MGE detailed information
MGE type: Prophage MGE length: 41646 bp
Accession: NZ_LR213452 Location: 1765792..1807437 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Accession: NZ_LR213452 Location: 1765792..1807437 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E33_RS08815 () | 1760918..1762545 | + | 1628 | Protein_1691 | toxic metabolite efflux MATE transporter YeeO | - |
| E0E33_RS08825 () | 1763177..1763893 | - | 717 | WP_000532920.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| E0E33_RS08830 () | 1764236..1765690 | - | 1455 | WP_001060217.1 | AMP nucleosidase | - |
| E0E33_RS08835 () | 1765792..1765998 | - | 207 | WP_000466572.1 | hypothetical protein | - |
| E0E33_RS08845 () | 1767260..1767763 | - | 504 | WP_005063096.1 | MFS transporter | - |
| E0E33_RS08850 () | 1767825..1768993 | + | 1169 | WP_128599161.1 | IS3 family transposase ISLad1 | Transposase |
| E0E33_RS08855 () | 1769100..1770362 | - | 1263 | Protein_1698 | Prophage integrase IntA ; Integrase | Integrase |
| E0E33_RS08865 () | 1770700..1771497 | - | 798 | WP_024260703.1 | DgsA anti-repressor MtfA | - |
| E0E33_RS08875 () | 1771708..1772748 | - | 1041 | WP_005096324.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| E0E33_RS08880 () | 1772748..1772888 | - | 141 | Protein_1701 | DUF4224 domain-containing protein | - |
| E0E33_RS08885 () | 1772915..1773331 | + | 417 | WP_005069274.1 | hypothetical protein | - |
| - () | 1773913..1773971 | - | 59 | - | - | Antitoxin Detail |
| E0E33_RS08900 () | 1773983..1774138 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| E0E33_RS08910 () | 1774306..1774584 | + | 279 | WP_011069426.1 | hypothetical protein | - |
| E0E33_RS08915 () | 1774586..1775644 | + | 1059 | WP_001265248.1 | DUF968 domain-containing protein | - |
| E0E33_RS08920 () | 1775645..1776010 | + | 366 | WP_128832266.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E0E33_RS08925 () | 1776007..1776690 | + | 684 | WP_005049343.1 | antiterminator | - |
| E0E33_RS08955 () | 1777491..1777706 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| E0E33_RS08960 () | 1777805..1778479 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E33_RS08965 () | 1778476..1778826 | + | 351 | WP_005049241.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E33_RS08970 () | 1778823..1779635 | + | 813 | Protein_1711 | IS66 family transposase ISSfl3 | Transposase |
| E0E33_RS08975 () | 1779789..1780112 | + | 324 | WP_000924704.1 | head-tail connector protein | - |
| E0E33_RS08980 () | 1780109..1780525 | + | 417 | WP_000702444.1 | phage head closure protein | - |
| E0E33_RS08985 () | 1780491..1781015 | + | 525 | WP_001076765.1 | hypothetical protein | - |
| E0E33_RS08990 () | 1781012..1781236 | + | 225 | Protein_1715 | hypothetical protein | - |
| E0E33_RS08995 () | 1781302..1782458 | + | 1157 | WP_094081558.1 | IS3 family transposase IS600 | Transposase |
| E0E33_RS09000 () | 1782501..1782842 | + | 342 | Protein_1717 | hypothetical protein | - |
| E0E33_RS09005 () | 1782852..1783013 | + | 162 | WP_000497744.1 | DUF2635 domain-containing protein | - |
| E0E33_RS09010 () | 1783010..1784506 | + | 1497 | WP_000155744.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| E0E33_RS09015 () | 1784506..1784862 | + | 357 | WP_001062338.1 | phage tail tube protein | - |
