MGE detailed information
MGE type: Genomic_island MGE length: 40321 bp
Accession: NZ_LR216065 Location: 937521..977841 Organism: Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6 Replicon: chromosome
Accession: NZ_LR216065 Location: 937521..977841 Organism: Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0F40_RS05030 () | 932806..933420 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
| E0F40_RS05035 () | 933494..934468 | + | 975 | WP_001227738.1 | DUF1002 domain-containing protein | - |
| E0F40_RS05040 () | 934542..936173 | + | 1632 | WP_000914579.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| E0F40_RS05045 () | 936387..936620 | + | 234 | WP_000710799.1 | hypothetical protein | - |
| E0F40_RS05050 () | 936911..937128 | + | 218 | Protein_938 | helix-turn-helix transcriptional regulator | - |
| E0F40_RS05060 () | 937521..938546 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| E0F40_RS05065 () | 938536..939543 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| E0F40_RS05070 () | 939543..940550 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| E0F40_RS05075 () | 940550..941344 | + | 795 | WP_000677525.1 | Petrobactin import ATP-binding protein FpuD | VF |
| E0F40_RS05080 () | 941732..942157 | + | 426 | WP_075270856.1 | restriction endonuclease subunit S | - |
| E0F40_RS05085 () | 942213..942530 | + | 318 | WP_000968321.1 | DUF3847 domain-containing protein | - |
| E0F40_RS05090 () | 942844..944483 | + | 1640 | Protein_945 | MobA/MobL family protein | - |
| E0F40_RS11720 () | 944557..944730 | + | 174 | WP_001042635.1 | hypothetical protein | - |
| E0F40_RS05095 () | 944916..945367 | + | 452 | Protein_947 | PcfB family protein | - |
| E0F40_RS05100 () | 945494..946222 | + | 729 | WP_000224685.1 | phage replisome organizer N-terminal domain-containing protein | - |
| E0F40_RS11725 () | 946906..947067 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| E0F40_RS05110 () | 947159..948838 | + | 1680 | WP_000031825.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| E0F40_RS05115 () | 949106..949672 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| E0F40_RS05120 () | 949994..950182 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| E0F40_RS05125 () | 950244..951002 | + | 759 | WP_000262004.1 | ATP-grasp domain-containing protein | - |
| E0F40_RS05130 () | 951060..951914 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| E0F40_RS05135 () | 952026..952910 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| E0F40_RS05140 () | 953073..954812 | + | 1740 | Protein_956 | alpha-glycosidase | - |
| E0F40_RS05145 () | 955087..955542 | + | 456 | WP_000500474.1 | hypothetical protein | - |
| E0F40_RS05150 () | 955987..956463 | + | 477 | WP_000579613.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| E0F40_RS05155 () | 956463..957224 | + | 762 | WP_000405362.1 | toxin PezT | Toxin Detail |
| E0F40_RS05160 () | 957252..958028 | + | 777 | Protein_960 | hypothetical protein | - |
| E0F40_RS05165 () | 957956..958408 | + | 453 | WP_001835033.1 | hypothetical protein | - |
| E0F40_RS05170 () | 959227..959586 | + | 360 | WP_000003745.1 | hypothetical protein | - |
| E0F40_RS05175 () | 959596..959961 | + | 366 | WP_000263048.1 | MobC family plasmid mobilization relaxosome protein | - |
| E0F40_RS05180 () | 959948..961798 | + | 1851 | WP_000261804.1 | relaxase/mobilization nuclease domain-containing protein | - |
| E0F40_RS05185 () | 962054..963486 | + | 1433 | Protein_965 | IS1182 family transposase | - |
| E0F40_RS05190 () | 963724..963858 | - | 135 | Protein_966 | transposase family protein | - |
| E0F40_RS11875 () | 964486..964889 | + | 404 | Protein_967 | hypothetical protein | - |
| E0F40_RS05200 () | 964948..965622 | + | 675 | WP_000903082.1 | chloramphenicol acetyltransferase | - |
| E0F40_RS05205 () | 965690..967327 | + | 1638 | WP_000021543.1 | methionine--tRNA ligase | - |
| E0F40_RS05210 () | 967428..968195 | + | 768 | WP_001061789.1 | tyrosine-protein phosphatase | - |
| E0F40_RS05215 () | 969212..970204 | + | 993 | Protein_971 | Linearmycin resistance ATP-binding protein LnrL | VF |
| E0F40_RS05220 () | 970206..971023 | + | 818 | Protein_972 | ABC-2 family transporter protein | - |
| E0F40_RS05225 () | 971025..971810 | + | 786 | WP_000760754.1 | ABC transporter permease | - |
| E0F40_RS05230 () | 972189..973384 | - | 1196 | Protein_974 | IS110 family transposase | - |
| E0F40_RS05235 () | 973886..974089 | + | 204 | WP_000275922.1 | helix-turn-helix transcriptional regulator | - |
| E0F40_RS11730 () | 974220..974372 | + | 153 | WP_001812617.1 | hypothetical protein | - |
| E0F40_RS05240 () | 974539..976332 | + | 1794 | WP_000740021.1 | hypothetical protein ; Integrase | Integrase |
| E0F40_RS05245 () | 976437..977024 | + | 588 | WP_000509391.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| E0F40_RS05250 () | 977264..977542 | + | 279 | WP_000416471.1 | aminoglycoside phosphotransferase | - |
| E0F40_RS05255 () | 977647..977976 | + | 330 | Protein_980 | IS5 family transposase IS1381A | Transposase |
| E0F40_RS05260 () | 978104..979333 | + | 1230 | WP_000703358.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| E0F40_RS05265 () | 979353..982049 | + | 2697 | WP_000058201.1 | phosphoenolpyruvate carboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|