MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 65660 bp
Accession: NZ_LR738849 Location: 3196477..3262136 Organism: Desulfovibrio sp. 86 Replicon: chromosome
Accession: NZ_LR738849 Location: 3196477..3262136 Organism: Desulfovibrio sp. 86 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DESU86_RS13090 () | 3192686..3194011 | - | 1326 | WP_179981829.1 | AAA family ATPase | - |
| DESU86_RS13095 () | 3194478..3194696 | - | 219 | WP_179981374.1 | AlpA family phage regulatory protein | - |
| DESU86_RS13100 () | 3194820..3195821 | - | 1002 | WP_179981373.1 | hypothetical protein | - |
| DESU86_RS13105 () | 3195958..3196149 | - | 192 | WP_179981372.1 | hypothetical protein | - |
| DESU86_RS13110 () | 3196177..3197511 | - | 1335 | WP_179981371.1 | site-specific integrase | - |
| DESU86_RS13120 () | 3198340..3199542 | + | 1203 | WP_179981437.1 | helix-turn-helix domain-containing protein | - |
| DESU86_RS13125 () | 3199568..3200638 | + | 1071 | WP_179981438.1 | hypothetical protein | - |
| DESU86_RS13130 () | 3200635..3201750 | + | 1116 | WP_179981439.1 | hypothetical protein | VF |
| DESU86_RS13135 () | 3201754..3202260 | + | 507 | WP_179981440.1 | hypothetical protein | - |
| DESU86_RS13140 () | 3202275..3202673 | + | 399 | WP_179981441.1 | hypothetical protein | - |
| DESU86_RS13145 () | 3202686..3203423 | + | 738 | WP_179981442.1 | hypothetical protein | VF |
| DESU86_RS13150 () | 3203423..3206401 | + | 2979 | WP_179981443.1 | hypothetical protein | VF |
| DESU86_RS13155 () | 3206398..3207498 | + | 1101 | WP_179981444.1 | hypothetical protein | - |
| DESU86_RS13160 () | 3207529..3207852 | - | 324 | WP_179981445.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| DESU86_RS13165 () | 3207839..3208093 | - | 255 | WP_179981446.1 | hypothetical protein | Antitoxin Detail |
| DESU86_RS13170 () | 3208182..3210230 | + | 2049 | WP_179981447.1 | DotA/TraY family protein | - |
| DESU86_RS13175 () | 3210233..3210673 | + | 441 | WP_179981448.1 | hypothetical protein | - |
| DESU86_RS13180 () | 3210641..3210943 | - | 303 | WP_179981449.1 | hypothetical protein | - |
| DESU86_RS13185 () | 3210933..3211715 | - | 783 | WP_179981450.1 | Chromosome partitioning protein ParA | VF |
| DESU86_RS13190 () | 3211849..3212319 | + | 471 | WP_179981451.1 | DotD/TraH family lipoprotein | - |
| DESU86_RS13195 () | 3212316..3213272 | + | 957 | WP_179981452.1 | hypothetical protein | VF |
| DESU86_RS13200 () | 3213276..3214427 | + | 1152 | WP_179981453.1 | putative protein YggR | VF |
| DESU86_RS13205 () | 3214424..3214696 | + | 273 | WP_179981454.1 | hypothetical protein | VF |
| DESU86_RS13210 () | 3214752..3214964 | + | 213 | WP_179981455.1 | hypothetical protein | - |
| DESU86_RS13215 () | 3214961..3216358 | + | 1398 | WP_179981456.1 | DUF1738 domain-containing protein | - |
| DESU86_RS13220 () | 3216361..3218385 | + | 2025 | WP_179981457.1 | type I DNA topoisomerase | - |
| DESU86_RS13225 () | 3218382..3218792 | + | 411 | WP_179981458.1 | hypothetical protein | - |
| DESU86_RS13230 () | 3218789..3219328 | + | 540 | WP_179981459.1 | hypothetical protein | VF |
| DESU86_RS13235 () | 3219325..3220608 | + | 1284 | WP_179981460.1 | hypothetical protein | - |
| DESU86_RS13240 () | 3220619..3222397 | + | 1779 | WP_179981461.1 | hypothetical protein | VF |
| DESU86_RS13245 () | 3222465..3223142 | + | 678 | WP_179981462.1 | hypothetical protein | - |
| DESU86_RS13250 () | 3223226..3223423 | + | 198 | WP_197957568.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| DESU86_RS13255 () | 3223553..3223873 | + | 321 | WP_179981463.1 | hypothetical protein | - |
