MGE detailed information
MGE type: Prophage MGE length: 68580 bp
Accession: NZ_LR536430 Location: 3574627..3643206 Organism: Escherichia coli isolate f974b26a-5e81-11e8-bf7f-3c4a9275d6c8 Replicon: chromosome
Accession: NZ_LR536430 Location: 3574627..3643206 Organism: Escherichia coli isolate f974b26a-5e81-11e8-bf7f-3c4a9275d6c8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4Z69_RS17675 () | 3570271..3570672 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| E4Z69_RS17680 () | 3570711..3571766 | - | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| E4Z69_RS17685 () | 3572054..3573157 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| E4Z69_RS17690 () | 3573169..3574422 | + | 1254 | WP_000893260.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E4Z69_RS17700 () | 3574627..3575790 | - | 1164 | WP_016243462.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E4Z69_RS17710 () | 3576017..3576322 | - | 306 | WP_000206736.1 | hypothetical protein | - |
| E4Z69_RS17715 () | 3576322..3576684 | - | 363 | WP_001242705.1 | phage protein | - |
| E4Z69_RS17720 () | 3576675..3577211 | - | 537 | WP_000008356.1 | HD family hydrolase | - |
| E4Z69_RS17725 () | 3577634..3578230 | - | 597 | WP_001764244.1 | hypothetical protein | - |
| E4Z69_RS17730 () | 3578720..3579394 | - | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| E4Z69_RS17735 () | 3579485..3579685 | + | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| E4Z69_RS17740 () | 3579729..3580286 | + | 558 | WP_000515829.1 | protein YmfL | - |
| E4Z69_RS17745 () | 3580462..3580641 | + | 180 | WP_071595713.1 | DUF4222 domain-containing protein | - |
| E4Z69_RS17750 () | 3580631..3581572 | + | 942 | WP_000104967.1 | helix-turn-helix domain-containing protein | - |
| E4Z69_RS17755 () | 3581569..3582063 | + | 495 | WP_072278691.1 | PerC family transcriptional regulator | - |
| E4Z69_RS17760 () | 3582063..3582716 | + | 654 | WP_001764248.1 | phage N-6-adenine-methyltransferase | - |
| E4Z69_RS17765 () | 3582713..3583039 | + | 327 | WP_000210164.1 | LexA family transcriptional regulator | - |
| E4Z69_RS17770 () | 3583036..3583425 | + | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E4Z69_RS17775 () | 3583445..3584242 | + | 798 | WP_001061403.1 | KilA-N domain-containing protein | - |
| E4Z69_RS17780 () | 3584250..3585239 | + | 990 | WP_001764249.1 | DUF968 domain-containing protein | - |
| E4Z69_RS17785 () | 3585253..3586005 | + | 753 | WP_001047109.1 | antitermination protein | - |
| E4Z69_RS17790 () | 3586191..3586526 | + | 336 | WP_000606308.1 | hypothetical protein | - |
| E4Z69_RS17795 () | 3586678..3586983 | + | 306 | WP_000544527.1 | phage holin family protein | - |
| E4Z69_RS17800 () | 3586970..3587446 | + | 477 | WP_001764250.1 | glycoside hydrolase family protein | - |
| E4Z69_RS17805 () | 3587430..3587891 | + | 462 | WP_001701537.1 | lysis protein | - |
| E4Z69_RS17810 () | 3588159..3588383 | + | 225 | WP_000892817.1 | hypothetical protein | - |
| E4Z69_RS17815 () | 3588550..3588900 | + | 351 | WP_001764251.1 | HNH endonuclease | - |
| E4Z69_RS17820 () | 3589026..3589520 | + | 495 | WP_000929173.1 | phage terminase small subunit P27 family | - |
| E4Z69_RS17825 () | 3589754..3591250 | + | 1497 | WP_123001298.1 | terminase large subunit | - |
| E4Z69_RS17830 () | 3591262..3591444 | + | 183 | WP_000605606.1 | hypothetical protein | - |
| E4Z69_RS17835 () | 3591444..3592685 | + | 1242 | WP_016243466.1 | phage portal protein | - |
