NZ_LR2134601..91948

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 91948 bp
Accession: NZ_LR213460        Location: 1..91948         Organism: Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333       Replicon: plasmid 3


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E0E38_RS24640 46..1077 + 1032 WP_000907880.1 plasmid replication initiator RepA -
E0E38_RS24655 1985..2269 + 285 WP_001178089.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
E0E38_RS24660 2269..2544 + 276 WP_000421257.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
E0E38_RS24665 2650..2931 + 282 WP_001105066.1 hypothetical protein -
E0E38_RS24675 3122..3388 - 267 WP_000627831.1 hypothetical protein -
E0E38_RS24685 3626..4228 - 603 WP_000517694.1 ProQ/FINO family protein -
E0E38_RS24695 4582..5928 + 1347 WP_130872907.1 protein YagA -
E0E38_RS26195 6471..6773 - 303 WP_001245884.1 hypothetical protein -
E0E38_RS24710 6770..7396 - 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
E0E38_RS24715 7608..8879 - 1272 WP_000457510.1 Y-family DNA polymerase -
E0E38_RS24720 8879..9316 - 438 WP_000109071.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
E0E38_RS24725 9313..9561 - 249 WP_000618110.1 DinI-like family protein -
E0E38_RS24740 9980..10882 + 903 WP_001330417.1 DUF1281 domain-containing protein -
E0E38_RS24745 10879..11190 + 312 WP_031935767.1 hypothetical protein -
E0E38_RS24750 11266..11949 + 684 WP_000086137.1 DNA methylase -
E0E38_RS24755 11950..12171 + 222 WP_001104873.1 hypothetical protein -
E0E38_RS24760 12101..12619 + 519 WP_223168556.1 DUF1380 family protein -
E0E38_RS24765 12664..13434 + 771 WP_001006204.1 hypothetical protein -
E0E38_RS24780 13850..14275 + 426 WP_001198900.1 antirestriction protein -
E0E38_RS24785 14322..14744 + 423 WP_000271688.1 DUF1380 family protein -
E0E38_RS24790 14741..14932 + 192 WP_001027516.1 hypothetical protein -
E0E38_RS24800 15070..15351 + 282 WP_154671919.1 hypothetical protein -
E0E38_RS24810 15704..16231 + 528 WP_001276120.1 single-stranded DNA-binding protein -
E0E38_RS24815 16289..16522 + 234 WP_000006020.1 DUF905 domain-containing protein -
E0E38_RS24820 16581..18539 + 1959 WP_001145476.1 ParB/RepB/Spo0J family partition protein -
E0E38_RS24825 18594..19028 + 435 WP_000845903.1 conjugation system SOS inhibitor PsiB -
E0E38_RS24830 19025..19744 + 720 WP_001276270.1 plasmid SOS inhibition protein A -
E0E38_RS24835 19741..20337 + 597 WP_000977995.1 hypothetical protein -
E0E38_RS24845 20799..21299 + 501 WP_000117631.1 antirestriction protein ArdA -
E0E38_RS24860 22032..22466 + 435 WP_000218862.1 hypothetical protein -
E0E38_RS24865 22559..22825 + 267 WP_001247860.1 hypothetical protein -
E0E38_RS24870 23002..23391 + 390 WP_000833767.1 hypothetical protein -
E0E38_RS24875 23388..24302 + 915 WP_000038329.1 Recombination-promoting nuclease RpnA VF
E0E38_RS24880 24302..24547 + 246 WP_001260884.1 hypothetical protein -
E0E38_RS24885 24578..24829 - 252 WP_000148291.1 helix-turn-helix transcriptional regulator -
E0E38_RS24895 25410..26258 + 849 WP_001077033.1 DUF4942 domain-containing protein -
E0E38_RS24900 26344..26679 - 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
E0E38_RS24905 26912..27244 + 333 WP_001291058.1 plasmid mobilization protein MobA -
E0E38_RS24910 27256..29967 + 2712 WP_000991387.1 Protein TraI Relaxase
E0E38_RS24915 30035..30466 + 432 WP_001335086.1 cell envelope integrity TolA C-terminal domain-containing protein -
E0E38_RS24920 30816..31220 + 405 Protein_40 IS91 family transposase ISPps1 Transposase
E0E38_RS24925 31327..32058 - 732 Protein_41 hypothetical protein ARG
E0E38_RS24930 32093..35098 - 3006 WP_001143772.1 Tn3 family transposase TnpA_Tn3 Transposase
E0E38_RS24935 35262..35819 + 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
E0E38_RS24940 36002..36862 + 861 WP_000027057.1 Beta-lactamase TEM ARG
E0E38_RS24945 37011..37118 - 108 Protein_45 aminoglycoside phosphotransferase family protein -
E0E38_RS24950 37118..37921 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
E0E38_RS24955 37982..38797 - 816 WP_001043260.1 Dihydropteroate synthase ARG
E0E38_RS24975 39661..41964 - 2304 WP_000077663.1 F-type conjugative transfer protein TrbC -
E0E38_RS24980 41945..43069 - 1125 WP_000152378.1 DsbC family protein -
