MGE detailed information
MGE type: Prophage MGE length: 48739 bp
Accession: NZ_LR213455 Location: 3648243..3696981 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: chromosome
Accession: NZ_LR213455 Location: 3648243..3696981 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E35_RS19020 (3643658) | 3643658..3644113 | - | 456 | WP_000194195.1 | hypothetical protein | - |
| E0E35_RS19025 (3644110) | 3644110..3644445 | - | 336 | Protein_3619 | DUF2773 domain-containing protein | - |
| E0E35_RS19030 (3644600) | 3644600..3644884 | - | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| E0E35_RS19035 (3644956) | 3644956..3645633 | - | 678 | WP_001276420.1 | AroM family protein | - |
| E0E35_RS19040 (3645891) | 3645891..3646082 | - | 192 | WP_001142439.1 | protein YaiA | - |
| E0E35_RS19045 (3646132) | 3646132..3646656 | - | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| E0E35_RS19050 (3646839) | 3646839..3647297 | - | 459 | WP_112324860.1 | YaiI/YqxD family protein | - |
| E0E35_RS19055 (3647417) | 3647417..3648226 | + | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| E0E35_RS19060 (3648243) | 3648243..3649358 | - | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| E0E35_RS26880 (3649509) | 3649509..3650244 | + | 736 | Protein_3627 | IS3 family transposase | - |
| E0E35_RS19075 (3650917) | 3650917..3652425 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| E0E35_RS19080 (3652509) | 3652509..3652988 | + | 480 | Protein_3629 | IS3 family transposase IS629 | Transposase |
| E0E35_RS19085 (3652972) | 3652972..3654170 | + | 1199 | WP_094092420.1 | IS3 family transposase ISSd1 | Transposase |
| E0E35_RS19090 (3654297) | 3654297..3654920 | + | 624 | WP_005060548.1 | hypothetical protein | - |
| E0E35_RS19095 (3654974) | 3654974..3656146 | - | 1173 | WP_000551008.1 | acyltransferase | - |
| E0E35_RS19100 (3656495) | 3656495..3657658 | - | 1164 | WP_000051894.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E0E35_RS19105 (3657844) | 3657844..3659000 | + | 1157 | WP_134797806.1 | IS3 family transposase IS600 | Transposase |
| E0E35_RS19115 (3659053) | 3659053..3659703 | + | 651 | WP_000554647.1 | hypothetical protein | - |
| E0E35_RS19120 (3659675) | 3659675..3660109 | + | 435 | WP_001223322.1 | tail fiber assembly protein | - |
| E0E35_RS19125 (3660882) | 3660882..3661931 | - | 1050 | WP_073828213.1 | acyltransferase family protein | - |
| E0E35_RS19130 (3662382) | 3662382..3663572 | + | 1191 | WP_001111520.1 | IS4 family transposase ISSfl9 | Transposase |
| E0E35_RS19135 (3663962) | 3663962..3665422 | - | 1461 | WP_000590789.1 | hypothetical protein | VF |
| E0E35_RS19140 (3665419) | 3665419..3666348 | - | 930 | WP_000703655.1 | Prophage bactoprenol glucosyl transferase | VF |
| E0E35_RS19145 (3666345) | 3666345..3666707 | - | 363 | WP_000915845.1 | Prophage bactoprenol-linked glucose translocase | VF |
| E0E35_RS19150 (3666969) | 3666969..3667325 | - | 357 | Protein_3642 | integrase | - |
| E0E35_RS19155 (3667371) | 3667371..3668249 | - | 879 | Protein_3643 | IS3 family transposase IS600 | Transposase |
| E0E35_RS19165 (3668305) | 3668305..3668982 | + | 678 | WP_001340280.1 | IS66 family transposase ISCro1 | Transposase |
| E0E35_RS19170 (3668982) | 3668982..3669329 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| E0E35_RS19175 (3669349) | 3669349..3670920 | + | 1572 | WP_000381321.1 | IS66 family transposase ISCro1 | Transposase |
| E0E35_RS19180 (3670951) | 3670951..3671234 | - | 284 | Protein_3647 | IS3 family transposase ISSfl10 | Transposase |
| E0E35_RS26885 (3671397) | 3671397..3672132 | + | 736 | Protein_3648 | IS3 family transposase | - |
