MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 150524 bp
Accession: NZ_LR699010 Location: 999500..1150023 Organism: Lachnoanaerobaculum umeaense isolate MGYG-HGUT-02522 Replicon: chromosome
Accession: NZ_LR699010 Location: 999500..1150023 Organism: Lachnoanaerobaculum umeaense isolate MGYG-HGUT-02522 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FX093_RS04535 () | 995262..997868 | + | 2607 | WP_111525362.1 | hypothetical protein | - |
| FX093_RS04540 () | 998149..999192 | + | 1044 | WP_111525363.1 | DUF1307 domain-containing protein | - |
| FX093_RS04545 () | 999347..1001083 | + | 1737 | WP_111525364.1 | hypothetical protein | - |
| FX093_RS04550 () | 1001104..1002381 | + | 1278 | WP_111525365.1 | hypothetical protein | - |
| FX093_RS04555 () | 1002391..1003014 | + | 624 | WP_111525366.1 | response regulator transcription factor | - |
| FX093_RS04560 () | 1003083..1003559 | - | 477 | WP_111525367.1 | RNHCP domain-containing protein | - |
| FX093_RS04565 () | 1003779..1004585 | + | 807 | WP_111525368.1 | hypothetical protein | VF |
| FX093_RS04570 () | 1004648..1005898 | - | 1251 | WP_111525369.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| FX093_RS04575 () | 1005912..1007003 | - | 1092 | WP_111525370.1 | prephenate dehydrogenase | - |
| FX093_RS04580 () | 1007306..1009408 | + | 2103 | WP_111525371.1 | Elongation factor G | VF |
| FX093_RS04585 () | 1009553..1010227 | + | 675 | WP_111525372.1 | sortase B protein-sorting domain-containing protein | - |
| FX093_RS04590 () | 1010442..1011965 | + | 1524 | WP_111525373.1 | 4Fe-4S dicluster domain-containing protein | - |
| FX093_RS04595 () | 1012107..1014155 | + | 2049 | WP_111525374.1 | molecular chaperone HtpG | - |
| FX093_RS04600 () | 1014224..1014637 | - | 414 | WP_111525375.1 | TOBE domain-containing protein | - |
| FX093_RS04605 () | 1014899..1015741 | + | 843 | WP_111525376.1 | DegV family protein | - |
| FX093_RS04610 () | 1015869..1017155 | + | 1287 | WP_111525377.1 | galactokinase | - |
| FX093_RS04615 () | 1017165..1017521 | + | 357 | WP_111525378.1 | DUF4190 domain-containing protein | - |
| FX093_RS04620 () | 1017536..1017988 | + | 453 | WP_111525379.1 | transcriptional regulator NrdR | - |
| FX093_RS04625 () | 1017993..1018502 | + | 510 | WP_111525380.1 | YqeG family HAD IIIA-type phosphatase | - |
| FX093_RS04630 () | 1018499..1019368 | + | 870 | WP_111525381.1 | shikimate dehydrogenase | - |
| FX093_RS04635 () | 1019365..1019802 | + | 438 | WP_111525382.1 | type II 3-dehydroquinate dehydratase | - |
| FX093_RS04640 () | 1019867..1020427 | + | 561 | WP_111525383.1 | elongation factor P | - |
| FX093_RS04645 () | 1020513..1022282 | + | 1770 | WP_111525384.1 | arginine--tRNA ligase | - |
| FX093_RS04650 () | 1022745..1024091 | + | 1347 | WP_111525385.1 | electron transport complex subunit RsxC | - |
| FX093_RS04655 () | 1024091..1025050 | + | 960 | WP_111525386.1 | RnfABCDGE type electron transport complex subunit D | - |
| FX093_RS04660 () | 1025047..1025658 | + | 612 | WP_111525387.1 | RnfABCDGE type electron transport complex subunit G | - |
