MGE detailed information
MGE type: Prophage MGE length: 57289 bp
Accession: NZ_LR134335 Location: 359..57647 Organism: Yersinia enterocolitica subsp. palearctica strain NCTC13769 Replicon: chromosome
Accession: NZ_LR134335 Location: 359..57647 Organism: Yersinia enterocolitica subsp. palearctica strain NCTC13769 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL202_RS00005 () | 359..778 | - | 420 | WP_129546904.1 | phage virion morphogenesis protein | - |
| EL202_RS00010 () | 804..1258 | - | 455 | Protein_1 | phage tail protein | - |
| EL202_RS00020 () | 1354..1769 | - | 416 | Protein_2 | LysB family phage lysis regulatory protein | - |
| EL202_RS00025 () | 1771..2278 | - | 508 | Protein_3 | lysozyme | - |
| EL202_RS00030 () | 2262..2472 | - | 211 | Protein_4 | hypothetical protein | - |
| EL202_RS00035 () | 2475..2679 | - | 205 | Protein_5 | tail protein X | - |
| EL202_RS00040 () | 2679..3152 | - | 474 | WP_014609018.1 | head completion/stabilization protein | - |
| EL202_RS00045 () | 3252..3912 | - | 661 | Protein_7 | terminase endonuclease subunit | - |
| EL202_RS00050 () | 3916..5067 | - | 1152 | WP_014609016.1 | phage major capsid protein, P2 family | - |
| EL202_RS00055 () | 5144..5998 | - | 855 | WP_014609015.1 | GPO family capsid scaffolding protein | - |
| EL202_RS00060 () | 6152..7924 | + | 1773 | WP_014609014.1 | terminase ATPase subunit family protein | - |
| EL202_RS00065 () | 7921..8685 | + | 765 | WP_014609013.1 | terminase family protein | - |
| EL202_RS00070 () | 8682..9719 | + | 1038 | WP_014609181.1 | phage portal protein | - |
| EL202_RS00075 () | 9832..10110 | + | 279 | WP_014609011.1 | hypothetical protein | - |
| EL202_RS00080 () | 10475..10657 | - | 183 | WP_005163733.1 | hypothetical protein | - |
| EL202_RS00085 () | 10865..11224 | - | 360 | WP_005163732.1 | hypothetical protein | - |
| EL202_RS00090 () | 11247..13529 | - | 2283 | WP_014609010.1 | replication endonuclease | - |
| EL202_RS00095 () | 13516..13788 | - | 273 | WP_014609009.1 | DUF2732 family protein | - |
| EL202_RS00100 () | 13854..14165 | - | 312 | WP_014609008.1 | hypothetical protein | - |
| EL202_RS00105 () | 14177..14362 | - | 186 | WP_014609007.1 | DUF2724 domain-containing protein | - |
| EL202_RS00110 () | 14372..14881 | - | 510 | WP_014609006.1 | phage regulatory CII family protein | - |
| EL202_RS00115 () | 14936..15133 | - | 198 | WP_014609005.1 | hypothetical protein | - |
| EL202_RS00120 () | 15204..15815 | + | 612 | WP_016266213.1 | phage repressor protein CI | - |
| EL202_RS00125 () | 15856..16740 | + | 885 | WP_014609003.1 | BRCT domain-containing protein | - |
| EL202_RS00130 () | 17039..18064 | + | 1026 | WP_014609001.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL202_RS00135 () | 18079..19065 | + | 987 | WP_014609000.1 | DUF4917 family protein | - |
| EL202_RS00140 () | 19369..20376 | - | 1008 | WP_023161047.1 | hypothetical protein ; Integrase | Integrase |
| EL202_RS00145 () | 20357..21118 | + | 762 | Protein_27 | IS21 family transposase ISYen2A | Transposase |
| EL202_RS00150 () | 21158..22360 | - | 1203 | WP_005179233.1 | IS256 family transposase ISSod4 | Transposase |
| EL202_RS00155 () | 22410..23165 | + | 756 | Protein_29 | IS21 family transposase ISYen2B | Transposase |
| EL202_RS00160 () | 23152..23877 | + | 726 | WP_014608996.1 | IS21 family transposase ISYen2A | Transposase |
| EL202_RS00165 () | 24110..24248 | - | 139 | Protein_31 | ash family protein | - |
| EL202_RS00170 () | 24540..25424 | - | 885 | WP_072077259.1 | ISNCY family transposase ISRor2 | VF |
| EL202_RS21450 () | 25630..25806 | - | 177 | WP_005161476.1 | hypothetical protein | VF |
| EL202_RS00175 () | 26248..26568 | - | 321 | WP_005161473.1 | hypothetical protein | - |
| EL202_RS00180 () | 26558..26764 | - | 207 | WP_005161471.1 | hypothetical protein | - |
| EL202_RS00185 () | 26906..27073 | + | 168 | WP_005161469.1 | hypothetical protein | - |
| EL202_RS00190 () | 27145..27405 | + | 261 | WP_005161466.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| EL202_RS00195 () | 27412..27690 | + | 279 | WP_005161463.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| EL202_RS00200 () | 27743..28355 | - | 613 | Protein_39 | tail fiber assembly protein | - |