| DESU86_RS13260 () | 3223969..3229083 | + | 5115 | WP_179981835.1 | DEAD/DEAH box helicase family protein | - |
| DESU86_RS13265 () | 3229049..3229321 | - | 273 | WP_179981464.1 | HU family DNA-binding protein | - |
| DESU86_RS13270 () | 3229631..3230008 | - | 378 | WP_179981465.1 | hypothetical protein | - |
| DESU86_RS13275 () | 3230480..3230851 | + | 372 | WP_179981466.1 | helix-turn-helix domain-containing protein | - |
| DESU86_RS13280 () | 3231280..3232011 | - | 732 | WP_179981467.1 | hypothetical protein | - |
| DESU86_RS13285 () | 3232001..3232783 | - | 783 | WP_179981468.1 | hypothetical protein | - |
| DESU86_RS13290 () | 3232937..3235243 | - | 2307 | WP_179981469.1 | relaxase/mobilization nuclease domain-containing protein | - |
| DESU86_RS13295 () | 3235240..3235581 | - | 342 | WP_179981470.1 | hypothetical protein | - |
| DESU86_RS13300 () | 3235798..3236151 | + | 354 | WP_179981471.1 | hypothetical protein | - |
| DESU86_RS13305 () | 3236379..3237827 | - | 1449 | WP_197957569.1 | UvrD-helicase domain-containing protein | - |
| DESU86_RS13310 () | 3238049..3239089 | - | 1041 | WP_072312028.1 | IS481 family transposase ISShes15 | Transposase |
| DESU86_RS13315 () | 3239195..3239461 | - | 267 | WP_179981837.1 | AAA family ATPase | - |
| DESU86_RS13320 () | 3239448..3240188 | - | 741 | WP_197957570.1 | hypothetical protein | - |
| DESU86_RS13325 () | 3240252..3241421 | - | 1170 | Protein_2615 | ISL3 family transposase ISKox3 | Transposase |
| DESU86_RS13330 () | 3241564..3242172 | + | 609 | WP_004393990.1 | TetR/AcrR family transcriptional regulator | - |
| DESU86_RS13335 () | 3242169..3243320 | + | 1152 | WP_003056109.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DESU86_RS13340 () | 3243317..3244519 | + | 1203 | WP_094197185.1 | ABC transporter permease | - |
| DESU86_RS13345 () | 3244524..3245234 | + | 711 | WP_048607673.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| DESU86_RS13350 () | 3245263..3245736 | + | 474 | WP_179981472.1 | cytochrome c | - |
| DESU86_RS13355 () | 3245723..3247210 | + | 1488 | WP_048607676.1 | Toluene efflux pump outer membrane protein TtgC | VF |
| DESU86_RS13360 () | 3247341..3247898 | + | 558 | WP_001162010.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| DESU86_RS13365 () | 3247901..3250873 | + | 2973 | WP_179981473.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| DESU86_RS13370 () | 3251012..3252121 | - | 1110 | WP_179981474.1 | AAA family ATPase | - |
| DESU86_RS13375 () | 3252144..3254978 | - | 2835 | WP_179981475.1 | ATP-binding protein | - |
| DESU86_RS13380 () | 3254978..3255487 | - | 510 | WP_179981476.1 | hypothetical protein | - |
| DESU86_RS13385 () | 3255492..3256526 | - | 1035 | WP_179981477.1 | ATP-binding protein | - |
| DESU86_RS13390 () | 3256541..3259435 | - | 2895 | WP_179981478.1 | DUF1156 domain-containing protein | - |
| DESU86_RS13395 () | 3259439..3260092 | - | 654 | WP_179981479.1 | DUF4145 domain-containing protein | - |
| DESU86_RS13400 () | 3260117..3263668 | - | 3552 | WP_179981480.1 | DUF3883 domain-containing protein | - |
| DESU86_RS13405 () | 3263821..3263937 | - | 117 | WP_179981481.1 | UvrD-helicase domain-containing protein | - |
| DESU86_RS13410 () | 3264248..3264400 | + | 153 | WP_179981482.1 | hypothetical protein | - |
| DESU86_RS13415 () | 3264384..3264659 | + | 276 | WP_179981483.1 | helix-turn-helix domain-containing protein | - |
| DESU86_RS13420 () | 3264916..3266109 | + | 1194 | WP_179981484.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|