MGE detailed information
MGE type: Prophage MGE length: 55334 bp
Accession: NZ_LR134295 Location: 2482426..2537759 Organism: Escherichia coli strain NCTC9080 Replicon: chromosome
Accession: NZ_LR134295 Location: 2482426..2537759 Organism: Escherichia coli strain NCTC9080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL145_RS11820 () | 2479207..2480340 | + | 1134 | WP_000837924.1 | porin OmpN | - |
| EL145_RS11825 () | 2480481..2480915 | + | 435 | WP_001300461.1 | universal stress protein UspF | - |
| EL145_RS22765 () | 2481181..2481354 | - | 174 | WP_001157925.1 | hypothetical protein | - |
| EL145_RS11830 () | 2481694..2481807 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| EL145_RS11835 () | 2481876..2482109 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL145_RS11840 () | 2482426..2483016 | + | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL145_RS11845 () | 2483114..2483689 | - | 576 | WP_001351719.1 | tail fiber assembly protein | - |
| EL145_RS11850 () | 2483689..2486916 | - | 3228 | WP_126327481.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EL145_RS11855 () | 2486981..2487580 | - | 600 | WP_089519476.1 | hypothetical protein | VF |
| EL145_RS11860 () | 2487648..2491127 | - | 3480 | WP_105280097.1 | host specificity protein J | - |
| EL145_RS11865 () | 2491188..2491790 | - | 603 | WP_000090943.1 | tail assembly protein | - |
| EL145_RS11870 () | 2491727..2492470 | - | 744 | WP_001351716.1 | C40 family peptidase | - |
| EL145_RS11875 () | 2492476..2493174 | - | 699 | WP_001152432.1 | phage minor tail protein L | - |
| EL145_RS11880 () | 2493174..2493512 | - | 339 | WP_000024051.1 | phage tail protein | - |
| EL145_RS11885 () | 2493505..2496738 | - | 3234 | WP_000840618.1 | phage tail tape measure protein | - |
| EL145_RS22985 () | 2496904..2497104 | - | 201 | WP_001755909.1 | hypothetical protein | - |
| EL145_RS11895 () | 2497212..2497571 | - | 360 | WP_012565075.1 | hypothetical protein | - |
| EL145_RS11900 () | 2497722..2498684 | - | 963 | WP_000094292.1 | hypothetical protein | - |
| EL145_RS11905 () | 2498711..2499103 | - | 393 | WP_000144678.1 | hypothetical protein | - |
| EL145_RS11910 () | 2499100..2499480 | - | 381 | WP_001029815.1 | hypothetical protein | - |
| EL145_RS11915 () | 2499481..2499864 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| EL145_RS11920 () | 2499864..2500258 | - | 395 | Protein_2320 | protein singed | - |
| EL145_RS22770 () | 2500262..2500438 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| EL145_RS11925 () | 2500481..2501620 | - | 1140 | WP_032216333.1 | coat protein | - |
| EL145_RS11930 () | 2501719..2502483 | - | 765 | WP_000770042.1 | hypothetical protein | - |
| EL145_RS11935 () | 2502588..2503700 | - | 1113 | WP_001351715.1 | hypothetical protein | - |
| EL145_RS11940 () | 2503684..2505090 | - | 1407 | WP_000763704.1 | DUF4055 domain-containing protein | - |
| EL145_RS11945 () | 2505093..2506394 | - | 1302 | WP_000625348.1 | terminase family protein | - |
| EL145_RS11950 () | 2506375..2507469 | - | 1095 | WP_089519350.1 | terminase small subunit | - |
| EL145_RS11955 () | 2507473..2507724 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| EL145_RS11960 () | 2507660..2508592 | - | 933 | WP_001204037.1 | hypothetical protein | - |
| EL145_RS11965 () | 2508585..2509376 | - | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| EL145_RS11970 () | 2509514..2510971 | - | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| EL145_RS11975 () | 2511168..2511353 | - | 186 | WP_001228688.1 | prophage lysis lipoprotein RzoD | - |
| EL145_RS11980 () | 2511570..2512067 | - | 498 | WP_001351713.1 | lysozyme RrrD | - |
| EL145_RS11985 () | 2512067..2512282 | - | 216 | WP_000839565.1 | phage lysis protein EssD | - |
