MGE detailed information
MGE type: Genomic_island MGE length: 8794 bp
Accession: NZ_LR134248 Location: 4108046..4116839 Organism: Escherichia coli strain NCTC10537 Replicon: chromosome
Accession: NZ_LR134248 Location: 4108046..4116839 Organism: Escherichia coli strain NCTC10537 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL141_RS20010 () | 4104065..4104403 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| EL141_RS20015 () | 4104379..4106076 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| EL141_RS20020 () | 4106113..4106688 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| EL141_RS20030 () | 4107487..4109026 | + | 1540 | Protein_3895 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EL141_RS20040 () | 4109392..4110726 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| EL141_RS20045 () | 4110806..4112953 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| EL141_RS20050 () | 4113012..4114469 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| EL141_RS20055 () | 4114706..4116223 | + | 1518 | WP_001295090.1 | lysine--tRNA ligase | - |
| EL141_RS20060 () | 4116342..4116515 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EL141_RS20065 () | 4116543..4116839 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EL141_RS20070 () | 4117066..4117338 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| EL141_RS20075 () | 4117350..4117580 | - | 231 | WP_001070602.1 | (4Fe-4S)-binding protein | - |
| EL141_RS20080 () | 4117761..4119397 | + | 1637 | Protein_3904 | sensor histidine kinase | - |
| EL141_RS20085 () | 4119394..4120113 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.005 |