MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 121858 bp
Accession: NZ_LR134294 Location: 470175..592032 Organism: Streptococcus pneumoniae strain NCTC12977 Replicon: chromosome
Accession: NZ_LR134294 Location: 470175..592032 Organism: Streptococcus pneumoniae strain NCTC12977 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL096_RS02485 () | 465192..466268 | + | 1077 | WP_000542473.1 | aspartate-semialdehyde dehydrogenase | - |
| EL096_RS02490 () | 466324..467259 | + | 936 | WP_050104772.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| EL096_RS02495 () | 467306..468679 | - | 1374 | WP_044727673.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| EL096_RS02500 () | 468815..468997 | - | 183 | WP_001117401.1 | 4-oxalocrotonate tautomerase | - |
| EL096_RS02505 () | 469121..469711 | + | 591 | WP_000068152.1 | thymidine kinase | - |
| EL096_RS02510 () | 469708..470787 | + | 1080 | WP_001028801.1 | peptide chain release factor 1 | - |
| EL096_RS02515 () | 470787..471626 | + | 840 | WP_000761917.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| EL096_RS02520 () | 471610..472212 | + | 603 | WP_000969303.1 | threonylcarbamoyl-AMP synthase | - |
| EL096_RS02525 () | 472214..472645 | + | 432 | WP_050085562.1 | GNAT family N-acetyltransferase | - |
| EL096_RS02530 () | 472707..473963 | + | 1257 | WP_016569738.1 | serine hydroxymethyltransferase | - |
| EL096_RS02535 () | 473971..474945 | + | 975 | WP_001812264.1 | nucleoid-associated protein | - |
| EL096_RS02540 () | 474945..475559 | + | 615 | WP_000476387.1 | cell wall hydrolase Pmp23 | - |
| EL096_RS02545 () | 475633..476607 | + | 975 | WP_001227766.1 | DUF1002 domain-containing protein | - |
| EL096_RS02550 () | 476681..478312 | + | 1632 | WP_050205396.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EL096_RS02555 () | 478526..478804 | + | 279 | WP_050111442.1 | hypothetical protein | - |
| EL096_RS02560 () | 479050..479268 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| EL096_RS02570 () | 479661..480686 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| EL096_RS02575 () | 480676..481683 | + | 1008 | WP_001244692.1 | Ferric enterobactin transport system permease protein FepD | VF |
| EL096_RS02580 () | 481683..482690 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| EL096_RS02585 () | 482690..483484 | + | 795 | WP_000677525.1 | Petrobactin import ATP-binding protein FpuD | VF |
| EL096_RS02590 () | 483872..484261 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| EL096_RS11420 () | 484233..484541 | + | 309 | WP_162499171.1 | hypothetical protein | - |
| EL096_RS02600 () | 485225..485386 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| EL096_RS02605 () | 485478..487161 | + | 1684 | Protein_491 | hypothetical protein ; Integrase | Integrase |
| EL096_RS02610 () | 487429..487995 | + | 567 | WP_000234988.1 | hypothetical protein | - |
| EL096_RS02615 () | 488320..488508 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| EL096_RS02620 () | 488570..489385 | + | 816 | WP_050221225.1 | ATP-grasp domain-containing protein | - |
| EL096_RS02625 () | 489385..490239 | + | 855 | WP_000900015.1 | ADP-ribosylglycohydrolase family protein | - |
| EL096_RS02630 () | 490351..491235 | + | 885 | WP_050221224.1 | diacylglycerol kinase family lipid kinase | - |
| EL096_RS02635 () | 491397..492101 | + | 705 | WP_001865184.1 | alpha amylase N-terminal ig-like domain-containing protein | - |
| EL096_RS02640 () | 492077..492532 | + | 456 | WP_001865186.1 | hypothetical protein | - |
| EL096_RS02645 () | 492977..493453 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EL096_RS02650 () | 493453..494214 | + | 762 | WP_054387416.1 | zeta toxin family protein | Toxin Detail |
| EL096_RS02655 () | 494242..495018 | + | 777 | Protein_501 | hypothetical protein | - |
| EL096_RS02660 () | 494946..495398 | + | 453 | WP_078375108.1 | hypothetical protein | - |
| EL096_RS02665 () | 496217..496576 | + | 360 | WP_000003750.1 | hypothetical protein | - |
| EL096_RS02670 () | 496586..496951 | + | 366 | WP_000263054.1 | MobC family plasmid mobilization relaxosome protein | - |
| EL096_RS02675 () | 496938..498788 | + | 1851 | WP_054387417.1 | relaxase/mobilization nuclease domain-containing protein | - |
| EL096_RS02680 () | 499044..500479 | + | 1436 | Protein_506 | transposase | - |
| EL096_RS02685 () | 500717..500851 | - | 135 | Protein_507 | transposase family protein | - |