| FX093_RS04665 () | 1025668..1026492 | + | 825 | WP_111525388.1 | electron transport complex subunit E | - |
| FX093_RS04670 () | 1026492..1027067 | + | 576 | WP_111525389.1 | electron transport complex subunit RsxA | - |
| FX093_RS04675 () | 1027079..1027894 | + | 816 | WP_111525390.1 | RnfABCDGE type electron transport complex subunit B | - |
| FX093_RS04680 () | 1028779..1031892 | + | 3114 | WP_111525391.1 | isoleucine--tRNA ligase | - |
| FX093_RS04685 () | 1031904..1034360 | + | 2457 | WP_111525392.1 | glycogen/starch/alpha-glucan phosphorylase | - |
| FX093_RS04690 () | 1034350..1035144 | + | 795 | WP_111525393.1 | Cof-type HAD-IIB family hydrolase | - |
| FX093_RS04695 () | 1035244..1037022 | + | 1779 | WP_111525394.1 | aminopeptidase P family protein | - |
| FX093_RS04700 () | 1036992..1038446 | + | 1455 | WP_111525395.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| FX093_RS04710 () | 1038719..1038991 | + | 273 | WP_111525397.1 | hypothetical protein | - |
| FX093_RS04715 () | 1039129..1039773 | - | 645 | Protein_922 | IS21 family transposase ISCbo2 | Transposase |
| FX093_RS04720 () | 1040071..1040940 | - | 870 | WP_111525399.1 | IS21 family transposase ISCbo2 | Transposase |
| FX093_RS04725 () | 1041069..1041152 | - | 84 | Protein_924 | transposase | - |
| FX093_RS04730 () | 1041267..1041866 | + | 600 | WP_111525400.1 | abortive infection protein | - |
| FX093_RS04735 () | 1041863..1042715 | + | 853 | Protein_926 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| FX093_RS04740 () | 1042810..1042884 | - | 75 | Protein_927 | relaxase | - |
| FX093_RS04745 () | 1043061..1043633 | + | 573 | WP_111525401.1 | TetR/AcrR family transcriptional regulator | - |
| FX093_RS04750 () | 1043737..1045455 | + | 1719 | Protein_929 | Vitamin B12 import ATP-binding protein BtuD | VF |
| FX093_RS04755 () | 1045805..1047514 | + | 1710 | WP_111525402.1 | Putative multidrug export ATP-binding/permease protein | VF |
| FX093_RS04760 () | 1047517..1049034 | + | 1518 | WP_111525403.1 | Putative HMP/thiamine import ATP-binding protein YkoD | VF |
| FX093_RS04765 () | 1049024..1049728 | + | 705 | WP_111525404.1 | energy-coupling factor transporter transmembrane protein EcfT | - |
| FX093_RS04770 () | 1049738..1050322 | + | 585 | WP_111525405.1 | MptD family putative ECF transporter S component | - |
| FX093_RS04775 () | 1050572..1050981 | + | 410 | Protein_934 | sigma-70 family RNA polymerase sigma factor | - |
| FX093_RS04780 () | 1051259..1051843 | + | 585 | Protein_935 | putative DNA binding domain-containing protein | - |
| FX093_RS04785 () | 1051928..1052986 | - | 1059 | WP_111526138.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| FX093_RS04790 () | 1053433..1054026 | - | 594 | WP_111526111.1 | helix-turn-helix domain-containing protein | - |
| FX093_RS04795 () | 1054188..1054382 | + | 195 | WP_111526112.1 | helix-turn-helix domain-containing protein | - |
| FX093_RS04800 () | 1054500..1054691 | + | 192 | WP_111526115.1 | hypothetical protein | - |
| FX093_RS04805 () | 1054704..1056902 | + | 2199 | WP_111526113.1 | DNA primase | - |
