MGE detailed information
MGE type: Prophage MGE length: 22736 bp
Accession: NZ_LR213458 Location: 2333947..2356682 Organism: Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 Replicon: chromosome
Accession: NZ_LR213458 Location: 2333947..2356682 Organism: Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E38_RS11560 () | 2330030..2330671 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| E0E38_RS11565 () | 2330727..2331905 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| E0E38_RS11570 () | 2332039..2332329 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| E0E38_RS11575 () | 2332396..2332752 | + | 357 | WP_001295500.1 | protein YebF | - |
| E0E38_RS11580 () | 2333079..2333738 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| E0E38_RS11585 () | 2333947..2336007 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| E0E38_RS11590 () | 2336004..2336666 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| E0E38_RS11595 () | 2336690..2337346 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| E0E38_RS11600 () | 2337448..2337678 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| E0E38_RS11605 () | 2337817..2338191 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| E0E38_RS11610 () | 2338195..2339067 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| E0E38_RS11615 () | 2339080..2339421 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 2339449..2339683 | - | 235 | - | - | Antitoxin Detail |
| - | 2339579..2339682 | + | 104 | - | - | Toxin Detail |
| E0E38_RS11620 () | 2339814..2340890 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| E0E38_RS11625 () | 2340927..2341172 | - | 246 | Protein_2229 | IS1 family transposase IS1R | Transposase |
| E0E38_RS11640 () | 2342553..2343308 | - | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| E0E38_RS11645 () | 2343325..2344860 | - | 1536 | WP_000447022.1 | IS21 family transposase ISSso4 | Transposase |
| E0E38_RS11650 () | 2345147..2345604 | - | 458 | Protein_2233 | IS1-like element IS1A family transposase | - |
| E0E38_RS11655 () | 2345633..2345893 | - | 261 | WP_077447296.1 | excisionase | - |
| E0E38_RS11660 () | 2346038..2347194 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| E0E38_RS11670 () | 2347310..2349025 | - | 1716 | WP_011310192.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| E0E38_RS11685 () | 2351034..2351207 | + | 174 | Protein_2238 | metallophosphoesterase | - |
| E0E38_RS11695 () | 2351973..2352278 | + | 306 | Protein_2240 | serine/threonine-protein phosphatase | - |
| E0E38_RS11700 () | 2352336..2353492 | + | 1157 | WP_130872889.1 | IS3 family transposase IS600 | Transposase |
| E0E38_RS11705 () | 2353534..2353734 | + | 201 | Protein_2242 | serine/threonine-protein phosphatase | - |
| E0E38_RS11710 () | 2353735..2353926 | - | 192 | WP_001296140.1 | YebW family protein | - |
| E0E38_RS11715 () | 2354031..2354189 | - | 159 | Protein_2244 | DUF1480 family protein | - |
| E0E38_RS11720 () | 2354247..2354944 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| E0E38_RS26010 () | 2354961..2355044 | - | 84 | Protein_2246 | DUF1480 family protein | - |
| E0E38_RS11725 () | 2355162..2356601 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| E0E38_RS11730 () | 2356682..2359315 | - | 2634 | WP_005138565.1 | lipid-binding membrane homeostasis protein YebT | - |
| E0E38_RS11735 () | 2359284..2360567 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| E0E38_RS11740 () | 2360697..2361194 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|