MGE detailed information
MGE type: Prophage MGE length: 24304 bp
Accession: NZ_LR213455 Location: 2304727..2329030 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: chromosome
Accession: NZ_LR213455 Location: 2304727..2329030 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E35_RS11800 (2299981) | 2299981..2300646 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| E0E35_RS11805 (2300858) | 2300858..2301292 | + | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| E0E35_RS11810 (2301312) | 2301312..2301695 | + | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| E0E35_RS11815 (2301727) | 2301727..2301945 | + | 219 | WP_000803661.1 | multiple antibiotic resistance protein MarB | - |
| E0E35_RS11820 (2301976) | 2301976..2302875 | - | 900 | WP_000087224.1 | O-acetylserine/cysteine exporter | - |
| E0E35_RS11825 (2303142) | 2303142..2304257 | + | 1116 | Protein_2240 | efflux MFS transporter YdeE | - |
| E0E35_RS11830 (2304384) | 2304384..2304479 | + | 96 | WP_000901367.1 | protein MgtS | - |
| E0E35_RS26735 (2304479) | 2304479..2304582 | + | 104 | Protein_2242 | protein MgtT | - |
| E0E35_RS11835 (2304727) | 2304727..2305883 | - | 1157 | Protein_2243 | IS3 family transposase ISSd1 | Transposase |
| E0E35_RS11840 (2305949) | 2305949..2306173 | - | 225 | Protein_2244 | YdeI family stress tolerance OB fold protein | - |
| E0E35_RS11845 (2306449) | 2306449..2306967 | + | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| E0E35_RS11850 (2307012) | 2307012..2309057 | - | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| E0E35_RS11855 (2309194) | 2309194..2309940 | + | 747 | WP_005050098.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| E0E35_RS11860 (2310029) | 2310029..2310715 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| E0E35_RS11865 (2310893) | 2310893..2311096 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| E0E35_RS11870 (2311132) | 2311132..2312592 | - | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| E0E35_RS11875 (2312681) | 2312681..2313700 | - | 1020 | Protein_2251 | MHS family MFS transporter YdfJ | - |
| E0E35_RS11880 (2313762) | 2313762..2314918 | + | 1157 | Protein_2252 | IS3 family transposase ISSd1 | Transposase |
| E0E35_RS11885 (2314915) | 2314915..2315220 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| E0E35_RS11890 (2315245) | 2315245..2315484 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| E0E35_RS11895 (2315484) | 2315484..2315771 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| E0E35_RS11900 (2315843) | 2315843..2315998 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| E0E35_RS11905 (2316216) | 2316216..2316467 | + | 252 | WP_000980987.1 | protein Rem | - |
| E0E35_RS11910 (2316534) | 2316534..2316812 | + | 279 | Protein_2258 | hypothetical protein | - |
| E0E35_RS11915 (2316814) | 2316814..2317863 | + | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| E0E35_RS11920 (2317876) | 2317876..2318232 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E0E35_RS11925 (2318247) | 2318247..2319068 | + | 822 | WP_000762882.1 | antitermination protein | - |
| E0E35_RS11945 (2319989) | 2319989..2320097 | + | 109 | Protein_2262 | DUF3927 family protein | - |
| E0E35_RS11950 (2320378) | 2320378..2320713 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| E0E35_RS11955 (2320973) | 2320973..2321158 | + | 186 | Protein_2264 | DUF1737 domain-containing protein | - |
| E0E35_RS26100 (2321158) | 2321158..2321319 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| E0E35_RS11960 (2321469) | 2321469..2321648 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| E0E35_RS11965 (2321673) | 2321673..2322551 | - | 879 | Protein_2267 | IS3 family transposase IS600 | Transposase |
| E0E35_RS11975 (2323322) | 2323322..2324071 | + | 750 | Protein_2269 | Type 1 fimbrin D-mannose specific adhesin | VF |
| E0E35_RS11980 (2324405) | 2324405..2326684 | + | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| E0E35_RS11985 (2326932) | 2326932..2327135 | + | 204 | WP_000543395.1 | two-component system connector SafA | - |
| E0E35_RS11990 (2327203) | 2327203..2327964 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| E0E35_RS11995 (2328366) | 2328366..2328512 | + | 147 | Protein_2273 | sulfatase | - |
| E0E35_RS12005 (2329279) | 2329279..2329758 | - | 480 | Protein_2275 | cupin domain-containing protein | - |
| E0E35_RS12010 (2330077) | 2330077..2330841 | + | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| E0E35_RS12015 (2330861) | 2330861..2331799 | + | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| E0E35_RS12020 (2331855) | 2331855..2333144 | + | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| E0E35_RS12025 (2333141) | 2333141..2333434 | + | 294 | WP_000081083.1 | ferredoxin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|