| FX093_RS04810 () | 1057364..1057627 | + | 264 | WP_111526114.1 | hypothetical protein | - |
| FX093_RS13070 () | 1057632..1057781 | + | 150 | WP_162902545.1 | hypothetical protein | - |
| FX093_RS04815 () | 1057784..1058128 | + | 345 | WP_119808260.1 | hypothetical protein | - |
| FX093_RS13075 () | 1058100..1058273 | + | 174 | WP_162902539.1 | hypothetical protein | - |
| FX093_RS04820 () | 1058820..1059221 | + | 402 | WP_111526123.1 | phage scaffolding protein | - |
| FX093_RS04825 () | 1059240..1060091 | + | 852 | WP_111526122.1 | hypothetical protein | - |
| FX093_RS04830 () | 1060175..1060696 | + | 522 | WP_111526121.1 | hypothetical protein | - |
| FX093_RS04835 () | 1060800..1061750 | + | 951 | Protein_948 | AAA family ATPase | - |
| FX093_RS04840 () | 1061833..1062585 | + | 753 | Protein_949 | conjugal transfer protein | - |
| FX093_RS04845 () | 1062896..1063795 | + | 900 | WP_111525509.1 | YafY family transcriptional regulator | - |
| FX093_RS04850 () | 1063859..1064473 | + | 615 | WP_111525510.1 | GyrI-like domain-containing protein | - |
| FX093_RS04855 () | 1064486..1065028 | + | 543 | WP_111525511.1 | ClbS/DfsB family four-helix bundle protein | - |
| FX093_RS04870 () | 1065854..1066240 | + | 387 | WP_111525512.1 | DUF2075 domain-containing protein | - |
| FX093_RS04875 () | 1066227..1067177 | + | 951 | WP_111525513.1 | (deoxy)nucleoside triphosphate pyrophosphohydrolase | - |
| FX093_RS04880 () | 1067721..1068017 | + | 297 | WP_111525514.1 | hypothetical protein | - |
| FX093_RS04885 () | 1068278..1069453 | + | 1176 | WP_111525515.1 | TerD domain-containing protein | - |
| FX093_RS04895 () | 1069602..1070465 | + | 864 | WP_162902546.1 | leucine-rich repeat domain-containing protein | - |
| FX093_RS04900 () | 1070956..1072053 | + | 1098 | WP_111525517.1 | DUF2974 domain-containing protein | - |
| FX093_RS04905 () | 1072143..1073345 | + | 1203 | WP_111525518.1 | tetratricopeptide repeat protein | - |
| FX093_RS04910 () | 1073387..1076446 | + | 3060 | WP_111525519.1 | hypothetical protein | - |
| FX093_RS04915 () | 1076613..1077422 | + | 810 | WP_111525520.1 | hypothetical protein | - |
| FX093_RS04920 () | 1077419..1078417 | + | 999 | WP_111525521.1 | hypothetical protein | - |
| FX093_RS04925 () | 1078466..1079047 | + | 582 | WP_111525522.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| FX093_RS04930 () | 1079059..1080324 | + | 1266 | WP_111525523.1 | type IV secretory system conjugative DNA transfer family protein | - |
| FX093_RS13080 () | 1080349..1080516 | + | 168 | WP_162902547.1 | hypothetical protein | - |
| FX093_RS04935 () | 1080613..1081890 | + | 1278 | WP_111525524.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| FX093_RS04940 () | 1081910..1083406 | + | 1497 | WP_111525525.1 | carboxypeptidase M32 | - |
| FX093_RS04950 () | 1083894..1084496 | + | 603 | WP_111525541.1 | DUF1819 family protein | - |
| FX093_RS04955 () | 1084496..1085074 | + | 579 | WP_172621791.1 | DUF1788 domain-containing protein | - |
| FX093_RS04960 () | 1085086..1088739 | + | 3654 | WP_111525527.1 | BREX system P-loop protein BrxC | - |
