MGE detailed information
MGE type: Prophage MGE length: 47060 bp
Accession: NZ_LR134340 Location: 2298977..2346036 Organism: Escherichia marmotae strain NCTC11133 Replicon: chromosome
Accession: NZ_LR134340 Location: 2298977..2346036 Organism: Escherichia marmotae strain NCTC11133 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL192_RS10965 () | 2294295..2294729 | + | 435 | WP_010376343.1 | universal stress protein UspF | - |
| EL192_RS10970 () | 2295315..2296229 | + | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| EL192_RS10975 () | 2296229..2297056 | + | 828 | WP_000983721.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| EL192_RS10980 () | 2297053..2297910 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| EL192_RS10985 () | 2297907..2298764 | + | 858 | WP_000968131.1 | iron/manganese ABC transporter permease subunit SitD | - |
| EL192_RS10995 () | 2298977..2299561 | - | 585 | WP_001824772.1 | tail fiber assembly protein | - |
| EL192_RS11000 () | 2299561..2302632 | - | 3072 | WP_016262033.1 | phage tail protein | - |
| EL192_RS11005 () | 2302697..2303296 | - | 600 | WP_016262034.1 | hypothetical protein | VF |
| EL192_RS11010 () | 2303367..2306780 | - | 3414 | WP_016262035.1 | host specificity protein J | - |
| EL192_RS11015 () | 2306841..2307473 | - | 633 | WP_072024144.1 | tail assembly protein | - |
| EL192_RS11020 () | 2307410..2308153 | - | 744 | WP_032141343.1 | C40 family peptidase | - |
| EL192_RS11025 () | 2308158..2308856 | - | 699 | WP_016262038.1 | phage minor tail protein L | - |
| EL192_RS11030 () | 2308856..2309194 | - | 339 | WP_000024051.1 | phage tail protein | - |
| EL192_RS11035 () | 2309187..2312420 | - | 3234 | WP_016262039.1 | phage tail tape measure protein | - |
| EL192_RS11040 () | 2312586..2312786 | - | 201 | WP_001755909.1 | hypothetical protein | - |
| EL192_RS11045 () | 2312894..2313253 | - | 360 | WP_012565075.1 | hypothetical protein | - |
| EL192_RS11050 () | 2313436..2314365 | - | 930 | WP_001314678.1 | hypothetical protein | - |
| EL192_RS11055 () | 2314392..2314784 | - | 393 | WP_000673077.1 | hypothetical protein | - |
| EL192_RS11060 () | 2314781..2315161 | - | 381 | WP_001029819.1 | hypothetical protein | - |
| EL192_RS11065 () | 2315162..2315545 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| EL192_RS11070 () | 2315545..2315940 | - | 396 | WP_000634214.1 | hypothetical protein | - |
| EL192_RS21665 () | 2315944..2316120 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| EL192_RS11075 () | 2316163..2317302 | - | 1140 | WP_000918487.1 | hypothetical protein | - |
| EL192_RS11080 () | 2317401..2318165 | - | 765 | WP_000770042.1 | hypothetical protein | - |
| EL192_RS11085 () | 2318270..2319382 | - | 1113 | WP_024214574.1 | hypothetical protein | - |
| EL192_RS11090 () | 2319366..2320772 | - | 1407 | WP_000763705.1 | DUF4055 domain-containing protein | - |
| EL192_RS11095 () | 2320775..2322076 | - | 1302 | WP_000625349.1 | terminase family protein | - |
| EL192_RS11100 () | 2322057..2323151 | - | 1095 | WP_000089437.1 | terminase small subunit | - |
| EL192_RS11105 () | 2323155..2323406 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| EL192_RS11110 () | 2323342..2324274 | - | 933 | WP_001204035.1 | hypothetical protein | - |
| EL192_RS11115 () | 2324267..2325058 | - | 792 | WP_016232661.1 | ParB/Srx family N-terminal domain-containing protein | - |
| EL192_RS11120 () | 2325196..2326653 | - | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| EL192_RS11125 () | 2326850..2327035 | - | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| EL192_RS11130 () | 2327252..2327749 | - | 498 | WP_001135310.1 | lysozyme RrrD | - |
| EL192_RS11135 () | 2327749..2327964 | - | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| EL192_RS11140 () | 2328216..2328590 | - | 375 | WP_001348108.1 | hypothetical protein | - |
| EL192_RS11145 () | 2328762..2329190 | - | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| EL192_RS11150 () | 2330235..2330777 | - | 543 | WP_000640161.1 | DUF1133 family protein | - |
| EL192_RS11155 () | 2330774..2331064 | - | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| EL192_RS11160 () | 2331064..2331663 | - | 600 | WP_000940319.1 | DUF1367 family protein | - |
| EL192_RS11170 () | 2332129..2332284 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 2332296..2332354 | + | 59 | - | - | Antitoxin Detail |
| EL192_RS11185 () | 2332861..2333769 | + | 909 | WP_001297700.1 | bacteriophage abortive infection AbiH family protein | - |
| EL192_RS11190 () | 2333859..2335250 | + | 1392 | WP_000982358.1 | hypothetical protein | - |
| EL192_RS11195 () | 2335513..2335935 | - | 423 | WP_016247241.1 | DUF977 family protein | - |
| EL192_RS11200 () | 2335976..2337046 | - | 1071 | WP_001262357.1 | hypothetical protein | - |
| EL192_RS11205 () | 2337118..2337543 | - | 426 | WP_000693853.1 | Rha family transcriptional regulator | - |
| EL192_RS11210 () | 2337540..2337794 | - | 255 | WP_001072337.1 | hypothetical protein | - |
| EL192_RS11215 () | 2337874..2338293 | + | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| EL192_RS11230 () | 2338725..2338880 | + | 156 | WP_016262042.1 | DUF1391 family protein | - |
| EL192_RS11235 () | 2338877..2339365 | - | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| EL192_RS11240 () | 2339807..2340028 | + | 222 | WP_000560223.1 | killing protein KilR | - |
| EL192_RS11245 () | 2340028..2340198 | + | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| EL192_RS11250 () | 2340273..2340548 | + | 276 | WP_000632297.1 | protein RacC | - |
| EL192_RS11255 () | 2340650..2343250 | + | 2601 | WP_000105139.1 | exodeoxyribonuclease VIII | - |
| EL192_RS11260 () | 2343243..2344052 | + | 810 | WP_000166319.1 | recombination protein RecT | - |
| EL192_RS11265 () | 2344109..2344303 | + | 195 | WP_050491434.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| EL192_RS11270 () | 2344296..2344505 | + | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2344302..2344480 | - | 179 | NuclAT_0 | - | - |
| - () | 2344302..2344480 | - | 179 | NuclAT_0 | - | - |
| - () | 2344302..2344480 | - | 179 | NuclAT_0 | - | - |
| - () | 2344302..2344480 | - | 179 | NuclAT_0 | - | - |
| EL192_RS11275 () | 2344584..2344799 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| EL192_RS11280 () | 2344801..2346036 | + | 1236 | WP_000040852.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL192_RS11285 () | 2346088..2347023 | + | 936 | WP_016242657.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EL192_RS11290 () | 2347118..2348491 | - | 1374 | WP_000123768.1 | ATP-dependent RNA helicase DbpA | - |
| EL192_RS11295 () | 2348969..2349952 | - | 984 | WP_000452014.1 | zinc transporter ZntB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|