MGE detailed information
MGE type: Prophage MGE length: 23828 bp
Accession: NZ_LR134299 Location: 1964577..1988404 Organism: Pseudomonas putida strain NCTC13186 Replicon: chromosome
Accession: NZ_LR134299 Location: 1964577..1988404 Organism: Pseudomonas putida strain NCTC13186 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL224_RS09155 () | 1961597..1962292 | + | 696 | WP_010954927.1 | response regulator | - |
| EL224_RS09160 () | 1962354..1963259 | - | 906 | WP_010954926.1 | LysR family transcriptional regulator | - |
| EL224_RS09165 () | 1963350..1964573 | + | 1224 | WP_010954925.1 | FAD-dependent oxidoreductase | - |
| EL224_RS09170 () | 1964577..1967507 | - | 2931 | WP_049588229.1 | aminotransferase | - |
| EL224_RS09175 () | 1967721..1968296 | - | 576 | WP_010954922.1 | PIN domain-containing protein | Toxin Detail |
| EL224_RS09180 () | 1968293..1968760 | - | 468 | WP_049588231.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EL224_RS09185 () | 1968908..1970512 | - | 1605 | WP_010954920.1 | ABC transporter ATP-binding protein | - |
| EL224_RS09190 () | 1970514..1971533 | - | 1020 | WP_010954919.1 | ABC transporter permease | - |
| EL224_RS09195 () | 1971535..1972608 | - | 1074 | WP_010954918.1 | microcin C ABC transporter permease YejB | - |
| EL224_RS09200 () | 1972610..1974445 | - | 1836 | WP_010954917.1 | extracellular solute-binding protein | - |
| EL224_RS09205 () | 1974442..1976271 | - | 1830 | WP_010954916.1 | extracellular solute-binding protein | - |
| EL224_RS09210 () | 1976492..1977922 | - | 1431 | WP_010954915.1 | lytic transglycosylase domain-containing protein | - |
| EL224_RS09215 () | 1978023..1978802 | - | 780 | WP_010954914.1 | hydroxyacylglutathione hydrolase | - |
| EL224_RS09220 () | 1978888..1979661 | + | 774 | WP_003251461.1 | methyltransferase domain-containing protein | - |
| EL224_RS09225 () | 1979677..1980123 | + | 447 | WP_003251460.1 | ribonuclease HI | - |
| EL224_RS09230 () | 1980174..1980932 | + | 759 | WP_010954912.1 | DNA polymerase III subunit epsilon | - |
| EL224_RS09235 () | 1981060..1983309 | + | 2250 | WP_049588234.1 | lysine decarboxylase | - |
| EL224_RS09240 () | 1983293..1983511 | - | 219 | WP_010954911.1 | hypothetical protein | - |
| EL224_RS09245 () | 1983668..1984228 | + | 561 | WP_003251456.1 | class I chromate reductase ChrR | - |
| EL224_RS09250 () | 1984332..1986404 | - | 2073 | WP_010954910.1 | TonB-dependent receptor | - |
| EL224_RS09255 () | 1986625..1986873 | + | 249 | WP_003251454.1 | helix-turn-helix domain-containing protein | - |
| EL224_RS09260 () | 1986885..1987232 | + | 348 | WP_010954909.1 | head completion/stabilization protein | - |
| EL224_RS09265 () | 1987225..1987587 | + | 363 | WP_010954908.1 | hypothetical protein | - |
| EL224_RS09270 () | 1987584..1987961 | - | 378 | WP_010954907.1 | helix-turn-helix domain-containing protein | - |
| EL224_RS09275 () | 1988141..1988404 | + | 264 | WP_010954906.1 | ogr/Delta-like zinc finger family protein | - |
| EL224_RS09280 () | 1988495..1989964 | - | 1470 | WP_010954905.1 | NADH-quinone oxidoreductase subunit NuoN | - |
| EL224_RS09285 () | 1989972..1991504 | - | 1533 | WP_010954904.1 | NADH-quinone oxidoreductase subunit M | - |
| EL224_RS09290 () | 1991545..1993398 | - | 1854 | WP_010954903.1 | NADH-quinone oxidoreductase subunit L | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Pseudomonas putida KT2440 | Prophage | TA313, TA20571 | NC_002947 | 4671229..4695056 | 0 |