MGE detailed information
MGE type: Prophage MGE length: 45891 bp
Accession: NZ_LR134270 Location: 2550176..2596066 Organism: Escherichia marmotae strain NCTC8196 Replicon: chromosome
Accession: NZ_LR134270 Location: 2550176..2596066 Organism: Escherichia marmotae strain NCTC8196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL146_RS12455 () | 2545853..2546197 | + | 345 | Protein_2383 | alpha/beta hydrolase | - |
| EL146_RS12460 () | 2546267..2546839 | - | 573 | WP_126511280.1 | cytolethal distending toxin type IV subunit CdtC | - |
| EL146_RS12465 () | 2546836..2547657 | - | 822 | WP_001516443.1 | cytolethal distending toxin type I nuclease subunit CdtB | - |
| EL146_RS12470 () | 2547654..2548367 | - | 714 | WP_001516444.1 | cytolethal distending toxin type IV subunit CdtA | - |
| EL146_RS12475 () | 2548880..2549170 | - | 291 | WP_001516445.1 | hypothetical protein | - |
| EL146_RS12480 () | 2549181..2549885 | - | 705 | WP_001516446.1 | tail fiber domain-containing protein | - |
| EL146_RS12485 () | 2549895..2550176 | - | 282 | WP_000654144.1 | hypothetical protein | - |
| EL146_RS12490 () | 2550176..2552551 | - | 2376 | WP_001516447.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EL146_RS12495 () | 2552616..2553215 | - | 600 | WP_001516448.1 | TVP38/TMEM64 family inner membrane protein YdjZ | VF |
| EL146_RS12500 () | 2553283..2556681 | - | 3399 | WP_001516449.1 | host specificity protein J | - |
| EL146_RS12505 () | 2556742..2557389 | - | 648 | WP_020246041.1 | tail assembly protein | - |
| EL146_RS12510 () | 2557287..2558030 | - | 744 | WP_032157513.1 | C40 family peptidase | - |
| EL146_RS12515 () | 2558036..2558734 | - | 699 | WP_001516452.1 | phage minor tail protein L | - |
| EL146_RS12520 () | 2558734..2559072 | - | 339 | WP_024191885.1 | phage tail protein | - |
| EL146_RS12525 () | 2559065..2562298 | - | 3234 | WP_001516454.1 | phage tail tape measure protein | - |
| EL146_RS12530 () | 2562462..2562662 | - | 201 | WP_032139919.1 | hypothetical protein | - |
| EL146_RS12535 () | 2562770..2563129 | - | 360 | WP_122984268.1 | hypothetical protein | - |
| EL146_RS12540 () | 2563280..2564242 | - | 963 | WP_001516456.1 | hypothetical protein | - |
| EL146_RS12545 () | 2564269..2564661 | - | 393 | WP_001526972.1 | hypothetical protein | - |
| EL146_RS12550 () | 2564658..2565038 | - | 381 | WP_024008690.1 | hypothetical protein | - |
| EL146_RS12555 () | 2565039..2565422 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| EL146_RS12560 () | 2565422..2565817 | - | 396 | WP_000634214.1 | hypothetical protein | - |
| EL146_RS23785 () | 2565821..2565997 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| EL146_RS12565 () | 2566040..2567179 | - | 1140 | WP_001526967.1 | hypothetical protein | - |
| EL146_RS12570 () | 2567278..2568042 | - | 765 | WP_000770040.1 | hypothetical protein | - |
| EL146_RS12575 () | 2568147..2569259 | - | 1113 | WP_024234576.1 | hypothetical protein | - |
| EL146_RS12580 () | 2569243..2570649 | - | 1407 | WP_024008689.1 | DUF4055 domain-containing protein | - |
| EL146_RS12585 () | 2570652..2571953 | - | 1302 | WP_105279859.1 | terminase family protein | - |
| EL146_RS12590 () | 2571934..2573028 | - | 1095 | WP_000089437.1 | terminase small subunit | - |
| EL146_RS12595 () | 2573032..2573283 | - | 252 | WP_000613571.1 | hypothetical protein | - |
| EL146_RS12600 () | 2573219..2574151 | - | 933 | WP_001204031.1 | hypothetical protein | - |
| EL146_RS12605 () | 2574144..2574935 | - | 792 | WP_001516459.1 | ParB/Srx family N-terminal domain-containing protein | - |
