MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 138500 bp
Accession: NZ_LR134300 Location: 3471634..3610133 Organism: Pseudomonas fluorescens strain NCTC10783 Replicon: chromosome
Accession: NZ_LR134300 Location: 3471634..3610133 Organism: Pseudomonas fluorescens strain NCTC10783 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL286_RS16605 () | 3467122..3467733 | - | 612 | WP_126450661.1 | type 1 fimbrial protein | - |
| EL286_RS16610 () | 3468177..3468554 | - | 378 | WP_003117019.1 | Hpt domain-containing protein | - |
| EL286_RS16615 () | 3469139..3469777 | + | 639 | WP_003120654.1 | NUDIX hydrolase | - |
| EL286_RS16620 () | 3470162..3470722 | + | 561 | WP_003117022.1 | hypothetical protein | - |
| EL286_RS16625 () | 3470843..3471247 | - | 405 | WP_003112559.1 | acyl-CoA thioesterase | - |
| EL286_RS16635 () | 3471771..3472631 | + | 861 | WP_003158180.1 | ParA family protein | - |
| EL286_RS16640 () | 3472633..3473358 | + | 726 | WP_003103853.1 | hypothetical protein | - |
| EL286_RS16645 () | 3473355..3473852 | + | 498 | WP_003103852.1 | hypothetical protein | - |
| EL286_RS16650 () | 3473858..3474604 | + | 747 | WP_003159720.1 | hypothetical protein | - |
| EL286_RS16655 () | 3474601..3475287 | + | 687 | WP_003159719.1 | Lar family restriction alleviation protein | - |
| EL286_RS16660 () | 3475287..3475988 | + | 702 | WP_003103849.1 | DUF2786 domain-containing protein | - |
| EL286_RS16665 () | 3475985..3476693 | + | 709 | Protein_3211 | HNH endonuclease | - |
| EL286_RS16670 () | 3476677..3476895 | + | 219 | WP_003103847.1 | hypothetical protein | - |
| EL286_RS16675 () | 3476892..3478235 | + | 1344 | WP_003103846.1 | replicative DNA helicase | - |
| EL286_RS32820 () | 3478674..3479120 | - | 447 | WP_016561619.1 | hypothetical protein | - |
| EL286_RS16685 () | 3479298..3479483 | + | 186 | WP_003103845.1 | hypothetical protein | - |
| EL286_RS16690 () | 3479473..3480000 | + | 528 | WP_003103844.1 | hypothetical protein | - |
| EL286_RS16695 () | 3479997..3480254 | + | 258 | WP_003103843.1 | hypothetical protein | - |
| EL286_RS16700 () | 3480247..3480744 | + | 498 | WP_003125258.1 | hypothetical protein | - |
| EL286_RS16705 () | 3480737..3480970 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| EL286_RS16710 () | 3480970..3481986 | + | 1017 | WP_003158179.1 | nucleoid-associated protein YejK | - |
| EL286_RS16715 () | 3481989..3482237 | + | 249 | WP_003111972.1 | Arc family DNA-binding protein | - |
| EL286_RS16720 () | 3482234..3483967 | + | 1734 | WP_003158178.1 | ParB family protein | - |
| EL286_RS16725 () | 3483995..3484750 | + | 756 | WP_003125263.1 | DUF2857 domain-containing protein | - |
| EL286_RS16730 () | 3484753..3486078 | + | 1326 | WP_071534719.1 | hypothetical protein | - |
| EL286_RS16745 () | 3487048..3487245 | + | 198 | WP_003105756.1 | hypothetical protein | - |
| EL286_RS16750 () | 3487401..3488129 | + | 729 | WP_003105754.1 | TIGR03761 family integrating conjugative element protein | - |
| EL286_RS16755 () | 3488135..3488683 | + | 549 | WP_003105753.1 | DUF3158 family protein | - |
| EL286_RS16760 () | 3488730..3489569 | + | 840 | WP_126450664.1 | Rha family transcriptional regulator | - |
| EL286_RS16765 () | 3489599..3490087 | + | 489 | WP_003105748.1 | single-stranded DNA-binding protein | - |
| EL286_RS16770 () | 3490195..3490440 | + | 246 | WP_023102333.1 | CrpP family protein | - |
| EL286_RS16775 () | 3490506..3490724 | - | 219 | WP_003105747.1 | hypothetical protein | - |
| EL286_RS16785 () | 3490924..3491184 | - | 261 | WP_003105742.1 | hypothetical protein | - |
| EL286_RS16790 () | 3491206..3491616 | - | 411 | WP_003105740.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| EL286_RS16795 () | 3491616..3491846 | - | 231 | WP_003158175.1 | antitoxin | Antitoxin Detail |