| E0E33_RS09020 () | 1784862..1785197 | + | 336 | WP_001251340.1 | phage tail assembly protein | - |
| E0E33_RS09025 () | 1785282..1787231 | + | 1950 | WP_000785377.1 | phage tail tape measure protein | - |
| E0E33_RS09030 () | 1787299..1787781 | + | 483 | WP_000594909.1 | hypothetical protein | - |
| E0E33_RS09035 () | 1787874..1788571 | - | 698 | Protein_1724 | IS1 family transposase IS1X2 | Transposase |
| E0E33_RS09040 () | 1788629..1789486 | + | 858 | Protein_1725 | IS3 family transposase IS600 | Transposase |
| E0E33_RS09045 () | 1789527..1790006 | + | 480 | Protein_1726 | DUF4376 domain-containing protein | - |
| E0E33_RS09055 () | 1790186..1791828 | - | 1643 | Protein_1727 | E3 ubiquitin-protein ligase ipaH3 | VF |
| E0E33_RS09060 () | 1792144..1792812 | - | 669 | WP_000239881.1 | class I SAM-dependent methyltransferase | - |
| E0E33_RS09065 () | 1792869..1793138 | + | 270 | WP_000937511.1 | tail fiber assembly protein | - |
| E0E33_RS09075 () | 1794216..1794866 | - | 651 | WP_001007781.1 | metal-binding protein ZinT | - |
| E0E33_RS09080 () | 1795124..1795759 | - | 636 | WP_001240061.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| E0E33_RS09085 () | 1795760..1796764 | - | 1005 | Protein_1732 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
| E0E33_RS09090 () | 1796873..1797286 | - | 414 | WP_000920127.1 | hydroxyisourate hydrolase | - |
| E0E33_RS09095 () | 1797419..1798090 | + | 672 | WP_001347103.1 | Transcriptional regulatory protein HprR | VF |
| E0E33_RS09100 () | 1798090..1799037 | + | 948 | Protein_1735 | two-component system sensor histidine kinase HprS | - |
| E0E33_RS09105 () | 1799049..1799746 | - | 698 | Protein_1736 | IS1 family transposase IS1X2 | Transposase |
| E0E33_RS09110 () | 1800374..1800553 | - | 180 | Protein_1737 | porin | - |
| E0E33_RS09115 () | 1800647..1801875 | + | 1229 | WP_111778310.1 | IS3 family transposase IS2 | Transposase |
| E0E33_RS09120 () | 1801884..1802648 | - | 765 | Protein_1739 | porin | - |
| E0E33_RS09125 () | 1802714..1802824 | + | 111 | Protein_1740 | IS3 family transposase ISEhe3 | Transposase |
| E0E33_RS09130 () | 1802893..1804061 | + | 1169 | WP_000747032.1 | IS3 family transposase ISLad1 | Transposase |
| E0E33_RS09135 () | 1803985..1805114 | + | 1130 | WP_128599135.1 | IS3 family transposase ISEhe3 | Transposase |
| E0E33_RS09140 () | 1805115..1805372 | + | 258 | WP_032155863.1 | hypothetical protein | - |
| E0E33_RS09145 () | 1805412..1805952 | + | 541 | Protein_1744 | phosphohydrolase | - |
| E0E33_RS09150 () | 1806019..1807437 | + | 1419 | WP_001157215.1 | DNA-cytosine methyltransferase | - |
| E0E33_RS09155 () | 1807418..1807888 | + | 471 | WP_000228688.1 | VSPR family DNA mismatch endonuclease | - |
| E0E33_RS09160 () | 1807877..1808797 | - | 921 | WP_001212270.1 | drug/metabolite exporter YedA | - |
| E0E33_RS09165 () | 1808970..1809887 | + | 918 | WP_000922688.1 | DUF808 domain-containing protein | - |
| E0E33_RS09170 () | 1809966..1810148 | + | 183 | WP_000009302.1 | DUF2158 domain-containing protein | - |
| E0E33_RS09175 () | 1810319..1812013 | + | 1695 | Protein_1750 | cellulose biosynthesis regulator YedQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|