MGE detailed information
MGE type: Prophage MGE length: 95514 bp
Accession: NZ_LR134270 Location: 2080108..2175621 Organism: Escherichia marmotae strain NCTC8196 Replicon: chromosome
Accession: NZ_LR134270 Location: 2080108..2175621 Organism: Escherichia marmotae strain NCTC8196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL146_RS09965 () | 2075596..2076267 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| EL146_RS09970 () | 2076427..2077797 | - | 1371 | WP_000423722.1 | adenylosuccinate lyase | - |
| EL146_RS09975 () | 2077801..2078442 | - | 642 | WP_001516208.1 | high frequency lysogenization protein HflD | - |
| EL146_RS09980 () | 2078477..2079583 | - | 1107 | WP_001516209.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| EL146_RS09985 () | 2079637..2080098 | - | 462 | WP_000476079.1 | phosphatase NudJ | - |
| EL146_RS09990 () | 2080108..2080761 | - | 654 | WP_016248604.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| EL146_RS09995 () | 2080933..2082183 | + | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| EL146_RS10000 () | 2082297..2083439 | - | 1143 | WP_000741339.1 | putative peptidoglycan glycosyltransferase FtsW ; Integrase | Integrase |
| EL146_RS10005 () | 2083429..2083665 | - | 237 | WP_000088652.1 | excisionase | - |
| EL146_RS10010 () | 2083805..2084044 | - | 240 | WP_000488406.1 | DUF4222 domain-containing protein | - |
| EL146_RS10015 () | 2084092..2084310 | - | 219 | WP_000763385.1 | TraR/DksA family transcriptional regulator | - |
| EL146_RS10020 () | 2084409..2084624 | - | 216 | WP_000188870.1 | hypothetical protein | - |
| EL146_RS10025 () | 2084701..2085258 | - | 558 | WP_000129285.1 | phage N-6-adenine-methyltransferase | - |
| EL146_RS10030 () | 2085251..2085412 | - | 162 | WP_000682294.1 | DUF1317 family protein | - |
| EL146_RS10035 () | 2085409..2086089 | - | 681 | WP_016261925.1 | YqaJ viral recombinase family protein | - |
| EL146_RS10040 () | 2086086..2086871 | - | 786 | WP_016261926.1 | phage recombination protein Bet | - |
| EL146_RS10045 () | 2086877..2087173 | - | 297 | WP_000995455.1 | host-nuclease inhibitor protein Gam | - |
| EL146_RS10055 () | 2087249..2087539 | - | 291 | WP_023148105.1 | hypothetical protein | - |
| EL146_RS10060 () | 2087936..2088313 | - | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| EL146_RS10065 () | 2088291..2089352 | - | 1062 | WP_000380252.1 | hypothetical protein | - |
| EL146_RS10070 () | 2089433..2090125 | - | 693 | WP_000712396.1 | helix-turn-helix transcriptional regulator | - |
| EL146_RS10075 () | 2090236..2090463 | + | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| EL146_RS10080 () | 2090494..2091033 | + | 540 | WP_001182878.1 | toxin YdaT domain-containing protein | - |
| EL146_RS10085 () | 2091030..2092049 | + | 1020 | WP_000147863.1 | replication protein | - |
| EL146_RS10090 () | 2092046..2092747 | + | 702 | WP_000788823.1 | hypothetical protein | - |
| EL146_RS10095 () | 2092744..2093046 | + | 303 | WP_000145915.1 | protein ren | - |
| EL146_RS10100 () | 2093114..2093446 | + | 333 | WP_001070451.1 | SMR family multidrug efflux protein EmrE | - |
| EL146_RS10105 () | 2093494..2093643 | + | 150 | WP_001299444.1 | hypothetical protein | - |
| EL146_RS10110 () | 2093701..2095227 | + | 1527 | WP_000709082.1 | hypothetical protein ; Integrase | Integrase |
| EL146_RS10115 () | 2095692..2096243 | + | 552 | WP_001445652.1 | Raf kinase inhibitor-like protein YbcL | - |