| E4Z69_RS17840 () | 3592663..3593313 | + | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| E4Z69_RS17845 () | 3593328..3594533 | + | 1206 | WP_016243468.1 | phage major capsid protein | - |
| E4Z69_RS17850 () | 3594583..3594810 | + | 228 | WP_016243469.1 | hypothetical protein | - |
| E4Z69_RS17855 () | 3594785..3595108 | + | 324 | WP_016243470.1 | head-tail connector protein | - |
| E4Z69_RS17860 () | 3595105..3595515 | + | 411 | WP_016243471.1 | phage head closure protein | - |
| E4Z69_RS17865 () | 3595490..3595996 | + | 507 | WP_016243472.1 | hypothetical protein | - |
| E4Z69_RS17870 () | 3595993..3596553 | + | 561 | WP_016243473.1 | hypothetical protein | - |
| E4Z69_RS17875 () | 3596562..3596732 | + | 171 | WP_016243474.1 | DUF2635 domain-containing protein | - |
| E4Z69_RS17880 () | 3596716..3598212 | + | 1497 | WP_001759749.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| E4Z69_RS17885 () | 3598212..3598568 | + | 357 | WP_000090998.1 | phage tail tube protein | - |
| E4Z69_RS17890 () | 3598568..3598837 | + | 270 | WP_000661051.1 | phage tail assembly protein | - |
| E4Z69_RS17900 () | 3598979..3600811 | + | 1833 | WP_016243475.1 | phage tail tape measure protein | - |
| E4Z69_RS17905 () | 3600903..3601433 | + | 531 | WP_000679479.1 | hypothetical protein | - |
| E4Z69_RS17910 () | 3601495..3602823 | + | 1329 | WP_016243476.1 | DNA circularization N-terminal domain-containing protein | - |
| E4Z69_RS17915 () | 3602820..3603899 | + | 1080 | WP_016243477.1 | phage tail protein | - |
| E4Z69_RS17920 () | 3603899..3604447 | + | 549 | WP_001542670.1 | phage baseplate assembly protein V | - |
| E4Z69_RS17925 () | 3604447..3604872 | + | 426 | WP_042027905.1 | phage GP46 family protein | - |
| E4Z69_RS17930 () | 3604859..3605917 | + | 1059 | WP_016243479.1 | baseplate J/gp47 family protein | - |
| E4Z69_RS17935 () | 3605908..3606492 | + | 585 | WP_016243480.1 | YmfQ family protein | - |
| E4Z69_RS17940 () | 3606496..3607317 | + | 822 | WP_000554686.1 | hypothetical protein | - |
| E4Z69_RS17945 () | 3607317..3607910 | + | 594 | WP_000613358.1 | tail fiber assembly protein | - |
| E4Z69_RS17950 () | 3607882..3608325 | - | 444 | WP_000978831.1 | tail fiber assembly protein | - |
| E4Z69_RS17955 () | 3608325..3608696 | - | 372 | WP_001115561.1 | hypothetical protein | - |
| E4Z69_RS17960 () | 3608726..3609280 | + | 555 | WP_000905043.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| E4Z69_RS17965 () | 3609341..3610114 | - | 774 | WP_000355484.1 | hypothetical protein | - |
| E4Z69_RS17980 () | 3610642..3611762 | + | 1121 | WP_087451024.1 | IS3 family transposase ISSen4 | Transposase |
| E4Z69_RS17985 () | 3611844..3612263 | + | 420 | WP_001333214.1 | hypothetical protein | - |
| E4Z69_RS17990 () | 3612579..3614045 | + | 1467 | WP_000723924.1 | hypothetical protein | - |
| E4Z69_RS17995 () | 3614866..3615207 | - | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| E4Z69_RS18000 () | 3615228..3615545 | - | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| E4Z69_RS18005 () | 3615564..3615785 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| E4Z69_RS18010 () | 3615794..3616270 | - | 477 | WP_001549015.1 | RadC family protein | - |
| E4Z69_RS18015 () | 3616286..3616744 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| E4Z69_RS18020 () | 3616842..3617081 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| E4Z69_RS18025 () | 3617158..3617625 | - | 468 | WP_001385283.1 | hypothetical protein | - |