E0E38_RS24985 43066..44373 - 1308 WP_000121918.1 IncI1-type conjugal transfer protein TrbA -
E0E38_RS26205 44711..44857 + 147 WP_001346191.1 hypothetical protein -
E0E38_RS26805 44910..45005 + 96 WP_001388983.1 DinQ-like type I toxin DqlB -
E0E38_RS26810 45594..45689 + 96 WP_001388983.1 DinQ-like type I toxin DqlB -
E0E38_RS26210 45752..45928 - 177 WP_001054907.1 hypothetical protein -
E0E38_RS25000 46078..46545 - 468 WP_000598962.1 thermonuclease family protein -
E0E38_RS25005 46705..47328 + 624 WP_001155250.1 helix-turn-helix domain-containing protein -
E0E38_RS25015 47526..47741 - 216 WP_000266543.1 hypothetical protein -
E0E38_RS25020 47745..48113 - 369 WP_001345852.1 hypothetical protein -
E0E38_RS25025 48125..48316 - 192 WP_000751583.1 hypothetical protein -
E0E38_RS25030 48404..48646 - 243 WP_000650923.1 hypothetical protein -
E0E38_RS25035 48976..49128 + 153 WP_001335079.1 Hok/Gef family protein -
E0E38_RS26675 49266..49778 - 513 WP_001401993.1 TnsA endonuclease N-terminal domain-containing protein -
E0E38_RS26680 49957..50856 - 900 WP_001401994.1 sigma factor-like helix-turn-helix DNA-binding protein -
E0E38_RS25045 51130..51780 - 651 WP_001044247.1 plasmid IncI1-type surface exclusion protein ExcA -
E0E38_RS25050 51869..54034 - 2166 WP_000691810.1 DotA/TraY family protein -
E0E38_RS25055 54109..54678 - 570 WP_000650752.1 conjugal transfer protein TraX -
E0E38_RS25060 54675..55880 - 1206 WP_001189549.1 conjugal transfer protein TraW -
E0E38_RS25065 55838..56458 - 621 WP_021516921.1 hypothetical protein -
E0E38_RS25070 56458..59502 - 3045 WP_021516922.1 hypothetical protein -
E0E38_RS25080 59797..60423 - 627 WP_000785703.1 hypothetical protein -
E0E38_RS26815 60530..60814 - 285 WP_001353683.1 hypothetical protein -
E0E38_RS25090 60838..61236 - 399 WP_000088813.1 hypothetical protein -
E0E38_RS25095 61283..61813 - 531 WP_000987021.1 conjugal transfer protein TraQ -
E0E38_RS25100 61810..62523 - 714 WP_000787002.1 conjugal transfer protein TraP -
E0E38_RS25105 62520..63857 - 1338 WP_021516923.1 conjugal transfer protein TraO -
E0E38_RS25110 63861..64835 - 975 WP_000547386.1 hypothetical protein VF
E0E38_RS25115 64846..65541 - 696 WP_001287545.1 DotI/IcmL family type IV secretion protein -
E0E38_RS25120 65553..65903 - 351 WP_001056367.1 hypothetical protein -
E0E38_RS25125 65920..69981 - 4062 WP_000842456.1 DUF5710 domain-containing protein -
E0E38_RS25130 70045..70335 - 291 WP_000817801.1 IcmT/TraK family protein -
E0E38_RS25135 70332..71480 - 1149 WP_000775210.1 putative protein YggR VF
E0E38_RS25140 71464..72300 - 837 WP_000745049.1 hypothetical protein VF
E0E38_RS25145 72297..72755 - 459 WP_001170111.1 DotD/TraH family lipoprotein -
E0E38_RS25150 72859..74061 - 1203 WP_000979993.1 conjugal transfer protein TraF -
E0E38_RS25155 74163..74984 - 822 WP_000845373.1 hypothetical protein -
E0E38_RS26690 75149..75343 - 195 Protein_86 integrase -
E0E38_RS25165 75457..76818 - 1362 WP_001168171.1 hypothetical protein VF
E0E38_RS25170 76836..77462 - 627 WP_000939245.1 prepilin peptidase -
E0E38_RS25175 77478..77963 - 486 WP_001080767.1 hypothetical protein VF
E0E38_RS25180 78008..78544 - 537 WP_000111534.1 hypothetical protein VF
E0E38_RS25185 78606..79700 - 1095 WP_000697158.1 type II secretion system F family protein -
E0E38_RS25190 79702..81210 - 1509 WP_000880805.1 Toxin coregulated pilus biosynthesis protein T VF
E0E38_RS25195 81314..81772 - 459 WP_000095885.1 hypothetical protein VF
E0E38_RS25200 81762..83057 - 1296 WP_000129882.1 type 4b pilus protein PilO2 -
E0E38_RS25205 83078..84697 - 1620 WP_001035565.1 Outer membrane lipoprotein BfpB VF
E0E38_RS25210 84729..85142 - 414 WP_124983997.1 hypothetical protein VF
E0E38_RS25215 85170..86240 - 1071 WP_000730430.1 hypothetical protein VF
E0E38_RS25220 86467..86802 - 336 WP_001335624.1 hypothetical protein -
E0E38_RS25225 86918..87160 - 243 WP_001271734.1 PilI type IV pilus biogenesis protein -
E0E38_RS25230 87241..88935 - 1695 WP_000482665.1 flotillin family protein -
E0E38_RS25235 88962..89582 - 621 WP_000176497.1 DUF1449 family protein -
E0E38_RS25245 89849..90511 - 663 WP_000154142.1 hypothetical protein -
E0E38_RS25250 90652..91293 - 642 WP_000335849.1 transcription termination/antitermination NusG family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance