MGE detailed information
MGE type: Conjugative plasmid MGE length: 71057 bp
Accession: NZ_LR594670 Location: 1..71057 Organism: Variovorax sp. SRS16 Replicon: plasmid 5
Accession: NZ_LR594670 Location: 1..71057 Organism: Variovorax sp. SRS16 Replicon: plasmid 5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5P2_RS37285 () | 1..774 | + | 774 | WP_162572150.1 | Chromosome partitioning protein ParA | VF |
| E5P2_RS37290 () | 771..1844 | + | 1074 | WP_011171679.1 | ParB/RepB/Spo0J family partition protein | - |
| E5P2_RS37295 () | 2039..3055 | + | 1017 | WP_011171678.1 | DNA-binding protein | - |
| E5P2_RS37300 () | 3120..3308 | + | 189 | WP_011171677.1 | antitoxin VbhA family protein | Antitoxin Detail |
| E5P2_RS37305 () | 3305..3913 | + | 609 | WP_011171676.1 | Fic/DOC family protein | Toxin Detail |
| E5P2_RS37310 () | 3930..4274 | + | 345 | WP_015063536.1 | hypothetical protein | - |
| E5P2_RS37315 () | 4326..4955 | + | 630 | WP_162572165.1 | hypothetical protein | - |
| E5P2_RS37320 () | 5026..5463 | - | 438 | WP_011171734.1 | conjugal transfer protein TraM | - |
| E5P2_RS37325 () | 5463..6188 | - | 726 | WP_011171733.1 | conjugal transfer protein TraL | - |
| E5P2_RS37330 () | 6188..6586 | - | 399 | WP_011171732.1 | TraK family protein | - |
| E5P2_RS37335 () | 7011..7367 | + | 357 | WP_162572166.1 | conjugal transfer transcriptional regulator TraJ | - |
| E5P2_RS37340 () | 7402..9594 | + | 2193 | WP_015063533.1 | Protein TraI | Relaxase |
| E5P2_RS37345 () | 9591..11504 | + | 1914 | WP_015063532.1 | Conjugal transfer protein TraG | VF |
| E5P2_RS37350 () | 11501..12037 | + | 537 | WP_011171726.1 | conjugative transfer signal peptidase TraF | - |
| E5P2_RS37355 () | 12046..14238 | + | 2193 | WP_011171725.1 | DNA topoisomerase 3 | - |
| E5P2_RS37360 () | 14243..14620 | + | 378 | WP_011171724.1 | hypothetical protein | - |
| E5P2_RS37365 () | 14624..18802 | + | 4179 | WP_162572151.1 | DUF1738 domain-containing protein | - |
| E5P2_RS37370 () | 19141..19815 | + | 675 | WP_162572167.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E5P2_RS37375 () | 20007..22100 | + | 2094 | WP_162572168.1 | AAA family ATPase | - |
| E5P2_RS37380 () | 22212..22316 | - | 105 | WP_197894043.1 | antitoxin VbhA family protein | - |
| E5P2_RS37385 () | 22319..22621 | + | 303 | WP_197894044.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| E5P2_RS37390 () | 22578..22985 | - | 408 | WP_031944013.1 | hypothetical protein | - |
| E5P2_RS37395 () | 22982..23467 | - | 486 | WP_015063510.1 | thermonuclease family protein | - |
| E5P2_RS37400 () | 23469..23894 | - | 426 | WP_053057113.1 | Type IV secretion system putative outer membrane lipoprotein/BS1330_II0058 | VF |
| E5P2_RS37405 () | 23908..24708 | - | 801 | WP_162572152.1 | conjugal transfer protein TraX | - |
| E5P2_RS37410 () | 24609..24872 | - | 264 | WP_162572153.1 | conjugal transfer protein TrbO | - |
| E5P2_RS37415 () | 24898..25503 | - | 606 | WP_162572154.1 | hypothetical protein | VF |
| E5P2_RS37420 () | 25517..26110 | - | 594 | WP_015063527.1 | TrbM Mating pair formation protein | - |
| E5P2_RS37425 () | 26130..27863 | - | 1734 | WP_174259956.1 | P-type conjugative transfer protein TrbL | - |
| E5P2_RS37430 () | 27874..28113 | - | 240 | WP_031944010.1 | entry exclusion lipoprotein TrbK | - |
| E5P2_RS37435 () | 28124..28897 | - | 774 | WP_031944011.1 | P-type conjugative transfer protein TrbJ | - |
| E5P2_RS37440 () | 28916..30310 | - | 1395 | WP_015063524.1 | TrbI/VirB10 family protein | - |
| E5P2_RS37445 () | 30316..30783 | - | 468 | WP_015063523.1 | TrbH Mating pair formation protein | - |
