MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 112896 bp
Accession: NZ_LR738720 Location: 659972..772867 Organism: Streptococcus suis isolate GD-0001 Replicon: chromosome
Accession: NZ_LR738720 Location: 659972..772867 Organism: Streptococcus suis isolate GD-0001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPW48_RS03515 () | 655274..655648 | - | 375 | WP_012775014.1 | GntR family transcriptional regulator | - |
| GPW48_RS03520 () | 655802..658912 | + | 3111 | WP_074390137.1 | DNA polymerase III subunit alpha | - |
| GPW48_RS03525 () | 658997..660007 | + | 1011 | WP_002940961.1 | 6-phosphofructokinase | - |
| GPW48_RS03530 () | 660074..661579 | + | 1506 | WP_024379423.1 | pyruvate kinase | - |
| GPW48_RS03535 () | 661740..664952 | + | 3213 | WP_074390138.1 | IgM protease | VF |
| GPW48_RS03540 () | 665280..666389 | - | 1110 | WP_014638276.1 | FAD-binding oxidoreductase | - |
| GPW48_RS03545 () | 666474..667091 | + | 618 | WP_014736041.1 | esterase | - |
| GPW48_RS03550 () | 667134..667676 | + | 543 | WP_014736040.1 | signal peptidase I | - |
| GPW48_RS03555 () | 667868..669682 | + | 1815 | WP_074390139.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
| GPW48_RS03560 () | 669838..671601 | + | 1764 | WP_074390140.1 | PTS mannitol transporter subunit IICB | - |
| GPW48_RS03565 () | 671631..673583 | + | 1953 | WP_074390141.1 | BglG family transcription antiterminator | - |
| GPW48_RS03570 () | 673585..674022 | + | 438 | WP_074390142.1 | PTS sugar transporter subunit IIA | - |
| GPW48_RS03575 () | 674036..675172 | + | 1137 | WP_074390143.1 | mannitol-1-phosphate 5-dehydrogenase | - |
| GPW48_RS03580 () | 675621..676262 | + | 642 | WP_002940990.1 | amino acid ABC transporter permease | - |
| GPW48_RS03585 () | 676272..676904 | + | 633 | WP_002940998.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| GPW48_RS03590 () | 676931..677761 | + | 831 | WP_171840861.1 | transporter substrate-binding domain-containing protein | - |
| GPW48_RS03595 () | 678228..679391 | - | 1164 | WP_156688692.1 | IS110 family transposase ISAzo28 | Transposase |
| GPW48_RS03600 () | 680674..681312 | - | 639 | WP_011922101.1 | MBL fold metallo-hydrolase | - |
| GPW48_RS03605 () | 681375..683888 | + | 2514 | WP_171840868.1 | bifunctional DnaQ family exonuclease/ATP-dependent helicase | - |
| GPW48_RS03610 () | 684048..685124 | + | 1077 | WP_074390225.1 | glutamate 5-kinase | - |
| GPW48_RS03615 () | 685189..686427 | + | 1239 | WP_011922104.1 | glutamate-5-semialdehyde dehydrogenase | - |
| GPW48_RS03620 () | 686437..687222 | + | 786 | WP_011922105.1 | pyrroline-5-carboxylate reductase | - |
| GPW48_RS03625 () | 687245..687649 | - | 405 | WP_011922106.1 | TetR/AcrR family transcriptional regulator | - |
| GPW48_RS03630 () | 687776..688627 | + | 852 | WP_002938910.1 | DegV family protein | - |
| GPW48_RS03635 () | 688726..689985 | - | 1260 | WP_011922108.1 | PLP-dependent aminotransferase family protein | - |
| GPW48_RS03640 () | 690108..690842 | + | 735 | WP_012775019.1 | peroxide stress protein YaaA | - |
| GPW48_RS03645 () | 690947..692392 | + | 1446 | WP_012775020.1 | Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU | VF |
| GPW48_RS03650 () | 692410..693099 | + | 690 | WP_074390224.1 | putative capsular polysaccharide biosynthesis protein YwqC | VF |
| GPW48_RS03655 () | 693109..693786 | + | 678 | WP_012775429.1 | Tyrosine-protein kinase CpsD | VF |
| GPW48_RS03660 () | 693825..694556 | + | 732 | WP_002936359.1 | Tyrosine-protein phosphatase CpsB | VF |
| GPW48_RS03665 () | 694581..695960 | + | 1380 | WP_002936357.1 | hypothetical protein | VF |
| GPW48_RS03670 () | 695995..697164 | + | 1170 | WP_011922115.1 | glycosyltransferase family 1 protein | - |
| GPW48_RS03675 () | 697168..698325 | + | 1158 | WP_002936352.1 | glycosyltransferase family 4 protein | - |
| GPW48_RS03680 () | 698639..700084 | + | 1446 | WP_011922116.1 | glycosyltransferase family 2 protein | - |
| GPW48_RS03685 () | 700152..701351 | + | 1200 | WP_074390223.1 | polymerase | - |
| GPW48_RS03690 () | 701490..702488 | + | 999 | WP_074390222.1 | hypothetical protein | VF |
