MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 103298 bp
Accession: NZ_LR739068 Location: 5336104..5439401 Organism: Pseudomonas aeruginosa strain PcyII-29 isolate PcyII-29 Replicon: chromosome
Accession: NZ_LR739068 Location: 5336104..5439401 Organism: Pseudomonas aeruginosa strain PcyII-29 isolate PcyII-29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G3R42_RS24745 () | 5331730..5335875 | + | 4146 | WP_003103857.1 | two-partner secretion system exoprotein TpsA4 | - |
| G3R42_RS24750 () | 5336241..5337101 | + | 861 | WP_003158180.1 | ParA family protein | - |
| G3R42_RS24755 () | 5337103..5337828 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| G3R42_RS24760 () | 5337825..5338322 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| G3R42_RS24765 () | 5338328..5339074 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| G3R42_RS24770 () | 5339071..5339757 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| G3R42_RS24775 () | 5339757..5340458 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| G3R42_RS24780 () | 5340455..5341162 | + | 708 | WP_003103848.1 | HNH endonuclease | - |
| G3R42_RS24785 () | 5341146..5341364 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| G3R42_RS24790 () | 5341361..5342704 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| G3R42_RS24795 () | 5343143..5343589 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| G3R42_RS24800 () | 5343767..5343952 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| G3R42_RS24805 () | 5343942..5344469 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| G3R42_RS24810 () | 5344466..5344723 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| G3R42_RS24815 () | 5344716..5345213 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| G3R42_RS24820 () | 5345206..5345439 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| G3R42_RS24825 () | 5345439..5346455 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| G3R42_RS24830 () | 5346458..5346706 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| G3R42_RS24835 () | 5346703..5348436 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| G3R42_RS24840 () | 5348464..5349219 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| G3R42_RS24845 () | 5349222..5350547 | + | 1326 | WP_071534719.1 | hypothetical protein | - |
| G3R42_RS24850 () | 5351517..5351714 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| G3R42_RS24855 () | 5351870..5352598 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| G3R42_RS24860 () | 5352604..5353152 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| G3R42_RS24865 () | 5353199..5354038 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| G3R42_RS24870 () | 5354068..5354556 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| G3R42_RS24875 () | 5354664..5354909 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| G3R42_RS24880 () | 5354975..5355193 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| G3R42_RS24885 () | 5355393..5355653 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| G3R42_RS24890 () | 5355675..5356085 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| G3R42_RS24895 () | 5356085..5356315 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| G3R42_RS24900 () | 5356571..5358490 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| G3R42_RS24905 () | 5358798..5359007 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| G3R42_RS24910 () | 5359228..5361117 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| G3R42_RS24915 () | 5361114..5363087 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| G3R42_RS24920 () | 5363209..5363991 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| G3R42_RS24925 () | 5364024..5365277 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| G3R42_RS24930 () | 5365451..5366575 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| G3R42_RS24935 () | 5366575..5368284 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| G3R42_RS24940 () | 5368288..5369613 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| G3R42_RS24945 () | 5369603..5370136 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| G3R42_RS24950 () | 5370145..5371725 | + | 1581 | WP_003099761.1 | hypothetical protein | VF |
| G3R42_RS24955 () | 5371725..5372804 | + | 1080 | WP_003099764.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| G3R42_RS24960 () | 5372826..5373356 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| G3R42_RS24965 () | 5373353..5374309 | + | 957 | WP_003117051.1 | Twitching mobility protein | VF |
| G3R42_RS24970 () | 5374302..5375681 | + | 1380 | WP_003117053.1 | hypothetical protein | VF |
| G3R42_RS24975 () | 5375699..5376136 | + | 438 | WP_003117054.1 | hypothetical protein | VF |
| G3R42_RS30870 () | 5377199..5377444 | + | 246 | WP_003117055.1 | hypothetical protein | - |
| G3R42_RS30875 () | 5377519..5377692 | + | 174 | WP_003158172.1 | hypothetical protein | - |
| G3R42_RS24985 () | 5378153..5378632 | + | 480 | WP_003117056.1 | DUF3577 domain-containing protein | - |
| G3R42_RS30880 () | 5378770..5378928 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| G3R42_RS24990 () | 5379002..5379199 | + | 198 | WP_003117057.1 | hypothetical protein | - |
| G3R42_RS24995 () | 5379684..5380391 | + | 708 | WP_003117058.1 | hypothetical protein | - |
| G3R42_RS25000 () | 5380627..5380977 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| G3R42_RS25005 () | 5381034..5381666 | + | 633 | WP_003158170.1 | DUF3275 family protein | - |
| G3R42_RS25010 () | 5381663..5381938 | + | 276 | WP_003117060.1 | hypothetical protein | - |
| G3R42_RS25015 () | 5382008..5382370 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| G3R42_RS25020 () | 5382438..5382692 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| G3R42_RS25025 () | 5382785..5383390 | + | 606 | WP_003158169.1 | hypothetical protein | - |