| EL146_RS12610 () | 2575073..2576530 | - | 1458 | WP_001097899.1 | Trk system potassium transporter TrkG | - |
| EL146_RS12615 () | 2576727..2576912 | - | 186 | WP_001228693.1 | Rz1 family lipoprotein | - |
| EL146_RS12620 () | 2577129..2577626 | - | 498 | WP_001135280.1 | lysozyme RrrD | - |
| EL146_RS12625 () | 2577626..2577841 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| EL146_RS12640 () | 2578860..2580068 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| EL146_RS12645 () | 2580457..2580993 | - | 537 | WP_000640127.1 | DUF1133 family protein | - |
| EL146_RS12650 () | 2580990..2581280 | - | 291 | WP_000228021.1 | DUF1364 domain-containing protein | - |
| EL146_RS12655 () | 2581280..2581879 | - | 600 | WP_000940322.1 | DUF1367 family protein | - |
| EL146_RS12665 () | 2582346..2582501 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| - () | 2582513..2582571 | + | 59 | - | - | Antitoxin Detail |
| EL146_RS12675 () | 2582739..2583404 | - | 666 | WP_021554705.1 | epoxyqueuosine reductase QueH | - |
| EL146_RS12680 () | 2583589..2584005 | - | 417 | WP_001151236.1 | DUF977 family protein | - |
| EL146_RS12685 () | 2584021..2584782 | - | 762 | WP_000450696.1 | DUF1627 domain-containing protein | - |
| EL146_RS12690 () | 2584805..2585551 | - | 747 | WP_000788766.1 | ATP-binding protein | - |
| EL146_RS12695 () | 2585558..2586415 | - | 858 | WP_000899759.1 | DUF1376 domain-containing protein | - |
| EL146_RS12700 () | 2586428..2586850 | - | 423 | WP_000693802.1 | hypothetical protein | - |
| EL146_RS12705 () | 2586847..2587101 | - | 255 | WP_001072342.1 | hypothetical protein | - |
| EL146_RS12710 () | 2587181..2587600 | + | 420 | WP_000233320.1 | helix-turn-helix domain-containing protein | - |
| EL146_RS12720 () | 2588034..2588189 | + | 156 | WP_001169146.1 | DUF1391 family protein | - |
| EL146_RS12725 () | 2588186..2588674 | - | 489 | WP_014639167.1 | superinfection exclusion B family protein | - |
| EL146_RS12730 () | 2589105..2589326 | + | 222 | WP_000560230.1 | killing protein KilR | - |
| EL146_RS12735 () | 2589320..2589496 | + | 177 | WP_000245522.1 | hypothetical protein | - |
| EL146_RS12740 () | 2589571..2589846 | + | 276 | WP_001516463.1 | phage protein | - |
| EL146_RS12745 () | 2589948..2592971 | + | 3024 | WP_000105115.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| EL146_RS12750 () | 2592986..2594075 | + | 1090 | Protein_2438 | recombinase RecT | - |
| EL146_RS12755 () | 2594139..2594297 | + | 159 | WP_032159401.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| EL146_RS12760 () | 2594326..2594514 | + | 189 | WP_001383994.1 | DUF1187 family protein | - |
| - () | 2594332..2594510 | - | 179 | NuclAT_0 | - | - |
| - () | 2594332..2594510 | - | 179 | NuclAT_0 | - | - |
| - () | 2594332..2594510 | - | 179 | NuclAT_0 | - | - |
| - () | 2594332..2594510 | - | 179 | NuclAT_0 | - | - |
| EL146_RS12765 () | 2594614..2594829 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| EL146_RS12770 () | 2594831..2596066 | + | 1236 | WP_001516465.1 | putative protein YisK ; Integrase | Integrase |
| EL146_RS12775 () | 2596118..2597053 | + | 936 | WP_126511282.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| EL146_RS12780 () | 2597150..2598358 | + | 1209 | WP_000343717.1 | IS256 family transposase | - |
| EL146_RS12790 () | 2598471..2599844 | - | 1374 | WP_016248741.1 | ATP-dependent RNA helicase DbpA | - |
| EL146_RS23790 () | 2599874..2600047 | - | 174 | WP_001296046.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|