| EL286_RS16800 () | 3492102..3494021 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| EL286_RS16805 () | 3494329..3494538 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| EL286_RS16810 () | 3494759..3496648 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| EL286_RS16815 () | 3496645..3498618 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| EL286_RS16820 () | 3498740..3499522 | + | 783 | WP_015060166.1 | phage Gp37/Gp68 family protein | - |
| EL286_RS16825 () | 3499555..3500808 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| EL286_RS16830 () | 3500874..3502235 | + | 1362 | WP_033867425.1 | IS1182 family transposase ISAzo1 | Transposase |
| EL286_RS16835 () | 3502588..3503712 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| EL286_RS16840 () | 3503712..3505421 | + | 1710 | WP_003099757.1 | hypothetical protein | VF |
| EL286_RS16845 () | 3505425..3506750 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| EL286_RS16850 () | 3506740..3507273 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| EL286_RS16855 () | 3507282..3508862 | + | 1581 | WP_015060168.1 | hypothetical protein | VF |
| EL286_RS16860 () | 3508862..3509941 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| EL286_RS16865 () | 3509963..3510493 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| EL286_RS16870 () | 3510490..3511431 | + | 942 | WP_003109361.1 | Flp pilus assembly complex ATPase component TadA | - |
| EL286_RS16875 () | 3511436..3512764 | + | 1329 | WP_003109362.1 | hypothetical protein | VF |
| EL286_RS16880 () | 3512793..3513230 | + | 438 | WP_003109363.1 | hypothetical protein | VF |
| EL286_RS16890 () | 3514152..3514541 | + | 390 | WP_003109365.1 | hypothetical protein | - |
| EL286_RS16895 () | 3514614..3514793 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| EL286_RS16900 () | 3515253..3515732 | + | 480 | WP_003109367.1 | DUF3577 domain-containing protein | - |
| EL286_RS32825 () | 3515870..3516028 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| EL286_RS16905 () | 3516102..3516299 | + | 198 | WP_003109369.1 | hypothetical protein | - |
| EL286_RS16915 () | 3516785..3517492 | + | 708 | WP_003456317.1 | hypothetical protein | - |
| EL286_RS16920 () | 3517728..3518078 | + | 351 | WP_003109371.1 | hypothetical protein | - |
| EL286_RS16925 () | 3518135..3518926 | + | 792 | WP_003109372.1 | DUF3275 family protein | - |
| EL286_RS16930 () | 3519029..3519391 | + | 363 | WP_003159706.1 | hypothetical protein | - |
| EL286_RS16935 () | 3519459..3519713 | + | 255 | WP_003125295.1 | hypothetical protein | - |
| EL286_RS16940 () | 3519805..3520410 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| EL286_RS16945 () | 3520440..3521885 | + | 1446 | WP_003125297.1 | class I SAM-dependent methyltransferase | - |
| EL286_RS16950 () | 3521990..3524239 | + | 2250 | WP_003159705.1 | DEAD/DEAH box helicase | - |
| EL286_RS16955 () | 3524341..3524775 | - | 435 | WP_169433239.1 | hypothetical protein | - |
| EL286_RS16960 () | 3524923..3525951 | - | 1029 | Protein_3266 | DUF4113 domain-containing protein | - |
| EL286_RS16965 () | 3526339..3527763 | - | 1425 | WP_003125302.1 | UvrD-helicase domain-containing protein | - |
| EL286_RS16970 () | 3527750..3529483 | - | 1734 | WP_003125303.1 | ATP-binding protein | - |
| EL286_RS16975 () | 3529836..3531266 | - | 1431 | WP_003123750.1 | IS1182 family transposase ISPa7 | Transposase |
| EL286_RS16980 () | 3531397..3532017 | - | 621 | WP_017516693.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL286_RS16985 () | 3532228..3533055 | + | 828 | WP_003159702.1 | MaoC family dehydratase N-terminal domain-containing protein | - |
| EL286_RS16990 () | 3533079..3534242 | + | 1164 | WP_003159701.1 | acyl-CoA/acyl-ACP dehydrogenase | - |
| EL286_RS16995 () | 3534254..3535069 | + | 816 | WP_003126476.1 | CoA ester lyase | - |
| EL286_RS17000 () | 3535329..3536567 | - | 1239 | WP_003126474.1 | OprD family porin | - |
| EL286_RS17005 () | 3536859..3538055 | + | 1197 | WP_003126472.1 | acetyl-CoA C-acetyltransferase | - |
| EL286_RS17010 () | 3538064..3538933 | + | 870 | WP_003126471.1 | alpha/beta hydrolase | - |
