
| PERCYII40_RS02945 () | 630609..630827 | + | 219 | WP_049955761.1 | hypothetical protein | - |
| PERCYII40_RS02950 () | 631024..631392 | + | 369 | WP_031687198.1 | hypothetical protein | - |
| PERCYII40_RS02955 () | 631436..632524 | + | 1089 | WP_031687200.1 | hypothetical protein | - |
| PERCYII40_RS02960 () | 632724..634643 | + | 1920 | WP_003121819.1 | type I restriction-modification system subunit M | - |
| PERCYII40_RS02965 () | 634640..635977 | + | 1338 | WP_003121820.1 | restriction endonuclease subunit S | - |
| PERCYII40_RS02970 () | 635974..636915 | + | 942 | WP_003121821.1 | GIY-YIG nuclease family protein | - |
| PERCYII40_RS02975 () | 636908..638590 | + | 1683 | WP_031687202.1 | putative DNA binding domain-containing protein | - |
| PERCYII40_RS02980 () | 638650..641832 | + | 3183 | WP_003121823.1 | type I restriction endonuclease subunit R | - |
| PERCYII40_RS02985 () | 641909..642736 | + | 828 | WP_031687203.1 | hypothetical protein | - |
| PERCYII40_RS02990 () | 642739..643377 | + | 639 | WP_049955762.1 | hypothetical protein | - |
| PERCYII40_RS02995 () | 643927..644391 | - | 465 | WP_031687205.1 | DUF2384 domain-containing protein | - |
| PERCYII40_RS03000 () | 644400..644819 | - | 420 | WP_031687206.1 | hypothetical protein | - |
| PERCYII40_RS03005 () | 644871..645122 | - | 252 | WP_031687207.1 | hypothetical protein | - |
| PERCYII40_RS03010 () | 645115..645381 | - | 267 | WP_033868034.1 | hypothetical protein | - |
| PERCYII40_RS03015 () | 645381..645938 | - | 558 | WP_031687209.1 | recombinase family protein | - |
| PERCYII40_RS03020 () | 646091..646237 | + | 147 | Protein_601 | transposase | - |
| PERCYII40_RS03025 () | 646512..648254 | - | 1743 | WP_003121827.1 | NTPase KAP | - |
| PERCYII40_RS03035 () | 648995..649549 | - | 555 | WP_049955763.1 | hypothetical protein | - |
| PERCYII40_RS03040 () | 650772..651845 | - | 1074 | WP_003121829.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PERCYII40_RS03045 () | 652423..652605 | + | 183 | WP_019725766.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PERCYII40_RS03050 () | 652638..653060 | + | 423 | WP_019725767.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PERCYII40_RS03055 () | 653306..654277 | - | 972 | WP_033946036.1 | hypothetical protein | - |
| PERCYII40_RS03060 () | 654262..654954 | - | 693 | WP_033946051.1 | hypothetical protein | - |
| PERCYII40_RS03065 () | 654951..655493 | - | 543 | WP_025982284.1 | hypothetical protein | - |
| PERCYII40_RS03070 () | 655490..656413 | - | 924 | WP_033946052.1 | hypothetical protein | - |
| PERCYII40_RS03075 () | 656410..656886 | - | 477 | WP_033946054.1 | phage tail protein | - |
| PERCYII40_RS03080 () | 656883..659516 | - | 2634 | WP_079383073.1 | phage tail protein | - |
| PERCYII40_RS03085 () | 659526..660050 | - | 525 | WP_033946055.1 | phage tail protein | - |
| PERCYII40_RS03090 () | 660043..661215 | - | 1173 | WP_033946056.1 | baseplate J/gp47 family protein | - |
| PERCYII40_RS03095 () | 661212..661529 | - | 318 | WP_033946057.1 | DUF2590 family protein | - |