| EL146_RS10120 () | 2096253..2097050 | + | 798 | WP_000881075.1 | helix-turn-helix transcriptional regulator | - |
| EL146_RS10125 () | 2097167..2097268 | + | 102 | WP_001303586.1 | hypothetical protein | - |
| EL146_RS10130 () | 2097265..2097720 | + | 456 | WP_001054339.1 | DNA base-flipping protein YbcN | - |
| EL146_RS10135 () | 2097720..2097890 | + | 171 | WP_000224916.1 | hypothetical protein | - |
| EL146_RS10140 () | 2097883..2098173 | + | 291 | WP_000774488.1 | DUF1364 domain-containing protein | - |
| EL146_RS10145 () | 2098170..2098532 | + | 363 | WP_001099521.1 | crossover junction endodeoxyribonuclease RusA | - |
| EL146_RS10150 () | 2098529..2098669 | + | 141 | WP_000971070.1 | YlcG family protein | - |
| EL146_RS10155 () | 2098755..2099132 | + | 378 | WP_001204777.1 | antitermination protein | - |
| EL146_RS10160 () | 2099277..2100485 | - | 1209 | WP_000343717.1 | IS256 family transposase IS1414 | Transposase |
| EL146_RS10170 () | 2100611..2101135 | - | 525 | WP_000780582.1 | lipocalin family protein | - |
| EL146_RS10175 () | 2101328..2102287 | + | 960 | WP_000592547.1 | DUF523 and DUF1722 domain-containing protein | - |
| EL146_RS10185 () | 2102639..2103370 | + | 732 | WP_001146311.1 | helix-turn-helix domain-containing protein | - |
| EL146_RS10190 () | 2103559..2103774 | + | 216 | WP_000839582.1 | phage lysis protein EssD | - |
| EL146_RS10195 () | 2103774..2104271 | + | 498 | WP_001135277.1 | lysozyme RrrD | - |
| EL146_RS10200 () | 2104268..2104726 | + | 459 | WP_001082731.1 | lysis protein | - |
| EL146_RS10205 () | 2104932..2105420 | + | 489 | WP_016245257.1 | GIY-YIG nuclease family protein | - |
| EL146_RS10215 () | 2105935..2106345 | - | 411 | WP_000079508.1 | DUF1398 family protein | - |
| EL146_RS10220 () | 2106403..2106636 | - | 234 | WP_001331705.1 | YlcI/YnfO family protein | - |
| EL146_RS10225 () | 2107024..2107569 | + | 546 | WP_000867490.1 | terminase small subunit | - |
| EL146_RS10230 () | 2107544..2109469 | + | 1926 | WP_016243324.1 | phage terminase large subunit family protein | - |
| EL146_RS10235 () | 2109466..2109672 | + | 207 | WP_000198149.1 | gpW family protein | - |
| EL146_RS10240 () | 2109669..2111270 | + | 1602 | WP_072841936.1 | phage portal protein | - |
| EL146_RS10245 () | 2111251..2112582 | + | 1332 | WP_126511234.1 | S49 family peptidase | - |
| EL146_RS10250 () | 2112592..2112924 | + | 333 | WP_000201478.1 | head decoration protein | - |
| EL146_RS10255 () | 2112980..2114005 | + | 1026 | WP_000118191.1 | major capsid protein | - |
| EL146_RS10260 () | 2114047..2114442 | + | 396 | WP_000158882.1 | DNA-packaging protein FI | - |
| EL146_RS10265 () | 2114454..2114807 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| EL146_RS10270 () | 2114819..2115397 | + | 579 | WP_000975075.1 | phage tail protein | - |
| EL146_RS10275 () | 2115394..2115789 | + | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| EL146_RS10280 () | 2115797..2116537 | + | 741 | WP_024165097.1 | phage tail protein | - |
| EL146_RS10285 () | 2116553..2116975 | + | 423 | WP_000479163.1 | phage minor tail protein G | - |
| EL146_RS10290 () | 2116957..2117391 | + | 435 | WP_000459470.1 | phage tail assembly protein T | - |
| EL146_RS10295 () | 2117384..2119891 | + | 2508 | Protein_1963 | phage tail tape measure protein | - |
| EL146_RS23765 () | 2119901..2120125 | + | 225 | Protein_1964 | phage tail protein | - |
| EL146_RS10300 () | 2120125..2120823 | + | 699 | WP_001152574.1 | phage minor tail protein L | - |