| EL286_RS17015 () | 3539005..3539895 | + | 891 | WP_003126469.1 | MBL fold metallo-hydrolase | - |
| EL286_RS17020 () | 3540035..3540937 | + | 903 | WP_017516696.1 | HTH-type transcriptional regulator CysL | VF |
| EL286_RS17025 () | 3541065..3542117 | + | 1053 | WP_003159700.1 | cyclase family protein | - |
| EL286_RS17030 () | 3542130..3542831 | + | 702 | WP_003126464.1 | (S)-1-Phenylethanol dehydrogenase | VF |
| EL286_RS17035 () | 3543020..3543709 | + | 690 | WP_003126463.1 | 3-oxoacid CoA-transferase subunit A | - |
| EL286_RS17040 () | 3543712..3544416 | + | 705 | WP_003126462.1 | 3-oxoacid CoA-transferase subunit B | - |
| EL286_RS17045 () | 3544427..3545311 | + | 885 | WP_003126461.1 | thioesterase family protein | - |
| EL286_RS17050 () | 3545504..3546802 | + | 1299 | WP_003126460.1 | MFS transporter | - |
| EL286_RS17055 () | 3546818..3547096 | + | 279 | WP_003126459.1 | muconolactone Delta-isomerase | - |
| EL286_RS17060 () | 3547174..3548415 | + | 1242 | WP_003159699.1 | acetyl-CoA hydrolase/transferase family protein | - |
| EL286_RS17065 () | 3548631..3550061 | + | 1431 | WP_023108662.1 | IS1182 family transposase ISPmo1 | Transposase |
| EL286_RS17070 () | 3550301..3551020 | - | 720 | WP_017516605.1 | hypothetical protein | - |
| EL286_RS17075 () | 3551073..3551438 | - | 366 | WP_024765029.1 | hypothetical protein | - |
| EL286_RS17080 () | 3551573..3552256 | + | 684 | WP_023101915.1 | hypothetical protein | - |
| EL286_RS17085 () | 3552481..3554643 | - | 2163 | WP_003125304.1 | hypothetical protein ; Integrase | Integrase |
| EL286_RS17090 () | 3554640..3555659 | - | 1020 | WP_071534698.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EL286_RS17100 () | 3556108..3556323 | - | 216 | WP_003159697.1 | 4-oxalocrotonate tautomerase family protein | - |
| EL286_RS17105 () | 3556373..3557470 | - | 1098 | WP_003125305.1 | alkene reductase | - |
| EL286_RS17110 () | 3557512..3558066 | - | 555 | WP_003125306.1 | OsmC family protein | - |
| EL286_RS17115 () | 3558134..3558805 | - | 672 | WP_016561615.1 | DsbA family oxidoreductase | - |
| EL286_RS17120 () | 3558858..3559199 | - | 342 | WP_003125308.1 | carboxymuconolactone decarboxylase family protein | - |
| EL286_RS17125 () | 3559294..3559854 | - | 561 | WP_015060170.1 | hypothetical protein | VF |
| EL286_RS17130 () | 3559917..3560702 | - | 786 | WP_003125309.1 | 3-alpha-hydroxycholanate dehydrogenase (NADP(+)) | VF |
| EL286_RS17135 () | 3560858..3561271 | - | 414 | WP_015060171.1 | hypothetical protein | - |
| EL286_RS17140 () | 3561264..3561824 | - | 561 | WP_003125311.1 | hypothetical protein | - |
| EL286_RS17145 () | 3562396..3562668 | - | 273 | WP_003125312.1 | hypothetical protein | - |
| EL286_RS17150 () | 3562886..3563578 | + | 693 | WP_126450666.1 | methyl-accepting chemotaxis protein | - |
| EL286_RS17155 () | 3563589..3564344 | + | 756 | WP_003125319.1 | TIGR03759 family integrating conjugative element protein | - |
| EL286_RS17160 () | 3564329..3564910 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| EL286_RS17165 () | 3564907..3565407 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| EL286_RS17170 () | 3565479..3565685 | + | 207 | WP_073689213.1 | hypothetical protein | - |
| EL286_RS17175 () | 3565689..3567920 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| EL286_RS17180 () | 3567920..3568666 | + | 747 | WP_003159693.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| EL286_RS17185 () | 3568677..3570158 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| EL286_RS32830 () | 3570290..3571399 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| EL286_RS17195 () | 3571444..3571755 | - | 312 | WP_003109392.1 | DUF2845 domain-containing protein | - |