| GPW48_RS03695 () | 702481..703485 | + | 1005 | WP_011922118.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| GPW48_RS03700 () | 703525..703836 | + | 312 | WP_009909574.1 | hypothetical protein | - |
| GPW48_RS03715 () | 704712..704969 | + | 258 | WP_079394833.1 | N-acylneuraminate cytidylyltransferase | VF |
| GPW48_RS03720 () | 705328..706299 | + | 972 | WP_011922741.1 | hypothetical protein | VF |
| GPW48_RS03725 () | 706308..707714 | + | 1407 | WP_002936324.1 | hypothetical protein | VF |
| GPW48_RS03730 () | 708237..709253 | + | 1017 | WP_002936321.1 | N,N'-diacetyllegionaminic acid synthase | VF |
| GPW48_RS03735 () | 709265..710398 | + | 1134 | WP_009909585.1 | Polysialic acid biosynthesis protein P7 | VF |
| GPW48_RS03740 () | 710388..711038 | + | 651 | WP_011922122.1 | Putative acetyltransferase EpsM | VF |
| GPW48_RS03745 () | 711047..712279 | + | 1233 | WP_012775023.1 | N-acylneuraminate cytidylyltransferase | VF |
| GPW48_RS03750 () | 712476..713349 | + | 874 | Protein_680 | IS5 family transposase ISSth7 | Transposase |
| GPW48_RS03755 () | 713599..714447 | + | 849 | WP_074390220.1 | IS630 family transposase ISSsu3 | Transposase |
| GPW48_RS03760 () | 714484..714669 | + | 186 | WP_014635926.1 | hypothetical protein | - |
| GPW48_RS03765 () | 714650..714937 | + | 288 | WP_011922127.1 | IS66 family transposase ISDeal1 | Transposase |
| GPW48_RS03770 () | 715054..715260 | + | 207 | WP_002936301.1 | IS66 family transposase ISBthe6 | Transposase |
| GPW48_RS03775 () | 715214..716546 | + | 1333 | Protein_685 | IS66 family transposase ISSwo2 | Transposase |
| GPW48_RS03780 () | 716753..717571 | + | 819 | Protein_686 | IS30 family transposase ISSpn8 | Transposase |
| GPW48_RS03785 () | 717931..718538 | - | 608 | Protein_687 | tyrosine-type recombinase/integrase | - |
| GPW48_RS03790 () | 718939..719193 | + | 255 | WP_014636268.1 | hypothetical protein | - |
| GPW48_RS03795 () | 719212..719592 | + | 381 | WP_014636269.1 | hypothetical protein | - |
| GPW48_RS03800 () | 719696..719935 | + | 240 | WP_074390219.1 | hypothetical protein | - |
| GPW48_RS03805 () | 719930..722287 | - | 2358 | WP_012775024.1 | hypothetical protein | - |
| GPW48_RS03810 () | 722504..723784 | + | 1281 | WP_012775025.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| GPW48_RS03815 () | 723793..724284 | + | 492 | WP_011922141.1 | shikimate kinase | - |
| GPW48_RS03820 () | 724275..725102 | + | 828 | WP_009909609.1 | prephenate dehydratase | - |
| GPW48_RS03825 () | 725114..726439 | + | 1326 | WP_011922144.1 | LCP family protein | - |
| GPW48_RS03830 () | 726505..726903 | + | 399 | Protein_696 | class I SAM-dependent RNA methyltransferase | - |
| GPW48_RS03835 () | 727154..727327 | + | 174 | WP_032510356.1 | hypothetical protein | - |
| GPW48_RS03840 () | 727324..728142 | + | 819 | WP_074390218.1 | replication initiator protein A | - |
| GPW48_RS03850 () | 728291..729646 | + | 1356 | WP_074390217.1 | DNA (cytosine-5-)-methyltransferase | - |
| GPW48_RS03855 () | 729630..730058 | + | 429 | WP_011922469.1 | hypothetical protein | - |
| GPW48_RS03860 () | 730069..730452 | + | 384 | WP_074390216.1 | hypothetical protein | - |
| GPW48_RS03865 () | 730461..730694 | + | 234 | WP_024390011.1 | hypothetical protein | - |
| GPW48_RS03870 () | 730697..731281 | + | 585 | WP_074390215.1 | CPBP family intramembrane metalloprotease | - |
| GPW48_RS03875 () | 731359..731847 | + | 489 | WP_074390214.1 | hypothetical protein | - |
| GPW48_RS03880 () | 731847..733664 | + | 1818 | WP_074390213.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GPW48_RS03885 () | 733682..733924 | + | 243 | WP_001072182.1 | hypothetical protein | - |
| GPW48_RS03890 () | 733943..734797 | + | 855 | WP_074390212.1 | conjugal transfer protein TrbL | - |
| GPW48_RS03895 () | 734859..735212 | + | 354 | WP_001097579.1 | PrgI family protein | - |
| GPW48_RS03900 () | 735169..737520 | + | 2352 | WP_171840867.1 | AAA family ATPase | - |
| GPW48_RS03905 () | 737522..740323 | + | 2802 | WP_074390210.1 | CHAP domain-containing protein | - |
