MGE detailed information
MGE type: Prophage MGE length: 46564 bp
Accession: NZ_LR213452 Location: 3466450..3513013 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Accession: NZ_LR213452 Location: 3466450..3513013 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E33_RS18035 () | 3461542..3462312 | - | 771 | WP_001139559.1 | 2-oxoglutaramate amidase | - |
| E0E33_RS18040 () | 3462493..3462939 | + | 447 | WP_005100645.1 | Ivy family C-type lysozyme inhibitor | - |
| E0E33_RS18045 () | 3462982..3465426 | - | 2445 | Protein_3434 | acyl-CoA dehydrogenase FadE | - |
| E0E33_RS18050 () | 3465666..3466244 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| E0E33_RS18055 () | 3466450..3467217 | + | 768 | WP_005060449.1 | class II glutamine amidotransferase | - |
| E0E33_RS18060 () | 3467188..3467928 | - | 741 | WP_001225676.1 | murein L,D-transpeptidase | - |
| E0E33_RS18065 () | 3468312..3468833 | + | 522 | Protein_3438 | hypothetical protein | VF |
| E0E33_RS18070 () | 3468887..3470599 | - | 1713 | Protein_3439 | Flagellar biosynthesis protein FlhA | VF |
| E0E33_RS18075 () | 3470571..3471356 | + | 786 | WP_000207560.1 | Chemotaxis protein LafU | VF |
| E0E33_RS18080 () | 3471427..3472482 | + | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| E0E33_RS18085 () | 3472534..3472827 | + | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| E0E33_RS18090 () | 3472830..3473228 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| E0E33_RS18095 () | 3473238..3473690 | + | 453 | WP_001059846.1 | GNAT family N-acetyltransferase | - |
| E0E33_RS18100 () | 3473936..3474979 | + | 1044 | WP_005060486.1 | RNA ligase RtcB family protein | - |
| E0E33_RS18105 () | 3475041..3475655 | + | 615 | Protein_3446 | peptide chain release factor H | - |
| E0E33_RS18110 () | 3475712..3477169 | - | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| E0E33_RS18115 () | 3477431..3477889 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| E0E33_RS18120 () | 3477981..3479225 | + | 1245 | WP_000189557.1 | esterase FrsA | - |
| - () | 3478485..3478565 | + | 81 | NuclAT_8 | - | - |
| - () | 3478485..3478565 | + | 81 | NuclAT_8 | - | - |
| - () | 3478485..3478565 | + | 81 | NuclAT_8 | - | - |
| - () | 3478485..3478565 | + | 81 | NuclAT_8 | - | - |
| E0E33_RS18125 () | 3479283..3479684 | + | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| E0E33_RS18130 () | 3479723..3480778 | - | 1056 | WP_128832292.1 | phosphoporin PhoE | - |
| E0E33_RS18135 () | 3480954..3481651 | + | 698 | Protein_3452 | IS1 family transposase IS1X2 | Transposase |
| E0E33_RS18140 () | 3481842..3482945 | + | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| E0E33_RS18145 () | 3482957..3484210 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| E0E33_RS18155 () | 3484415..3485383 | - | 969 | Protein_3455 | Tyrosine recombinase XerD ; Integrase | Integrase |
| E0E33_RS18165 () | 3486648..3487160 | + | 513 | Protein_3457 | hypothetical protein | - |
| E0E33_RS18170 () | 3487132..3487572 | + | 441 | WP_001223320.1 | tail assembly chaperone | - |
| E0E33_RS18175 () | 3487806..3488111 | - | 306 | WP_000217914.1 | hypothetical protein | - |
| E0E33_RS18180 () | 3488108..3488348 | - | 241 | Protein_3460 | gtrI domain protein | - |
| E0E33_RS18185 () | 3488375..3489326 | - | 952 | Protein_3461 | gtrI | - |
| E0E33_RS18190 () | 3489329..3490249 | - | 921 | WP_000703663.1 | Prophage bactoprenol glucosyl transferase | VF |
| E0E33_RS18195 () | 3490246..3490608 | - | 363 | WP_000915849.1 | GtrA family protein | - |
| E0E33_RS18200 () | 3490870..3491238 | - | 369 | Protein_3464 | site-specific integrase | - |
| E0E33_RS18210 () | 3492591..3493800 | + | 1210 | Protein_3466 | IS3 family transposase IS629 | Transposase |
| E0E33_RS18215 () | 3493784..3494143 | + | 360 | WP_000563002.1 | hypothetical protein | - |
| E0E33_RS18220 () | 3494143..3494448 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| E0E33_RS18225 () | 3494448..3494606 | + | 159 | Protein_3469 | IS607 family transposase ISSto13 | Transposase |
| E0E33_RS18230 () | 3494680..3495848 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| E0E33_RS18235 () | 3495880..3496167 | + | 288 | WP_000343120.1 | hypothetical protein | - |
| E0E33_RS18245 () | 3497550..3498464 | + | 915 | Protein_3473 | type VI secretion system-associated protein TagK | - |
| E0E33_RS18250 () | 3498451..3499083 | + | 633 | Protein_3474 | impE family protein | - |
| E0E33_RS18255 () | 3499084..3499281 | + | 198 | WP_109273791.1 | hypothetical protein | - |
| E0E33_RS18260 () | 3499278..3499772 | + | 495 | WP_001276640.1 | hypothetical protein | VF |
| E0E33_RS18265 () | 3499788..3501671 | + | 1884 | WP_000371479.1 | type VI secretion system baseplate subunit TssF | - |
| E0E33_RS18270 () | 3501668..3502653 | + | 986 | Protein_3478 | hypothetical protein | VF |
| E0E33_RS18275 () | 3502664..3503710 | + | 1047 | WP_000402248.1 | hypothetical protein | VF |
| E0E33_RS18285 () | 3504050..3504781 | - | 732 | WP_005060334.1 | DNA polymerase III subunit epsilon | - |
| E0E33_RS18290 () | 3504846..3505313 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| E0E33_RS18295 () | 3505310..3506032 | - | 723 | WP_005060310.1 | class I SAM-dependent methyltransferase | - |
| E0E33_RS18300 () | 3506066..3506821 | + | 756 | WP_001052754.1 | hydroxyacylglutathione hydrolase | - |
| E0E33_RS18305 () | 3506893..3508251 | + | 1359 | WP_000644678.1 | Membrane-bound lytic murein transglycosylase D | VF |
| E0E33_RS18310 () | 3508299..3509069 | - | 771 | WP_000211683.1 | class I SAM-dependent methyltransferase | - |
| E0E33_RS18315 () | 3509147..3509947 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| E0E33_RS18320 () | 3510188..3511102 | + | 915 | WP_000648578.1 | HTH-type transcriptional regulator DmlR | VF |
| E0E33_RS18325 () | 3511152..3512261 | + | 1110 | Protein_3488 | IS4 family transposase IS4 | Transposase |
| E0E33_RS18330 () | 3512317..3513013 | + | 697 | Protein_3489 | IS1 family transposase IS1X2 | Transposase |
| E0E33_RS18335 () | 3513029..3513274 | + | 246 | Protein_3490 | IS4 family transposase | - |
| E0E33_RS18340 () | 3513313..3514116 | - | 804 | WP_000997035.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|