MGE detailed information
MGE type: Genomic_island MGE length: 13388 bp
Accession: NZ_LR213458 Location: 1291132..1304519 Organism: Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 Replicon: chromosome
Accession: NZ_LR213458 Location: 1291132..1304519 Organism: Shigella sonnei strain AUSMDU00008333 isolate AUSMDU00008333 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E38_RS06240 (1286201) | 1286201..1290409 | + | 4209 | WP_000508696.1 | RHS element core protein | - |
| E0E38_RS06245 (1290421) | 1290421..1290870 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| E0E38_RS06250 (1291132) | 1291132..1292268 | + | 1137 | Protein_1195 | ISAs1 family transposase ISEc1 | Transposase |
| E0E38_RS06255 (1292306) | 1292306..1292716 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| E0E38_RS06260 (1292716) | 1292716..1293093 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| E0E38_RS06265 (1293562) | 1293562..1294698 | + | 1137 | WP_000420787.1 | ISAs1 family transposase ISEc1 | Transposase |
| E0E38_RS06270 (1294740) | 1294740..1295510 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| E0E38_RS06275 (1295691) | 1295691..1296137 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| E0E38_RS06280 (1296180) | 1296180..1298624 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| E0E38_RS06285 (1298864) | 1298864..1299442 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| E0E38_RS06290 (1299648) | 1299648..1300415 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| E0E38_RS06295 (1300386) | 1300386..1301126 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| E0E38_RS06300 (1301282) | 1301282..1301560 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| E0E38_RS06305 (1301563) | 1301563..1301823 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| E0E38_RS06310 (1302009) | 1302009..1302782 | + | 774 | WP_127148796.1 | hypothetical protein | VF |
| E0E38_RS06320 (1303823) | 1303823..1303951 | + | 129 | Protein_1209 | ISAs1 family transposase | - |
| E0E38_RS06325 (1304022) | 1304022..1304519 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| E0E38_RS06330 (1304642) | 1304642..1306354 | - | 1713 | Protein_1211 | flagellar biosynthesis protein FlhA | - |
| E0E38_RS06335 (1306326) | 1306326..1307111 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| E0E38_RS06340 (1307182) | 1307182..1308237 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| E0E38_RS06345 (1308234) | 1308234..1308686 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| E0E38_RS06350 (1308932) | 1308932..1309453 | + | 522 | Protein_1215 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|