| EL146_RS10305 () | 2120829..2121572 | + | 744 | WP_032141264.1 | C40 family peptidase | - |
| EL146_RS10310 () | 2121509..2122141 | + | 633 | WP_071985606.1 | tail assembly protein | - |
| EL146_RS10315 () | 2122202..2125684 | + | 3483 | WP_126511238.1 | host specificity protein J | - |
| EL146_RS10320 () | 2125743..2127764 | + | 2022 | WP_000290539.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EL146_RS10325 () | 2127761..2128039 | + | 279 | WP_000654170.1 | hypothetical protein | - |
| EL146_RS10330 () | 2128052..2128345 | + | 294 | WP_000355360.1 | hypothetical protein | - |
| EL146_RS10335 () | 2128365..2128475 | + | 111 | Protein_1972 | tail fiber assembly protein | - |
| EL146_RS10340 () | 2129022..2129771 | + | 750 | WP_000386784.1 | DNA-binding transcriptional activator AppY | - |
| EL146_RS10345 () | 2130021..2130974 | - | 954 | WP_126511240.1 | Heptaprenylglyceryl phosphate synthase | VF |
| EL146_RS10350 () | 2131525..2131677 | + | 153 | WP_000539945.1 | isocitrate dehydrogenase | - |
| EL146_RS10355 () | 2131941..2132351 | - | 411 | WP_001516236.1 | ASCH domain-containing protein | - |
| EL146_RS10360 () | 2132534..2132629 | - | 96 | WP_010380789.1 | DUF1317 family protein | - |
| EL146_RS10365 () | 2132626..2132721 | - | 96 | WP_016248621.1 | hypothetical protein | - |
| EL146_RS10370 () | 2132739..2132888 | - | 150 | WP_000035101.1 | hypothetical protein | - |
| EL146_RS10375 () | 2133084..2133416 | + | 333 | WP_001070432.1 | SMR family multidrug efflux protein EmrE | - |
| EL146_RS10380 () | 2133477..2134520 | - | 1044 | WP_001516240.1 | alpha/beta hydrolase | - |
| EL146_RS10385 () | 2134882..2135433 | + | 552 | WP_016248622.1 | kinase inhibitor | - |
| EL146_RS10390 () | 2135443..2136238 | + | 796 | Protein_1983 | helix-turn-helix transcriptional regulator | - |
| EL146_RS10395 () | 2136440..2136778 | + | 339 | Protein_1984 | antitermination protein | - |
| EL146_RS10400 () | 2137150..2137365 | + | 216 | WP_000066486.1 | cold shock-like protein CspB | - |
| EL146_RS10405 () | 2138032..2138109 | + | 78 | Protein_1986 | holin | - |
| EL146_RS10415 () | 2138523..2138891 | + | 369 | Protein_1987 | terminase small subunit | - |
| EL146_RS10420 () | 2139076..2140185 | + | 1110 | WP_001516244.1 | alkene reductase | - |
| EL146_RS10425 () | 2140186..2141097 | - | 912 | WP_016248625.1 | Protein SapB | VF |
| EL146_RS10430 () | 2141326..2141652 | + | 327 | WP_001516246.1 | EthD family reductase | - |
| EL146_RS10435 () | 2141765..2142481 | - | 717 | WP_000532916.1 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C | VF |
| EL146_RS10440 () | 2142756..2143085 | - | 330 | WP_032240664.1 | YkgJ family cysteine cluster protein | - |
| EL146_RS10450 () | 2143896..2145419 | + | 1524 | WP_126511242.1 | Glutamyl-tRNA(Gln) amidotransferase subunit A | VF |
| EL146_RS10455 () | 2145590..2145808 | + | 219 | WP_001065870.1 | hypothetical protein | - |
| EL146_RS10460 () | 2146116..2146451 | - | 336 | WP_186334792.1 | YmgD family protein | - |
| EL146_RS10465 () | 2146455..2146799 | - | 345 | WP_000726984.1 | glycine zipper family protein | - |
| EL146_RS10470 () | 2147250..2147516 | - | 267 | WP_001185664.1 | cell division topological specificity factor MinE | - |
| EL146_RS10475 () | 2147520..2148332 | - | 813 | WP_000101053.1 | HTH-type transcriptional repressor KstR2 | VF |
| EL146_RS10480 () | 2148356..2149051 | - | 696 | WP_001516251.1 | septum site-determining protein MinC | - |
| EL146_RS10485 () | 2149180..2149473 | + | 294 | WP_001516252.1 | YcgL domain-containing protein | - |