| E0E35_RS19195 (3672805) | 3672805..3674313 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| E0E35_RS19200 (3674397) | 3674397..3674876 | + | 480 | Protein_3650 | IS3 family transposase IS629 | Transposase |
| E0E35_RS19205 (3674860) | 3674860..3675219 | + | 360 | WP_000563002.1 | hypothetical protein | - |
| E0E35_RS19210 (3675219) | 3675219..3675524 | + | 306 | WP_000206732.1 | protein YfdT | - |
| E0E35_RS26890 (3675440) | 3675440..3675874 | + | 435 | WP_077941726.1 | helix-turn-helix domain-containing protein | - |
| E0E35_RS19220 (3675796) | 3675796..3676467 | + | 672 | Protein_3654 | hypothetical protein ; Integrase | Integrase |
| E0E35_RS19225 (3676533) | 3676533..3677689 | + | 1157 | WP_094081493.1 | IS3 family transposase IS600 | Transposase |
| E0E35_RS19230 (3677722) | 3677722..3678180 | + | 459 | Protein_3656 | site-specific integrase | - |
| E0E35_RS19240 (3678385) | 3678385..3679638 | - | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E0E35_RS19245 (3679650) | 3679650..3680753 | - | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| E0E35_RS19255 (3681817) | 3681817..3682872 | + | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| E0E35_RS19260 (3682911) | 3682911..3683312 | - | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| - (3684030) | 3684030..3684110 | - | 81 | NuclAT_8 | - | - |
| - (3684030) | 3684030..3684110 | - | 81 | NuclAT_8 | - | - |
| - (3684030) | 3684030..3684110 | - | 81 | NuclAT_8 | - | - |
| - (3684030) | 3684030..3684110 | - | 81 | NuclAT_8 | - | - |
| E0E35_RS19265 (3683370) | 3683370..3684614 | - | 1245 | WP_000189558.1 | esterase FrsA | - |
| E0E35_RS19270 (3684706) | 3684706..3685164 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E0E35_RS19275 (3685426) | 3685426..3686883 | + | 1458 | WP_001293030.1 | cytosol nonspecific dipeptidase | - |
| E0E35_RS19280 (3686940) | 3686940..3687554 | - | 615 | Protein_3665 | peptide chain release factor H | - |
| E0E35_RS19285 (3687616) | 3687616..3688659 | - | 1044 | WP_005053205.1 | RNA ligase RtcB family protein | - |
| E0E35_RS19290 (3688905) | 3688905..3689357 | - | 453 | WP_001059860.1 | GNAT family N-acetyltransferase | - |
| E0E35_RS19295 (3689367) | 3689367..3689765 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E0E35_RS19300 (3689768) | 3689768..3690061 | - | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E0E35_RS19305 (3690113) | 3690113..3691168 | - | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| E0E35_RS19310 (3691239) | 3691239..3692024 | - | 786 | WP_000207560.1 | Chemotaxis protein LafU | VF |
| E0E35_RS19315 (3691996) | 3691996..3693708 | + | 1713 | Protein_3672 | Flagellar biosynthesis protein FlhA | VF |
| E0E35_RS19320 (3693925) | 3693925..3694422 | - | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| E0E35_RS19325 (3694598) | 3694598..3695119 | - | 522 | Protein_3674 | hypothetical protein | VF |
| E0E35_RS19330 (3695503) | 3695503..3696243 | + | 741 | WP_001225676.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| E0E35_RS19335 (3696214) | 3696214..3696981 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| E0E35_RS19340 (3697187) | 3697187..3697765 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| E0E35_RS19345 (3698005) | 3698005..3700449 | + | 2445 | WP_000973114.1 | acyl-CoA dehydrogenase FadE | - |
| E0E35_RS19350 (3700492) | 3700492..3700938 | - | 447 | WP_005100645.1 | Ivy family C-type lysozyme inhibitor | - |
| E0E35_RS19355 (3701119) | 3701119..3701889 | + | 771 | WP_001139559.1 | 2-oxoglutaramate amidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|