| E4Z69_RS18030 () | 3617648..3618091 | - | 444 | WP_000649865.1 | hypothetical protein | - |
| E4Z69_RS18035 () | 3618091..3618327 | - | 237 | WP_001144031.1 | hypothetical protein | - |
| E4Z69_RS18040 () | 3618368..3619069 | - | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| E4Z69_RS18045 () | 3619286..3620107 | - | 822 | WP_000197388.1 | DUF945 domain-containing protein | - |
| E4Z69_RS18050 () | 3620199..3621062 | - | 864 | WP_001065555.1 | GTPase family protein | - |
| E4Z69_RS18055 () | 3621494..3622188 | + | 695 | Protein_3475 | IS5 family transposase ISPa16 | Transposase |
| E4Z69_RS18060 () | 3622184..3622753 | + | 570 | Protein_3476 | IS5 family transposase ISPa16 | Transposase |
| E4Z69_RS18065 () | 3622978..3624129 | - | 1152 | WP_000323729.1 | hypothetical protein | VF |
| E4Z69_RS18070 () | 3624154..3625119 | - | 966 | WP_000196689.1 | M48 family metalloprotease | - |
| E4Z69_RS18075 () | 3625097..3625594 | - | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| E4Z69_RS18080 () | 3625591..3627306 | - | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| E4Z69_RS18085 () | 3627310..3627750 | - | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| E4Z69_RS18090 () | 3627740..3628885 | - | 1146 | WP_001166995.1 | hypothetical protein | - |
| E4Z69_RS18095 () | 3628965..3629576 | - | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| E4Z69_RS18100 () | 3629666..3630553 | - | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| E4Z69_RS18105 () | 3630656..3631570 | - | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| E4Z69_RS18110 () | 3631593..3632051 | - | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| E4Z69_RS18115 () | 3632139..3633866 | - | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| E4Z69_RS18120 () | 3633927..3634118 | - | 192 | WP_001295707.1 | hypothetical protein | - |
| E4Z69_RS18125 () | 3634118..3637000 | - | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| E4Z69_RS18130 () | 3637106..3637675 | - | 570 | WP_000350435.1 | hypothetical protein | VF |
| E4Z69_RS18135 () | 3637710..3637991 | - | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| E4Z69_RS18140 () | 3638219..3638482 | - | 264 | WP_001549018.1 | hypothetical protein | - |
| E4Z69_RS18145 () | 3638497..3638760 | + | 264 | WP_001247776.1 | transposase | - |
| E4Z69_RS18150 () | 3638705..3638869 | + | 165 | Protein_3494 | transposase domain-containing protein | - |
| E4Z69_RS18160 () | 3639087..3640385 | + | 1299 | WP_000342159.1 | IS256 family transposase ISSoEn2 | Transposase |
| E4Z69_RS18165 () | 3640283..3640771 | - | 489 | Protein_3496 | IS3 family transposase | - |
| E4Z69_RS18170 () | 3640852..3642360 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| E4Z69_RS18180 () | 3643033..3643458 | - | 426 | Protein_3498 | IS3 family transposase | - |
| E4Z69_RS18185 () | 3643461..3644843 | + | 1383 | Protein_3499 | bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | - |
| E4Z69_RS18190 () | 3644845..3645798 | + | 954 | WP_000543445.1 | 3-carboxyethylcatechol 2,3-dioxygenase | - |
| E4Z69_RS18195 () | 3645827..3646693 | + | 867 | WP_000222149.1 | alpha/beta fold hydrolase | - |
| E4Z69_RS18200 () | 3646703..3647512 | + | 810 | WP_000184938.1 | 2-keto-4-pentenoate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|