| G3R42_RS25030 () | 5383420..5384865 | + | 1446 | WP_003158168.1 | class I SAM-dependent methyltransferase | - |
| G3R42_RS25035 () | 5384833..5385165 | - | 333 | WP_003158167.1 | hypothetical protein | - |
| G3R42_RS25040 () | 5385158..5385589 | - | 432 | WP_003158166.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| G3R42_RS25045 () | 5385694..5386377 | + | 684 | WP_003158165.1 | SOS response-associated peptidase family protein | - |
| G3R42_RS25050 () | 5387241..5387615 | + | 375 | WP_003158163.1 | hypothetical protein | - |
| G3R42_RS25055 () | 5387640..5388224 | + | 585 | WP_044265603.1 | hypothetical protein | - |
| G3R42_RS25060 () | 5388209..5388805 | + | 597 | WP_003158161.1 | VWA domain-containing protein | - |
| G3R42_RS25065 () | 5389357..5389749 | + | 393 | WP_003158160.1 | hypothetical protein | - |
| G3R42_RS25070 () | 5389768..5390091 | + | 324 | WP_003158159.1 | hypothetical protein | - |
| G3R42_RS25075 () | 5390918..5391190 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| G3R42_RS25080 () | 5391408..5392106 | + | 699 | WP_023094353.1 | hypothetical protein | - |
| G3R42_RS25085 () | 5392117..5392872 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| G3R42_RS25090 () | 5392857..5393438 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| G3R42_RS25095 () | 5393435..5393935 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| G3R42_RS25100 () | 5394007..5394213 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| G3R42_RS25105 () | 5394217..5396448 | + | 2232 | WP_003099821.1 | type IV conjugative transfer system coupling protein TraD | - |
| G3R42_RS25110 () | 5396448..5397194 | + | 747 | WP_003099824.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| G3R42_RS25115 () | 5397212..5397703 | + | 492 | WP_003099826.1 | hypothetical protein | - |
| G3R42_RS25120 () | 5397945..5399426 | + | 1482 | WP_003117073.1 | UvrD-helicase domain-containing protein | - |
| G3R42_RS25125 () | 5399558..5400667 | + | 1110 | WP_003121016.1 | hypothetical protein | - |
| G3R42_RS25130 () | 5400713..5401024 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| G3R42_RS25135 () | 5401197..5401496 | + | 300 | WP_003117075.1 | hypothetical protein | - |
| G3R42_RS25140 () | 5401590..5401928 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| G3R42_RS25145 () | 5401925..5402164 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| G3R42_RS25150 () | 5402182..5402538 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| G3R42_RS25155 () | 5402549..5402935 | + | 387 | WP_003158156.1 | TIGR03750 family conjugal transfer protein | - |
| G3R42_RS25160 () | 5402932..5403591 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| G3R42_RS25165 () | 5403588..5404472 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| G3R42_RS25170 () | 5404456..5405961 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| G3R42_RS25175 () | 5405939..5406382 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| G3R42_RS25180 () | 5406382..5409324 | + | 2943 | WP_015060177.1 | conjugative transfer ATPase | - |
| G3R42_RS25185 () | 5409321..5409605 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| G3R42_RS25190 () | 5409602..5410258 | + | 657 | WP_003158151.1 | DsbA family protein | - |
| G3R42_RS25195 () | 5410255..5410473 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| G3R42_RS25200 () | 5411032..5412219 | + | 1188 | WP_003159689.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| G3R42_RS25205 () | 5412242..5412664 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| G3R42_RS25210 () | 5412654..5413520 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| G3R42_RS25215 () | 5413658..5414089 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| G3R42_RS25220 () | 5414089..5415027 | + | 939 | WP_003158146.1 | TIGR03756 family integrating conjugative element protein | - |
| G3R42_RS25225 () | 5415045..5416427 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| G3R42_RS25230 () | 5416427..5416774 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| G3R42_RS25235 () | 5416771..5418306 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| G3R42_RS25240 () | 5418336..5418689 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| G3R42_RS25245 () | 5418808..5419080 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| G3R42_RS25250 () | 5419084..5419434 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| G3R42_RS25255 () | 5419812..5428325 | - | 8514 | WP_003125103.1 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| G3R42_RS25260 () | 5428890..5429153 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| G3R42_RS25265 () | 5429167..5429391 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| G3R42_RS25270 () | 5429597..5430325 | + | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| G3R42_RS25275 () | 5430396..5430758 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| G3R42_RS25280 () | 5430862..5431356 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| G3R42_RS25285 () | 5431465..5433483 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| G3R42_RS25290 () | 5433639..5434832 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| G3R42_RS25295 () | 5435220..5435576 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| G3R42_RS25300 () | 5435637..5435789 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| G3R42_RS25305 () | 5435788..5437707 | + | 1920 | WP_003158138.1 | helicase/relaxase domain-containing protein | - |
| G3R42_RS25310 () | 5437704..5438987 | + | 1284 | WP_003158137.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| G3R42_RS25330 () | 5439839..5442403 | - | 2565 | WP_003094682.1 | ATP-dependent chaperone ClpB | - |
| G3R42_RS25335 () | 5442559..5443287 | - | 729 | WP_003102588.1 | peptidoglycan editing factor PgeF | - |
| G3R42_RS25340 () | 5443284..5444246 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|