MGE detailed information
MGE type: IS/Tn MGE length: 2916 bp
Accession: NZ_LR594677 Location: 87139..90054 Organism: Variovorax sp. PBS-H4 Replicon: plasmid 3
Accession: NZ_LR594677 Location: 87139..90054 Organism: Variovorax sp. PBS-H4 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5CHR_RS31465 () | 82475..83080 | + | 606 | WP_068683794.1 | autoinducer synthase | - |
| E5CHR_RS31470 () | 83077..83943 | + | 867 | WP_068683792.1 | phytanoyl-CoA dioxygenase family protein | - |
| E5CHR_RS31475 () | 84190..84699 | + | 510 | WP_068683790.1 | DUF2285 domain-containing protein | - |
| E5CHR_RS31480 () | 84708..84941 | - | 234 | WP_068683789.1 | helix-turn-helix transcriptional regulator | - |
| E5CHR_RS31485 () | 85016..85294 | + | 279 | WP_068683784.1 | hypothetical protein | - |
| E5CHR_RS31490 () | 85481..85711 | + | 231 | WP_083944709.1 | helix-turn-helix domain-containing protein | - |
| E5CHR_RS31495 () | 85641..86279 | + | 639 | WP_083944708.1 | S26 family signal peptidase | - |
| E5CHR_RS31500 () | 86267..86893 | + | 627 | WP_068683781.1 | lytic transglycosylase domain-containing protein | - |
| E5CHR_RS31505 () | 87139..90054 | - | 2916 | WP_003158660.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| E5CHR_RS31510 () | 90771..91052 | - | 282 | WP_011114071.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| E5CHR_RS31515 () | 91039..91302 | - | 264 | WP_011114070.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| E5CHR_RS31520 () | 91475..91903 | + | 429 | WP_011114069.1 | antirestriction protein | - |
| E5CHR_RS31525 () | 91903..92166 | + | 264 | WP_011296181.1 | hypothetical protein | - |
| E5CHR_RS31530 () | 92178..93386 | + | 1209 | WP_011114068.1 | hypothetical protein | - |
| E5CHR_RS31535 () | 93403..93660 | + | 258 | WP_011114067.1 | hypothetical protein | - |
| E5CHR_RS31540 () | 93818..94054 | + | 237 | WP_011114066.1 | stable inheritance protein KleA | - |
| E5CHR_RS31545 () | 94263..94589 | + | 327 | WP_011114065.1 | hypothetical protein | - |
| E5CHR_RS31550 () | 94591..94920 | + | 330 | WP_011114064.1 | DUF2761 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|