| FX093_RS04965 () | 1088785..1092459 | + | 3675 | WP_111525528.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| FX093_RS04970 () | 1092642..1093262 | + | 621 | WP_111525529.1 | hypothetical protein | - |
| FX093_RS04975 () | 1093246..1095405 | + | 2160 | WP_162902548.1 | DEAD/DEAH box helicase | - |
| FX093_RS04980 () | 1095395..1097968 | + | 2574 | WP_162902549.1 | ATP-binding protein | - |
| FX093_RS04985 () | 1097987..1101862 | + | 3876 | WP_111525532.1 | hypothetical protein | - |
| FX093_RS04990 () | 1102258..1102524 | + | 267 | WP_111525533.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FX093_RS04995 () | 1102527..1102808 | + | 282 | WP_111525534.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| FX093_RS05000 () | 1102860..1103147 | + | 288 | Protein_978 | BREX-1 system phosphatase PglZ type A | - |
| FX093_RS05005 () | 1103310..1104563 | + | 1254 | WP_111525535.1 | radical SAM protein | - |
| FX093_RS05010 () | 1104629..1105978 | + | 1350 | WP_111525536.1 | serpin family protein | - |
| FX093_RS05015 () | 1106288..1106701 | + | 414 | WP_111525537.1 | hypothetical protein | - |
| FX093_RS05020 () | 1106881..1107147 | + | 267 | WP_111525538.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| FX093_RS05030 () | 1107275..1109785 | + | 2511 | WP_119808262.1 | BREX-1 system phosphatase PglZ type A | - |
| FX093_RS05035 () | 1109822..1110181 | + | 360 | WP_111525539.1 | hypothetical protein | - |
| FX093_RS05040 () | 1110151..1110897 | + | 747 | WP_146247004.1 | hypothetical protein | - |
| FX093_RS05045 () | 1111173..1111439 | + | 267 | Protein_986 | DUF3841 domain-containing protein | - |
| FX093_RS13085 () | 1111440..1111610 | + | 171 | WP_162902550.1 | hypothetical protein | - |
| FX093_RS05050 () | 1111676..1113430 | + | 1755 | WP_119808264.1 | IS1182 family transposase ISCpe5 | Transposase |
| FX093_RS05055 () | 1113615..1115240 | - | 1626 | WP_111525990.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| FX093_RS05060 () | 1115625..1116161 | + | 537 | WP_111525989.1 | DUF3841 domain-containing protein | - |
| FX093_RS05065 () | 1116194..1116880 | + | 687 | WP_111525988.1 | alpha/beta hydrolase | - |
| FX093_RS05070 () | 1117089..1117406 | + | 318 | WP_111525987.1 | thioredoxin family protein | - |
| FX093_RS05075 () | 1117414..1117668 | + | 255 | Protein_993 | Fic family protein | - |
| FX093_RS05080 () | 1117677..1118276 | + | 600 | WP_111525986.1 | DUF1851 domain-containing protein | - |
| FX093_RS05085 () | 1118338..1119123 | - | 786 | WP_111525985.1 | CoA activase | - |
| FX093_RS05090 () | 1119144..1120292 | - | 1149 | WP_111525984.1 | 2-hydroxyacyl-CoA dehydratase family protein | - |
| FX093_RS05095 () | 1120598..1121401 | - | 804 | WP_111525983.1 | hypothetical protein | - |
| FX093_RS05100 () | 1121588..1122427 | + | 840 | WP_111525982.1 | 4Fe-4S binding protein | - |
| FX093_RS05105 () | 1122517..1123215 | + | 699 | WP_111525981.1 | hypothetical protein | - |
| FX093_RS05110 () | 1123335..1124819 | - | 1485 | WP_111525980.1 | aldehyde dehydrogenase family protein | - |
| FX093_RS05115 () | 1125202..1126305 | + | 1104 | WP_111525991.1 | peptidase | - |