| E5P2_RS37450 () | 30786..31691 | - | 906 | WP_015063522.1 | P-type conjugative transfer protein TrbG | - |
| E5P2_RS37455 () | 31704..32480 | - | 777 | WP_015063521.1 | conjugal transfer protein TrbF | - |
| E5P2_RS37460 () | 32477..35014 | - | 2538 | WP_015063520.1 | VirB4 family type IV secretion/conjugal transfer ATPase | - |
| E5P2_RS37465 () | 35011..35322 | - | 312 | WP_011171720.1 | conjugal transfer protein TrbD | - |
| E5P2_RS37470 () | 35325..35753 | - | 429 | WP_011171719.1 | IncP-type conjugal transfer pilin TrbC | - |
| E5P2_RS37475 () | 35765..36727 | - | 963 | WP_011171718.1 | Type IV secretion system protein PtlH | VF |
| E5P2_RS37480 () | 36980..37357 | - | 378 | WP_011171717.1 | transcriptional regulator | - |
| E5P2_RS37485 () | 37678..38547 | + | 870 | WP_015063508.1 | replication initiator protein A | - |
| E5P2_RS37490 () | 38916..40022 | + | 1107 | WP_162572156.1 | hypothetical protein | - |
| E5P2_RS37495 () | 40122..41150 | + | 1029 | WP_162572157.1 | DNA adenine methylase | - |
| E5P2_RS37500 () | 41298..44212 | + | 2915 | Protein_43 | Tn3 family transposase TnpA_IS1071 | Transposase |
| E5P2_RS37505 () | 44363..45456 | + | 1094 | Protein_44 | IS91 family transposase ISAzo26 | Transposase |
| E5P2_RS37510 () | 46308..47735 | - | 1428 | WP_162572158.1 | amidase | - |
| E5P2_RS37515 () | 47822..48760 | - | 939 | WP_162572159.1 | hypothetical protein | VF |
| E5P2_RS37520 () | 49621..50706 | - | 1086 | Protein_47 | IS91 family transposase ISAzo26 | Transposase |
| E5P2_RS37525 () | 50857..53772 | - | 2916 | WP_003158660.1 | Tn3 family transposase TnpA_IS1071 | Transposase |
| E5P2_RS37530 () | 53918..54436 | + | 519 | Protein_49 | IS21 family transposase ISCARN16 | Transposase |
| E5P2_RS37535 () | 54612..54914 | - | 303 | WP_162572160.1 | phage integrase N-terminal SAM-like domain-containing protein | - |
| E5P2_RS37540 () | 55132..55464 | + | 333 | WP_162572169.1 | quaternary ammonium compound efflux SMR transporter QacG2 | - |
| E5P2_RS37545 () | 55774..56334 | + | 561 | WP_108499742.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| E5P2_RS37550 () | 56337..59306 | + | 2970 | Protein_53 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| E5P2_RS37555 () | 59631..59795 | + | 165 | WP_162572161.1 | hypothetical protein | - |
| E5P2_RS37560 () | 59910..61916 | + | 2007 | Protein_55 | Tn3 family transposase TnpA_IS1071 | Transposase |
| E5P2_RS37565 () | 62156..63682 | + | 1527 | WP_162572162.1 | IS21 family transposase ISCARN95 | Transposase |
| E5P2_RS37570 () | 63721..64485 | + | 765 | WP_162572170.1 | IS21 family transposase ISCARN95 | Transposase |
| E5P2_RS37575 () | 64579..65493 | + | 915 | Protein_58 | Tn3 family transposase TnpA_IS1071 | Transposase |
| E5P2_RS37580 () | 66639..66923 | + | 285 | WP_015063519.1 | hypothetical protein | - |
| E5P2_RS37585 () | 67020..67454 | + | 435 | WP_011171688.1 | antirestriction protein | - |
| E5P2_RS37590 () | 67766..68908 | + | 1143 | WP_162572171.1 | klcB | - |
| E5P2_RS37595 () | 68923..69180 | + | 258 | WP_011171686.1 | transcriptional repressor protein KorC | - |
| E5P2_RS37600 () | 69371..69628 | + | 258 | WP_011171685.1 | stable inheritance protein KleA | - |
| E5P2_RS37605 () | 69745..70068 | + | 324 | WP_075122821.1 | protein kleE | - |
| E5P2_RS37610 () | 70070..70591 | + | 522 | WP_162572163.1 | DUF2761 domain-containing protein | - |
| E5P2_RS37615 () | 70753..71057 | + | 305 | WP_162572164.1 | transcriptional regulator KorA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|