| EL202_RS00205 () | 28355..29647 | - | 1293 | WP_014608992.1 | phage tail protein | - |
| EL202_RS21455 () | 29620..29901 | - | 282 | WP_005161459.1 | phage tail protein | - |
| EL202_RS00210 () | 29898..30440 | - | 543 | WP_005161456.1 | phage tail protein I | - |
| EL202_RS00215 () | 30433..31341 | - | 909 | WP_005178623.1 | baseplate assembly protein | - |
| EL202_RS00220 () | 31341..31697 | - | 357 | WP_005161449.1 | GPW/gp25 family protein | - |
| EL202_RS00225 () | 31694..32329 | - | 636 | WP_005161446.1 | phage baseplate assembly protein V | - |
| EL202_RS00230 () | 32466..32738 | + | 273 | WP_005161438.1 | BrnT family toxin | - |
| EL202_RS00235 () | 32719..33009 | + | 291 | WP_005161435.1 | BrnA antitoxin family protein | - |
| EL202_RS00240 () | 33075..34136 | + | 1062 | WP_005161434.1 | toll/interleukin-1 receptor domain-containing protein | - |
| EL202_RS00245 () | 34175..34621 | - | 447 | WP_005161432.1 | phage virion morphogenesis protein | - |
| EL202_RS00250 () | 34618..35085 | - | 468 | WP_005161429.1 | phage tail protein | - |
| EL202_RS00255 () | 35187..35612 | - | 426 | WP_005161423.1 | Rz-like lysis system protein LysB | - |
| EL202_RS00260 () | 35616..36011 | - | 396 | WP_005161419.1 | M15 family metallopeptidase | - |
| EL202_RS00265 () | 35998..36177 | - | 180 | WP_005161416.1 | holin | - |
| EL202_RS00270 () | 36171..36473 | - | 303 | WP_071598556.1 | P2 family phage major capsid protein | - |
| EL202_RS00275 () | 36452..37115 | - | 664 | Protein_55 | IS3 family transposase IS1400 | Transposase |
| EL202_RS00280 () | 37302..37401 | - | 100 | Protein_56 | integrase | - |
| EL202_RS00285 () | 37400..38608 | - | 1209 | WP_005161400.1 | MFS transporter | - |
| EL202_RS00290 () | 38711..39628 | + | 918 | WP_005161398.1 | LysR family transcriptional regulator | - |
| EL202_RS00295 () | 40234..40653 | - | 420 | WP_005161396.1 | helix-turn-helix domain-containing protein | - |
| EL202_RS00300 () | 41054..41698 | + | 645 | WP_005161394.1 | Chloramphenicol acetyltransferase | VF |
| EL202_RS00315 () | 42448..42864 | + | 417 | WP_005161376.1 | antitermination protein Q | - |
| EL202_RS00320 () | 43041..43217 | - | 177 | WP_005161372.1 | GhoT/OrtT family toxin | - |
| EL202_RS00325 () | 43444..43620 | + | 177 | WP_005161370.1 | phage holin family protein | - |
| EL202_RS00330 () | 43622..44104 | + | 483 | WP_005161366.1 | lysozyme | - |
| EL202_RS00335 () | 44477..45361 | + | 885 | WP_005161363.1 | triacylglycerol lipase | - |
| EL202_RS00340 () | 45663..46319 | + | 657 | WP_005161358.1 | DUF533 domain-containing protein | - |
| EL202_RS00345 () | 46426..47310 | - | 885 | WP_005161355.1 | LysR family transcriptional regulator AmpR | - |
| EL202_RS00350 () | 47445..48611 | + | 1167 | WP_005161352.1 | class C beta-lactamase | - |
| EL202_RS00355 () | 48758..49849 | - | 1092 | WP_005161349.1 | Ribosome-binding ATPase YchF | VF |
| EL202_RS00360 () | 50117..50575 | + | 459 | WP_005161346.1 | hypothetical protein | - |
| EL202_RS00365 () | 50630..51223 | - | 594 | WP_005161343.1 | aminoacyl-tRNA hydrolase | - |
| EL202_RS00370 () | 51555..51827 | + | 273 | WP_005161340.1 | stress-induced protein YchH | - |
| EL202_RS00380 () | 52314..53261 | - | 948 | WP_004390739.1 | ribose-phosphate diphosphokinase | - |
| EL202_RS00385 () | 53459..54340 | - | 882 | WP_005161332.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
| EL202_RS00390 () | 54342..54965 | - | 624 | WP_005161329.1 | lipoprotein insertase outer membrane protein LolB | - |
| EL202_RS00395 () | 55271..56533 | + | 1263 | WP_005161325.1 | glutamyl-tRNA reductase | - |
| EL202_RS00400 () | 56565..57647 | + | 1083 | WP_005161322.1 | peptide chain release factor 1 | - |
| EL202_RS00405 () | 57647..58501 | + | 855 | WP_005161319.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| EL202_RS00410 () | 58519..58920 | + | 402 | WP_005161317.1 | SirB2 family protein | - |
| EL202_RS00415 () | 58917..59726 | + | 810 | WP_005161315.1 | invasion regulator SirB1 | - |
| EL202_RS00420 () | 59871..60725 | + | 855 | WP_005161312.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| EL202_RS00425 () | 60799..62499 | - | 1701 | WP_005161310.1 | C4-dicarboxylic acid transporter DauA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|