MGE detailed information
MGE type: Prophage MGE length: 40207 bp
Accession: NZ_LR213455 Location: 1900774..1940980 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: chromosome
Accession: NZ_LR213455 Location: 1900774..1940980 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E35_RS09515 () | 1895900..1897527 | + | 1628 | Protein_1818 | toxic metabolite efflux MATE transporter YeeO | - |
| E0E35_RS09525 () | 1898159..1898875 | - | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| E0E35_RS09530 () | 1899218..1900672 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| E0E35_RS09535 () | 1900774..1900980 | - | 207 | WP_000466572.1 | hypothetical protein | - |
| E0E35_RS09540 () | 1900981..1902180 | - | 1200 | Protein_1822 | IS3 family transposase IS600 | Transposase |
| E0E35_RS09545 () | 1902245..1902751 | - | 507 | Protein_1823 | MFS transporter | - |
| E0E35_RS09550 () | 1902807..1903975 | + | 1169 | WP_094081534.1 | IS3 family transposase ISLad1 | Transposase |
| E0E35_RS09555 () | 1904082..1905344 | - | 1263 | Protein_1825 | Prophage integrase IntA ; Integrase | Integrase |
| E0E35_RS09565 () | 1905682..1906479 | - | 798 | WP_001325918.1 | DgsA anti-repressor MtfA | - |
| E0E35_RS09575 () | 1906690..1907740 | - | 1051 | Protein_1827 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E0E35_RS09580 () | 1907740..1907880 | - | 141 | Protein_1828 | DUF4224 domain-containing protein | - |
| E0E35_RS09585 () | 1907907..1908323 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - | 1908905..1908963 | - | 59 | - | - | Antitoxin Detail |
| E0E35_RS09600 () | 1908975..1909130 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| E0E35_RS09610 () | 1909298..1909576 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| E0E35_RS09615 () | 1909578..1910636 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| E0E35_RS09620 () | 1910637..1911002 | + | 366 | WP_000140020.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E0E35_RS09625 () | 1910999..1911687 | + | 689 | Protein_1834 | bacteriophage antitermination protein Q | - |
| E0E35_RS09655 () | 1912483..1912698 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| E0E35_RS09660 () | 1912797..1913471 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS09665 () | 1913468..1913818 | + | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS09670 () | 1913815..1914627 | + | 813 | Protein_1838 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS09675 () | 1914693..1915849 | + | 1157 | WP_094105050.1 | IS3 family transposase IS600 | Transposase |
| E0E35_RS09680 () | 1915874..1916233 | + | 360 | Protein_1840 | hypothetical protein | - |
| E0E35_RS09685 () | 1916243..1916404 | + | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| E0E35_RS09690 () | 1916401..1917897 | + | 1497 | WP_000155744.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| E0E35_RS09695 () | 1917897..1918253 | + | 357 | WP_001062338.1 | phage tail tube protein | - |
| E0E35_RS09700 () | 1918253..1918588 | + | 336 | WP_001251340.1 | phage tail assembly protein | - |
| E0E35_RS09705 () | 1918673..1920622 | + | 1950 | WP_000785377.1 | phage tail tape measure protein | - |
| E0E35_RS09710 () | 1920690..1921172 | + | 483 | WP_000594909.1 | hypothetical protein | - |
| E0E35_RS09720 () | 1922020..1922877 | + | 858 | Protein_1848 | IS3 family transposase IS600 | Transposase |
| E0E35_RS09725 () | 1922918..1923397 | + | 480 | Protein_1849 | DUF4376 domain-containing protein | - |
| E0E35_RS09735 () | 1923577..1925220 | - | 1644 | WP_014532281.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| E0E35_RS09740 () | 1925536..1926204 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| E0E35_RS09745 () | 1926261..1926530 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| E0E35_RS09755 () | 1927608..1928258 | - | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| E0E35_RS09760 () | 1928516..1929151 | - | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| E0E35_RS09765 () | 1929152..1930156 | - | 1005 | Protein_1855 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| E0E35_RS09770 () | 1930265..1930678 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| E0E35_RS09775 () | 1930811..1931482 | + | 672 | WP_001347103.1 | Transcriptional regulatory protein HprR | VF |
| E0E35_RS09780 () | 1931482..1932840 | + | 1359 | WP_000826714.1 | two-component system sensor histidine kinase HprS | - |
| E0E35_RS09785 () | 1932948..1933799 | - | 852 | WP_000218218.1 | protein deglycase HchA | - |
| E0E35_RS09795 () | 1935170..1935349 | - | 180 | Protein_1861 | porin | - |
| E0E35_RS09800 () | 1935443..1936671 | + | 1229 | WP_111778310.1 | IS3 family transposase IS2 | Transposase |
| E0E35_RS09805 () | 1936680..1937444 | - | 765 | Protein_1863 | porin | - |
| E0E35_RS09810 () | 1937510..1938657 | + | 1148 | WP_119211970.1 | IS3 family transposase ISEhe3 | Transposase |
| E0E35_RS09815 () | 1938658..1938915 | + | 258 | WP_032155863.1 | cell division protein DrpB | - |
| E0E35_RS09820 () | 1938994..1939495 | + | 502 | Protein_1866 | HD domain-containing protein | - |
| E0E35_RS09825 () | 1939562..1940980 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| E0E35_RS09830 () | 1940961..1941431 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| E0E35_RS09835 () | 1941420..1942340 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| E0E35_RS09840 () | 1942513..1943430 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| E0E35_RS09845 () | 1943509..1943691 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| E0E35_RS09850 () | 1943862..1945556 | + | 1695 | Protein_1872 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|