| GPW48_RS03910 () | 740386..741231 | - | 846 | WP_074390209.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| GPW48_RS03915 () | 741228..741818 | - | 591 | WP_000037239.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| GPW48_RS03925 () | 742096..746991 | + | 4896 | WP_074390207.1 | hypothetical protein | VF |
| GPW48_RS03930 () | 746992..747183 | + | 192 | WP_074390206.1 | calcium-binding protein | - |
| GPW48_RS03935 () | 747167..747718 | + | 552 | WP_074390205.1 | hypothetical protein | - |
| GPW48_RS03940 () | 747767..753715 | + | 5949 | WP_074390204.1 | DEAD/DEAH box helicase family protein | - |
| GPW48_RS03945 () | 753696..754070 | + | 375 | WP_001140406.1 | TnpV protein | - |
| GPW48_RS03950 () | 754437..756356 | + | 1920 | WP_074390203.1 | tetracycline resistance ribosomal protection protein Tet(O) | VF |
| GPW48_RS03955 () | 756408..756581 | + | 174 | WP_074390202.1 | cysteine-rich KTR domain-containing protein | - |
| GPW48_RS03970 () | 757071..757580 | + | 510 | WP_000872511.1 | hypothetical protein | VF |
| GPW48_RS03975 () | 757675..758100 | + | 426 | WP_000323896.1 | sigma-70 family RNA polymerase sigma factor | - |
| GPW48_RS03980 () | 758184..758657 | + | 474 | WP_000323521.1 | sigma-70 family RNA polymerase sigma factor | - |
| GPW48_RS03985 () | 758811..759842 | + | 1032 | WP_001170965.1 | AAA family ATPase | - |
| GPW48_RS03990 () | 760361..761326 | + | 966 | WP_001145977.1 | plasmid recombination protein | - |
| GPW48_RS03995 () | 761334..762188 | + | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
| GPW48_RS04000 () | 762265..762495 | + | 231 | WP_000659121.1 | hypothetical protein | - |
| GPW48_RS04005 () | 762566..762757 | + | 192 | WP_000503424.1 | hypothetical protein | - |
| GPW48_RS04010 () | 762811..763911 | + | 1101 | Protein_728 | IS607 family transposase ISTsi1 | Transposase |
| GPW48_RS04015 () | 764003..764242 | + | 240 | WP_000635249.1 | peptide-binding protein | - |
| GPW48_RS04020 () | 764291..764344 | + | 54 | WP_117115223.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| GPW48_RS04025 () | 764499..765236 | + | 738 | WP_001038795.1 | rRNA adenine N-6-methyltransferase | ARG |
| GPW48_RS04035 () | 765406..765666 | + | 261 | Protein_732 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| GPW48_RS04040 () | 765769..766665 | + | 897 | WP_002326827.1 | ParA family protein | - |
| GPW48_RS04045 () | 766763..766972 | + | 210 | WP_000527318.1 | peptide-binding protein | - |
| GPW48_RS04050 () | 766990..767262 | + | 273 | WP_002326825.1 | antitoxin | Antitoxin Detail |
| GPW48_RS04055 () | 767264..767533 | + | 270 | WP_002943355.1 | zeta toxin family protein | Toxin Detail |
| GPW48_RS04060 () | 767631..767952 | + | 322 | Protein_737 | DUF4368 domain-containing protein | - |
| GPW48_RS04065 () | 767945..768904 | + | 960 | Protein_738 | hypothetical protein | - |
| GPW48_RS04070 () | 768975..769274 | + | 300 | WP_024401832.1 | hypothetical protein | - |
| GPW48_RS04075 () | 769288..769578 | + | 291 | WP_002935084.1 | hypothetical protein | - |
| GPW48_RS04080 () | 769674..770312 | + | 639 | WP_002936427.1 | hypothetical protein | - |
| GPW48_RS04085 () | 770351..771427 | + | 1077 | WP_074390201.1 | toprim domain-containing protein | - |
| GPW48_RS04090 () | 771481..771708 | + | 228 | WP_000110921.1 | hypothetical protein | - |
| GPW48_RS04095 () | 771705..772094 | + | 390 | WP_074390200.1 | chemotaxis protein | - |
| GPW48_RS04100 () | 772144..772434 | + | 291 | WP_000667953.1 | hypothetical protein | - |
| GPW48_RS04105 () | 772504..772980 | + | 477 | WP_024415699.1 | helix-turn-helix domain-containing protein | - |
| GPW48_RS04110 () | 772980..773768 | + | 789 | WP_074390198.1 | zeta toxin family protein | - |
| GPW48_RS04115 () | 773758..775512 | + | 1755 | WP_032458610.1 | AAA family ATPase | - |
| GPW48_RS04120 () | 775505..777046 | + | 1542 | WP_024383488.1 | ATP-dependent helicase | - |
| GPW48_RS04125 () | 777043..777635 | + | 593 | Protein_750 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|