| PERCYII40_RS03100 () | 661526..663823 | - | 2298 | WP_174249855.1 | phage tail tape measure protein | - |
| PERCYII40_RS29890 () | 663927..664067 | - | 141 | WP_031631844.1 | hypothetical protein | - |
| PERCYII40_RS03105 () | 664091..664387 | - | 297 | WP_023107708.1 | hypothetical protein | - |
| PERCYII40_RS30020 () | 664384..664899 | - | 516 | WP_033946060.1 | lysis system i-spanin subunit Rz | - |
| PERCYII40_RS03115 () | 664896..665357 | - | 462 | WP_023122752.1 | lysozyme | - |
| PERCYII40_RS03120 () | 665354..665659 | - | 306 | WP_019725783.1 | hypothetical protein | - |
| PERCYII40_RS03125 () | 665656..665868 | - | 213 | WP_162288637.1 | TraR/DksA C4-type zinc finger protein | - |
| PERCYII40_RS03130 () | 665868..666317 | - | 450 | WP_023122750.1 | DUF2597 family protein | - |
| PERCYII40_RS03135 () | 666321..667436 | - | 1116 | WP_023107713.1 | DUF2586 family protein | - |
| PERCYII40_RS03140 () | 667448..668116 | - | 669 | WP_023126976.1 | hypothetical protein | - |
| PERCYII40_RS03145 () | 668109..668546 | - | 438 | WP_023122747.1 | phage tail protein | - |
| PERCYII40_RS03150 () | 668546..669007 | - | 462 | WP_033946064.1 | head completion/stabilization protein | - |
| PERCYII40_RS03155 () | 669105..669848 | - | 744 | WP_033945133.1 | terminase | - |
| PERCYII40_RS03160 () | 669845..670867 | - | 1023 | WP_012074147.1 | phage major capsid protein, P2 family | - |
| PERCYII40_RS03165 () | 670867..671820 | - | 954 | WP_019725791.1 | GPO family capsid scaffolding protein | - |
| PERCYII40_RS03170 () | 671978..674026 | + | 2049 | WP_121411715.1 | terminase family protein | - |
| PERCYII40_RS03175 () | 673938..674792 | + | 855 | WP_025297580.1 | phage portal protein | - |
| PERCYII40_RS03180 () | 674838..675098 | + | 261 | WP_023122741.1 | ogr/Delta-like zinc finger family protein | - |
| PERCYII40_RS03185 () | 675074..675283 | - | 210 | WP_012074151.1 | hypothetical protein | - |
| PERCYII40_RS03190 () | 675642..675923 | - | 282 | WP_033945127.1 | hypothetical protein | - |
| PERCYII40_RS03195 () | 675920..676150 | - | 231 | WP_012074153.1 | hypothetical protein | - |
| PERCYII40_RS03200 () | 676147..676362 | - | 216 | WP_012074154.1 | hypothetical protein | - |
| PERCYII40_RS29900 () | 676349..676762 | - | 414 | WP_025297579.1 | hypothetical protein | - |
| PERCYII40_RS03210 () | 676830..677186 | - | 357 | WP_012074155.1 | hypothetical protein | - |
| PERCYII40_RS03215 () | 677202..677603 | - | 402 | WP_012074156.1 | hypothetical protein | - |
| PERCYII40_RS03220 () | 677575..677775 | - | 201 | WP_012074157.1 | hypothetical protein | - |
| PERCYII40_RS03225 () | 678206..680899 | - | 2694 | WP_033945125.1 | toprim domain-containing protein | - |
| PERCYII40_RS03230 () | 680910..681152 | - | 243 | WP_012074159.1 | hypothetical protein | - |
| PERCYII40_RS03235 () | 681246..681482 | + | 237 | WP_012074160.1 | helix-turn-helix domain-containing protein | - |
| PERCYII40_RS03240 () | 681487..682569 | + | 1083 | Protein_645 | tyrosine-type recombinase/integrase | - |
| PERCYII40_RS03250 () | 682707..686444 | - | 3738 | WP_128654480.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|