| EL286_RS17200 () | 3571928..3572227 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| EL286_RS17205 () | 3572321..3572659 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| EL286_RS17210 () | 3572656..3572895 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| EL286_RS17215 () | 3572913..3573269 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| EL286_RS17220 () | 3573280..3573666 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| EL286_RS17225 () | 3573663..3574322 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| EL286_RS17230 () | 3574319..3575203 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| EL286_RS17235 () | 3575187..3576692 | + | 1506 | WP_003158154.1 | TIGR03752 family integrating conjugative element protein | - |
| EL286_RS17240 () | 3576670..3577113 | + | 444 | WP_003125338.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| EL286_RS17245 () | 3577113..3580055 | + | 2943 | WP_015060177.1 | conjugative transfer ATPase | - |
| EL286_RS17250 () | 3580052..3580336 | + | 285 | WP_003158152.1 | hypothetical protein | - |
| EL286_RS17255 () | 3580333..3580989 | + | 657 | WP_126450668.1 | DsbA family protein | - |
| EL286_RS17260 () | 3580986..3581204 | - | 219 | WP_003158150.1 | hypothetical protein | - |
| EL286_RS17270 () | 3581763..3582950 | + | 1188 | WP_003159689.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| EL286_RS17275 () | 3582973..3583395 | + | 423 | WP_003125089.1 | DUF1641 domain-containing protein | - |
| EL286_RS17280 () | 3583385..3584251 | + | 867 | WP_003158148.1 | methyltransferase domain-containing protein | - |
| EL286_RS17285 () | 3584389..3584820 | + | 432 | WP_003158147.1 | TIGR03757 family integrating conjugative element protein | - |
| EL286_RS17290 () | 3584820..3585758 | + | 939 | WP_003159688.1 | TIGR03756 family integrating conjugative element protein | - |
| EL286_RS17295 () | 3585776..3587158 | + | 1383 | WP_003159687.1 | integrating conjugative element protein | - |
| EL286_RS17300 () | 3587158..3587505 | + | 348 | WP_003125096.1 | hypothetical protein | - |
| EL286_RS17305 () | 3587502..3589037 | + | 1536 | WP_003158144.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| EL286_RS17310 () | 3589067..3589420 | - | 354 | WP_003158143.1 | hypothetical protein | - |
| EL286_RS17315 () | 3589539..3589811 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| EL286_RS17320 () | 3589815..3590165 | + | 351 | WP_003125102.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EL286_RS17325 () | 3590543..3599057 | - | 8515 | Protein_3337 | Cyclic beta-(1,2)-glucan synthase NdvB | VF |
| EL286_RS17330 () | 3599622..3599885 | + | 264 | WP_003125104.1 | hypothetical protein | - |
| EL286_RS17335 () | 3599899..3600123 | + | 225 | WP_003456722.1 | DUF1652 domain-containing protein | - |
| EL286_RS17340 () | 3600329..3601057 | + | 729 | WP_003125105.1 | Crp/Fnr family transcriptional regulator | - |
| EL286_RS17345 () | 3601128..3601490 | + | 363 | WP_003125106.1 | hypothetical protein | - |
| EL286_RS17350 () | 3601594..3602088 | + | 495 | WP_003158140.1 | hypothetical protein | - |
| EL286_RS17355 () | 3602197..3604215 | + | 2019 | WP_003125107.1 | class I SAM-dependent methyltransferase | - |
| EL286_RS17360 () | 3604371..3605564 | - | 1194 | WP_003158139.1 | fatty acid desaturase | - |
| EL286_RS32835 () | 3605952..3606308 | + | 357 | WP_015060180.1 | hypothetical protein | - |
| EL286_RS32840 () | 3606369..3606521 | - | 153 | WP_153274499.1 | hypothetical protein | - |
| EL286_RS17365 () | 3606520..3608439 | + | 1920 | WP_172616477.1 | helicase/relaxase domain-containing protein | - |
| EL286_RS17370 () | 3608436..3609719 | + | 1284 | WP_126450672.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL286_RS17380 () | 3610224..3610898 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| EL286_RS17385 () | 3610914..3611561 | - | 648 | WP_003112571.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| EL286_RS17390 () | 3611781..3612605 | - | 825 | WP_003120698.1 | tol-pal system protein YbgF | - |
| EL286_RS17395 () | 3612615..3613121 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| EL286_RS17400 () | 3613174..3614472 | - | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|