MGE detailed information
MGE type: Prophage MGE length: 21837 bp
Accession: NZ_LR213452 Location: 2368005..2389841 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Accession: NZ_LR213452 Location: 2368005..2389841 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E33_RS12140 () | 2364553..2365524 | + | 972 | WP_000150544.1 | PTS mannose transporter subunit IIAB | - |
| E0E33_RS12145 () | 2365587..2366387 | + | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| E0E33_RS12150 () | 2366400..2367251 | + | 852 | WP_001331209.1 | PTS mannose transporter subunit IID | - |
| E0E33_RS12155 () | 2367306..2367782 | + | 477 | WP_000156246.1 | DUF986 family protein | - |
| E0E33_RS12160 () | 2367811..2368508 | + | 698 | Protein_2318 | IS1 family transposase IS1X2 | Transposase |
| E0E33_RS12165 () | 2368853..2369741 | + | 889 | Protein_2319 | Rha family transcriptional regulator | - |
| E0E33_RS12170 () | 2369783..2371011 | + | 1229 | WP_134797556.1 | IS3 family transposase IS2 | Transposase |
| E0E33_RS12175 () | 2371088..2371309 | + | 222 | WP_000560226.1 | killing protein KilR | - |
| E0E33_RS12180 () | 2371303..2371479 | + | 177 | WP_000245528.1 | hypothetical protein | - |
| E0E33_RS12185 () | 2371554..2371829 | + | 276 | WP_005049830.1 | hypothetical protein | - |
| E0E33_RS12190 () | 2371929..2373344 | + | 1416 | Protein_2324 | exodeoxyribonuclease VIII | - |
| E0E33_RS12200 () | 2374656..2374871 | + | 216 | Protein_2326 | host-nuclease inhibitor protein Gam | - |
| E0E33_RS12205 () | 2374945..2376113 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| E0E33_RS12235 () | 2376828..2377334 | - | 507 | WP_045178261.1 | ORF6N domain-containing protein | - |
| E0E33_RS12245 () | 2378599..2378784 | - | 186 | WP_005049799.1 | hypothetical protein | - |
| E0E33_RS12250 () | 2378925..2379479 | - | 555 | WP_000640143.1 | DUF1133 family protein | - |
| E0E33_RS12255 () | 2379476..2379766 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| E0E33_RS12260 () | 2379766..2380365 | - | 600 | WP_000940329.1 | DUF1367 family protein | - |
| E0E33_RS12265 () | 2380499..2381196 | + | 698 | Protein_2334 | IS1 family transposase IS1X2 | Transposase |
| E0E33_RS12275 () | 2381702..2381857 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 2381869..2381927 | + | 59 | - | - | Antitoxin Detail |
| E0E33_RS12280 () | 2382312..2382677 | - | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| E0E33_RS12285 () | 2382677..2383342 | - | 666 | WP_000208062.1 | hypothetical protein | - |
| E0E33_RS12290 () | 2383339..2383704 | - | 366 | WP_001229298.1 | HNH endonuclease | - |
| E0E33_RS12295 () | 2383706..2383924 | - | 219 | WP_000256998.1 | DUF4014 family protein | - |
| E0E33_RS12300 () | 2384017..2384373 | - | 357 | WP_005048249.1 | hypothetical protein | - |
| E0E33_RS12305 () | 2384431..2384853 | - | 423 | WP_001118167.1 | DUF977 family protein | - |
| E0E33_RS12310 () | 2384868..2385611 | - | 744 | WP_000788999.1 | ATP-binding protein | - |
| E0E33_RS24035 () | 2386104..2386358 | - | 255 | Protein_2343 | hypothetical protein | - |
| E0E33_RS12320 () | 2386450..2387678 | + | 1229 | WP_134797556.1 | IS3 family transposase IS2 | Transposase |
| E0E33_RS12325 () | 2387692..2388102 | - | 411 | Protein_2345 | YdaU family protein | - |
| E0E33_RS12330 () | 2388206..2389362 | + | 1157 | WP_130862202.1 | IS3 family transposase IS600 | Transposase |
| E0E33_RS12335 () | 2389359..2389841 | - | 483 | WP_000817712.1 | HTH-type transcriptional regulator PgrR | VF |
| E0E33_RS12340 () | 2389979..2390899 | + | 921 | WP_000981715.1 | alpha/beta hydrolase | - |
| E0E33_RS12350 () | 2390899..2391834 | + | 936 | Protein_2349 | alpha/beta hydrolase | - |
| E0E33_RS12355 () | 2391852..2392490 | + | 639 | WP_005049763.1 | SDR family oxidoreductase | - |
| E0E33_RS12360 () | 2392781..2393509 | + | 729 | WP_005061999.1 | murein tripeptide amidase MpaA | - |
| E0E33_RS12365 () | 2393484..2394443 | - | 960 | WP_005062222.1 | L-Ala-D/L-Glu epimerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|