| EL146_RS10490 () | 2149545..2150204 | + | 660 | WP_126511244.1 | fumarylacetoacetate hydrolase family protein | - |
| EL146_RS10495 () | 2150296..2150742 | + | 447 | WP_001516253.1 | YcgN family cysteine cluster protein | - |
| EL146_RS10500 () | 2151580..2152365 | - | 786 | WP_000571466.1 | 23S rRNA (uracil-C(5))-methyltransferase RlmCD | VF |
| EL146_RS10505 () | 2152362..2153117 | - | 756 | WP_001516255.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| EL146_RS10510 () | 2153196..2154128 | + | 933 | WP_010376204.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| EL146_RS10515 () | 2154144..2155466 | + | 1323 | WP_001184055.1 | murein DD-endopeptidase MepM | - |
| EL146_RS10520 () | 2155585..2156556 | + | 972 | WP_001516257.1 | Transcription antiterminator LicT | VF |
| EL146_RS10525 () | 2156711..2158153 | - | 1443 | WP_000091161.1 | pyruvate kinase | - |
| EL146_RS10530 () | 2158280..2159149 | - | 870 | WP_001056699.1 | DNA-binding transcriptional regulator HexR | - |
| EL146_RS23660 () | 2159172..2159471 | + | 300 | WP_000155615.1 | hypothetical protein | - |
| EL146_RS10535 () | 2159487..2160962 | + | 1476 | WP_000301721.1 | glucose-6-phosphate dehydrogenase | - |
| EL146_RS10540 () | 2161197..2163008 | + | 1812 | WP_001516259.1 | phosphogluconate dehydratase | - |
| EL146_RS10545 () | 2163046..2163687 | + | 642 | WP_000800529.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EL146_RS10550 () | 2163743..2164921 | - | 1179 | WP_016248627.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EL146_RS10555 () | 2165063..2165353 | + | 291 | WP_016248628.1 | DNA damage-inducible protein YebG | - |
| EL146_RS10560 () | 2165420..2165776 | + | 357 | WP_016248629.1 | protein YebF | - |
| EL146_RS10565 () | 2166083..2166742 | + | 660 | WP_016248630.1 | tellurite resistance TerB family protein | - |
| EL146_RS10570 () | 2166951..2169011 | + | 2061 | WP_016248631.1 | oligopeptidase B | - |
| EL146_RS10575 () | 2169008..2169670 | - | 663 | WP_000944296.1 | exodeoxyribonuclease X | - |
| EL146_RS10580 () | 2169695..2170351 | - | 657 | WP_000122137.1 | carbon-nitrogen hydrolase family protein | - |
| EL146_RS10585 () | 2170452..2170682 | - | 231 | WP_000916764.1 | DNA polymerase III subunit theta | - |
| EL146_RS10590 () | 2170821..2171195 | + | 375 | WP_016248632.1 | CopC domain-containing protein YobA | - |
| EL146_RS10595 () | 2171199..2172071 | + | 873 | WP_000879335.1 | copper homeostasis membrane protein CopD | - |
| EL146_RS10600 () | 2172084..2172425 | + | 342 | WP_000976465.1 | YebY family protein | - |
| - () | 2172455..2172700 | - | 246 | - | - | Antitoxin Detail |
| - () | 2172583..2172686 | + | 104 | - | - | Toxin Detail |
| EL146_RS10605 () | 2172835..2173491 | + | 657 | WP_000806226.1 | protein-serine/threonine phosphatase | - |
| EL146_RS10610 () | 2173492..2173683 | - | 192 | WP_001516263.1 | YebW family protein | - |
| EL146_RS10615 () | 2173788..2174024 | - | 237 | WP_001516264.1 | DUF1480 family protein | - |
| EL146_RS10620 () | 2174140..2175579 | - | 1440 | WP_024193571.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EL146_RS10625 () | 2175659..2178292 | - | 2634 | WP_000076949.1 | lipid-binding membrane homeostasis protein YebT | - |
| EL146_RS10630 () | 2178261..2179544 | - | 1284 | WP_016248634.1 | membrane integrity lipid transport subunit YebS | - |
| EL146_RS10635 () | 2179674..2180171 | + | 498 | WP_024193572.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|