| FX093_RS05120 () | 1126339..1127100 | - | 762 | WP_111525979.1 | CPBP family intramembrane metalloprotease | - |
| FX093_RS05125 () | 1127272..1128057 | + | 786 | WP_111525978.1 | YhfC family intramembrane metalloprotease | - |
| FX093_RS05130 () | 1128312..1129412 | + | 1101 | WP_111525977.1 | RtcB family protein | - |
| FX093_RS05135 () | 1129409..1130008 | + | 600 | WP_111525976.1 | peptide chain release factor H | - |
| FX093_RS05140 () | 1130029..1130760 | + | 732 | WP_111525975.1 | hypothetical protein | - |
| FX093_RS05145 () | 1130905..1133292 | + | 2388 | WP_119808329.1 | HAD-IC family P-type ATPase | - |
| FX093_RS05150 () | 1133647..1134159 | - | 513 | Protein_1008 | ISNCY family transposase ISCb1 | Transposase |
| FX093_RS05155 () | 1134351..1135739 | + | 1389 | WP_119808255.1 | ISNCY family transposase ISSeq2 | Transposase |
| FX093_RS05160 () | 1135893..1136096 | + | 204 | WP_111526127.1 | hypothetical protein | - |
| FX093_RS13090 () | 1136120..1136290 | + | 171 | WP_162902551.1 | hypothetical protein | - |
| FX093_RS05165 () | 1136272..1136787 | + | 516 | WP_111526126.1 | nitroreductase family protein | - |
| FX093_RS05170 () | 1136811..1137140 | + | 330 | WP_111526125.1 | hypothetical protein | - |
| FX093_RS05175 () | 1137137..1137817 | + | 681 | WP_111526124.1 | DUF1287 domain-containing protein | - |
| FX093_RS05180 () | 1137907..1139410 | + | 1504 | Protein_1015 | HAD-IC family P-type ATPase | - |
| FX093_RS05185 () | 1139534..1139887 | - | 354 | WP_007593636.1 | cupin domain-containing protein | - |
| FX093_RS05190 () | 1139924..1141323 | - | 1400 | Protein_1017 | Peptide methionine sulfoxide reductase MsrA | VF |
| FX093_RS05195 () | 1141386..1142165 | - | 780 | WP_081443208.1 | alpha/beta hydrolase | - |
| FX093_RS05200 () | 1142238..1143698 | - | 1461 | WP_111526078.1 | MobA/MobL family protein | - |
| FX093_RS05205 () | 1143940..1144260 | - | 321 | WP_009216383.1 | DUF3847 domain-containing protein | - |
| FX093_RS05210 () | 1144333..1144449 | - | 117 | WP_101603692.1 | transposon-encoded TnpW family protein | - |
| FX093_RS05215 () | 1144611..1146449 | - | 1839 | WP_111526077.1 | hypothetical protein ; Integrase | Integrase |
| FX093_RS05220 () | 1146504..1147430 | + | 927 | Protein_1023 | Calcium-transporting ATPase CtpE | VF |
| FX093_RS05225 () | 1147536..1148579 | + | 1044 | WP_111524070.1 | Fic family protein | - |
| FX093_RS05230 () | 1148901..1149221 | + | 321 | WP_111524071.1 | hypothetical protein | - |
| FX093_RS05235 () | 1149329..1149505 | + | 177 | WP_005539624.1 | 30S ribosomal protein S21 | - |
| FX093_RS05240 () | 1149577..1150569 | + | 993 | WP_111524072.1 | PhoH family protein | - |
| FX093_RS05245 () | 1150609..1151103 | + | 495 | WP_111524073.1 | rRNA maturation RNase YbeY | - |
| FX093_RS05250 () | 1151103..1152758 | + | 1656 | WP_111524074.1 | polysaccharide biosynthesis protein | - |
| FX093_RS05255 () | 1152755..1153969 | + | 1215 | WP_111524075.1 | aminoacetone oxidase family FAD-binding enzyme | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|