| EL096_RS02690 () | 501172..502125 | - | 954 | WP_001155339.1 | IS30 family transposase ISSpn8 | Transposase |
| EL096_RS02695 () | 502484..503298 | - | 815 | Protein_509 | IS5 family transposase IS1515 | Transposase |
| EL096_RS02705 () | 503337..504095 | + | 759 | Protein_510 | hypothetical protein | - |
| EL096_RS02710 () | 504092..504727 | + | 636 | WP_050221261.1 | chloramphenicol acetyltransferase | - |
| EL096_RS02715 () | 504795..506432 | + | 1638 | WP_000021543.1 | methionine--tRNA ligase | - |
| EL096_RS02720 () | 506533..507300 | + | 768 | WP_001061789.1 | tyrosine-protein phosphatase | - |
| EL096_RS02725 () | 508317..509309 | + | 993 | WP_024266136.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| EL096_RS02730 () | 509311..510129 | + | 819 | WP_000164265.1 | ABC-2 family transporter protein | - |
| EL096_RS02735 () | 510131..510916 | + | 786 | WP_000760754.1 | ABC transporter permease | - |
| EL096_RS02740 () | 511295..512490 | - | 1196 | Protein_517 | IS110 family transposase | - |
| EL096_RS02745 () | 512992..513195 | + | 204 | WP_000275922.1 | helix-turn-helix transcriptional regulator | - |
| EL096_RS11425 () | 513326..513478 | + | 153 | WP_001812617.1 | hypothetical protein | - |
| EL096_RS02750 () | 513645..515438 | + | 1794 | WP_054387418.1 | hypothetical protein ; Integrase | Integrase |
| EL096_RS02755 () | 515543..516130 | + | 588 | WP_001812626.1 | Type 1 glutamine amidotransferase-like domain-containing protein | - |
| EL096_RS02760 () | 516411..516658 | + | 248 | Protein_522 | aminoglycoside phosphotransferase | - |
| EL096_RS02765 () | 516763..517092 | + | 330 | Protein_523 | IS5 family transposase IS1381A | Transposase |
| EL096_RS02770 () | 517220..518449 | + | 1230 | WP_000703353.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| EL096_RS02775 () | 518470..521166 | + | 2697 | WP_000058189.1 | phosphoenolpyruvate carboxylase | - |
| EL096_RS02780 () | 521579..522583 | + | 1005 | WP_000792163.1 | hypothetical protein | VF |
| EL096_RS02785 () | 522652..523518 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
| EL096_RS02790 () | 523515..524273 | + | 759 | WP_000125408.1 | ABC transporter ATP-binding protein | - |
| EL096_RS02795 () | 524363..526123 | + | 1761 | WP_000227891.1 | DNA primase | - |
| EL096_RS02800 () | 526126..527235 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| EL096_RS02805 () | 527249..527578 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| EL096_RS02810 () | 527693..528736 | + | 1044 | WP_000412280.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| EL096_RS02815 () | 528752..530077 | + | 1326 | WP_044792168.1 | glycosyltransferase family 4 protein | - |
| EL096_RS02820 () | 530108..530284 | + | 177 | WP_001256250.1 | PspC domain-containing protein | - |
| EL096_RS02825 () | 530343..530477 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| EL096_RS02830 () | 530541..531851 | + | 1311 | WP_054387419.1 | GTPase ObgE | - |
| EL096_RS02835 () | 531861..532019 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| EL096_RS11430 () | 533038..533112 | - | 75 | Protein_538 | UDP-galactopyranose mutase | - |
| EL096_RS02840 () | 533255..534514 | + | 1260 | WP_054387420.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EL096_RS02845 () | 534530..535081 | + | 552 | WP_001028736.1 | GNAT family N-acetyltransferase | - |
| EL096_RS02850 () | 535074..536351 | + | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| EL096_RS02855 () | 536367..537227 | + | 861 | WP_000631540.1 | methionyl aminopeptidase | - |
| EL096_RS02860 () | 537450..537560 | + | 111 | Protein_543 | IS5 family transposase ISSpn7 | Transposase |
| EL096_RS02865 () | 537606..538410 | + | 805 | WP_114880848.1 | IS5 family transposase | - |
| EL096_RS02870 () | 538602..540893 | + | 2292 | WP_000992855.1 | DNA helicase PcrA | - |
| EL096_RS02875 () | 540936..541616 | + | 681 | WP_000286922.1 | DNA repair protein RadC | - |
| EL096_RS02880 () | 541613..542302 | - | 690 | WP_000743330.1 | gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | - |
| EL096_RS02885 () | 542320..542961 | - | 642 | WP_000653403.1 | redox-sensing transcriptional repressor Rex | - |
| EL096_RS02890 () | 543044..543259 | - | 216 | WP_000462487.1 | DUF4649 family protein | - |
| EL096_RS02895 () | 543267..543614 | - | 348 | WP_000863509.1 | DUF1831 domain-containing protein | - |
| EL096_RS02900 () | 543619..544734 | - | 1116 | WP_000639664.1 | cysteine desulfurase | - |