| EL145_RS11990 () | 2512534..2512908 | - | 375 | WP_001348108.1 | hypothetical protein | - |
| EL145_RS11995 () | 2513080..2513508 | - | 429 | WP_000506936.1 | cell envelope integrity protein TolA | - |
| EL145_RS12000 () | 2514553..2515095 | - | 543 | WP_000640161.1 | DUF1133 family protein | - |
| EL145_RS12005 () | 2515092..2515382 | - | 291 | WP_000247763.1 | DUF1364 domain-containing protein | - |
| EL145_RS12010 () | 2515382..2515981 | - | 600 | WP_025670565.1 | DUF1367 family protein | - |
| EL145_RS12020 () | 2516450..2516605 | - | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| EL145_RS12025 () | 2516677..2516964 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL145_RS12030 () | 2516964..2517203 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL145_RS12035 () | 2517228..2517533 | + | 306 | WP_071600497.1 | hypothetical protein | - |
| EL145_RS12040 () | 2517736..2518068 | + | 333 | WP_001349760.1 | FlxA-like family protein | - |
| EL145_RS12045 () | 2518505..2519845 | - | 1341 | WP_000589013.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL145_RS12060 () | 2520642..2521841 | + | 1200 | WP_001117227.1 | MFS transporter | - |
| EL145_RS12065 () | 2521853..2522545 | + | 693 | WP_000957772.1 | gamma-glutamylcyclotransferase | - |
| EL145_RS12070 () | 2522542..2523423 | + | 882 | WP_000019009.1 | LysR family transcriptional regulator | - |
| EL145_RS12075 () | 2523554..2524831 | - | 1278 | WP_000625667.1 | DUF2254 domain-containing protein | - |
| EL145_RS12085 () | 2524895..2526892 | - | 1998 | WP_001676522.1 | choline BCCT transporter BetT | - |
| EL145_RS12090 () | 2527233..2527655 | - | 423 | WP_001151151.1 | DUF977 family protein | - |
| EL145_RS12095 () | 2527696..2528766 | - | 1071 | WP_001262352.1 | hypothetical protein | - |
| EL145_RS12100 () | 2528838..2529263 | - | 426 | WP_000693836.1 | Rha family transcriptional regulator | - |
| EL145_RS12105 () | 2529247..2529528 | - | 282 | WP_000391949.1 | helix-turn-helix domain-containing protein | - |
| EL145_RS12110 () | 2529629..2530048 | + | 420 | WP_000362155.1 | hypothetical protein | - |
| EL145_RS12120 () | 2530448..2530603 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| EL145_RS12125 () | 2530600..2531088 | - | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| EL145_RS12130 () | 2531530..2531751 | + | 222 | WP_000560223.1 | killing protein KilR | - |
| EL145_RS12135 () | 2531751..2531921 | + | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| EL145_RS12140 () | 2531996..2532271 | + | 276 | WP_000632297.1 | protein RacC | - |
| EL145_RS12145 () | 2532373..2534973 | + | 2601 | WP_024232464.1 | exodeoxyribonuclease VIII | - |
| EL145_RS12150 () | 2534966..2535775 | + | 810 | WP_089519348.1 | recombination protein RecT | - |
| EL145_RS12155 () | 2535832..2536026 | + | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| EL145_RS12160 () | 2536019..2536228 | + | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2536025..2536203 | - | 179 | NuclAT_0 | - | - |
| - () | 2536025..2536203 | - | 179 | NuclAT_0 | - | - |
| - () | 2536025..2536203 | - | 179 | NuclAT_0 | - | - |
| - () | 2536025..2536203 | - | 179 | NuclAT_0 | - | - |
| EL145_RS12165 () | 2536307..2536522 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| EL145_RS12170 () | 2536524..2537759 | + | 1236 | WP_000040852.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL145_RS12175 () | 2537811..2538746 | + | 936 | WP_001157406.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EL145_RS12180 () | 2538875..2540248 | - | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| EL145_RS12185 () | 2540726..2541709 | - | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| EL145_RS22990 () | 2541723..2541770 | - | 48 | WP_211180494.1 | protein YnaN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|