| EL096_RS02905 () | 544744..545703 | - | 960 | WP_001283813.1 | ribose-phosphate diphosphokinase | - |
| EL096_RS02910 () | 545816..546385 | - | 570 | WP_000681293.1 | CYTH domain-containing protein | - |
| EL096_RS02915 () | 546513..547184 | + | 672 | WP_000171676.1 | GTP pyrophosphokinase family protein | - |
| EL096_RS02920 () | 547168..547986 | + | 819 | WP_000799053.1 | NAD kinase | - |
| EL096_RS02925 () | 547983..548879 | + | 897 | WP_001210004.1 | RluA family pseudouridine synthase | - |
| EL096_RS02930 () | 548923..549897 | + | 975 | WP_000451586.1 | phosphate acetyltransferase | - |
| EL096_RS02935 () | 550159..551485 | - | 1327 | Protein_558 | ISL3 family transposase | - |
| EL096_RS02940 () | 551667..551966 | - | 300 | WP_000981526.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EL096_RS02945 () | 552368..553066 | + | 699 | WP_000509041.1 | DUF1275 domain-containing protein | - |
| EL096_RS02950 () | 553254..553568 | + | 315 | WP_000109141.1 | 50S ribosomal protein L21 | - |
| EL096_RS02955 () | 553584..553928 | + | 345 | WP_000613699.1 | ribosomal-processing cysteine protease Prp | - |
| EL096_RS02960 () | 553945..554238 | + | 294 | WP_000916509.1 | 50S ribosomal protein L27 | - |
| EL096_RS02970 () | 554549..554754 | - | 206 | Protein_564 | ABC transporter substrate-binding protein | - |
| EL096_RS02975 () | 555192..556109 | + | 918 | WP_000587443.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| EL096_RS02980 () | 556202..557050 | - | 849 | WP_000592059.1 | YitT family protein | - |
| EL096_RS02985 () | 557192..558031 | + | 840 | WP_000161392.1 | DegV family protein | - |
| EL096_RS02990 () | 558138..558413 | + | 276 | WP_001284639.1 | HU family DNA-binding protein | - |
| EL096_RS02995 () | 558838..560739 | + | 1902 | WP_000584868.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| EL096_RS03000 () | 560742..561605 | + | 864 | Protein_570 | XRE/MutR family transcriptional regulator | - |
| EL096_RS03005 () | 561685..562863 | + | 1179 | WP_001083024.1 | MFS transporter | - |
| EL096_RS03010 () | 562956..564914 | + | 1959 | WP_001042597.1 | NAD-dependent DNA ligase LigA | - |
| EL096_RS03015 () | 565026..567305 | + | 2280 | WP_054387423.1 | type I pullulanase | - |
| EL096_RS03020 () | 567863..569287 | + | 1425 | WP_000199371.1 | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase | - |
| EL096_RS03025 () | 569663..571591 | + | 1929 | WP_000370242.1 | 1,4-alpha-glucan branching protein GlgB | - |
| EL096_RS03030 () | 571581..572723 | + | 1143 | WP_000787276.1 | glucose-1-phosphate adenylyltransferase | - |
| EL096_RS03035 () | 572713..573852 | + | 1140 | WP_000687070.1 | glucose-1-phosphate adenylyltransferase subunit GlgD | - |
| EL096_RS03040 () | 573849..575282 | + | 1434 | WP_054387424.1 | glycogen synthase GlgA | - |
| EL096_RS11435 () | 575341..575712 | + | 372 | WP_001808482.1 | Phosphoserine phosphatase | VF |
| EL096_RS11440 () | 575753..575986 | + | 234 | WP_161801469.1 | HAD hydrolase family protein | - |
| EL096_RS03050 () | 575995..577110 | + | 1116 | WP_000706440.1 | glycerate kinase | - |
| EL096_RS03055 () | 577107..577553 | - | 447 | WP_054387425.1 | YueI family protein | - |
| EL096_RS03060 () | 577717..579021 | + | 1305 | WP_000022815.1 | phosphopyruvate hydratase | - |
| EL096_RS03065 () | 579159..579605 | - | 447 | WP_078162495.1 | tyrosine-type recombinase/integrase | - |
| EL096_RS03070 () | 579505..579717 | - | 213 | Protein_585 | transposase | - |
| EL096_RS03075 () | 579815..580333 | - | 519 | Protein_586 | IS630 family transposase IS630-Spn1 | Transposase |
| EL096_RS03080 () | 580387..580562 | + | 176 | Protein_587 | diacylglycerol kinase family lipid kinase | - |
| EL096_RS03085 () | 580762..584037 | + | 3276 | WP_114880830.1 | ATP-dependent nuclease subunit B | - |
| EL096_RS03090 () | 584034..587684 | + | 3651 | WP_050104893.1 | helicase-exonuclease AddAB subunit AddA | - |
| EL096_RS03095 () | 587646..587813 | - | 168 | WP_001828683.1 | hypothetical protein | - |
| EL096_RS03105 () | 587944..589122 | + | 1179 | WP_000174787.1 | hypothetical protein | - |
| EL096_RS03110 () | 589331..595222 | + | 5892 | WP_054387427.1 | immunoglobulin A1 protease | - |
| EL096_RS03115 () | 595274..595477 | + | 204 | WP_078102781.1 | LPXTG cell wall anchor domain-containing protein | - |
| EL096_RS03120 () | 595644..596495 | + | 852 | WP_000201299.1 | ribosome biogenesis GTPase YlqF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|