MGE detailed information
MGE type: Prophage MGE length: 45129 bp
Accession: NZ_LR134248 Location: 3924595..3969723 Organism: Escherichia coli strain NCTC10537 Replicon: chromosome
Accession: NZ_LR134248 Location: 3924595..3969723 Organism: Escherichia coli strain NCTC10537 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL141_RS19075 () | 3922199..3922924 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| EL141_RS19080 () | 3922961..3923500 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| EL141_RS19085 () | 3923565..3924113 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| EL141_RS19090 () | 3924595..3925191 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| EL141_RS22450 () | 3925669..3925803 | - | 135 | Protein_3713 | integrase | - |
| EL141_RS19095 () | 3925859..3926556 | + | 698 | Protein_3714 | IS1 family transposase IS1A | Transposase |
| EL141_RS19100 () | 3926565..3927047 | - | 483 | Protein_3715 | Tyrosine recombinase XerC | VF |
| EL141_RS19105 () | 3928503..3929219 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EL141_RS19110 () | 3929239..3930345 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| EL141_RS19115 () | 3930410..3931390 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EL141_RS19120 () | 3931973..3933213 | - | 1241 | Protein_3719 | helicase YjhR | - |
| EL141_RS19125 () | 3933329..3933574 | + | 246 | Protein_3720 | GNAT family N-acetyltransferase | - |
| EL141_RS19130 () | 3933951..3934208 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| EL141_RS19135 () | 3934220..3934765 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| EL141_RS19140 () | 3934821..3935567 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| EL141_RS19145 () | 3935736..3935954 | + | 219 | Protein_3724 | hypothetical protein | - |
| EL141_RS22525 () | 3935992..3936108 | + | 117 | Protein_3725 | VOC family protein | - |
| EL141_RS19150 () | 3936353..3937474 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| EL141_RS19155 () | 3937471..3937749 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| EL141_RS19160 () | 3937761..3939074 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| EL141_RS19165 () | 3939087..3939893 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| EL141_RS19170 () | 3940024..3940455 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| EL141_RS19175 () | 3940467..3941099 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| EL141_RS19180 () | 3941116..3941898 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| EL141_RS19185 () | 3942088..3942785 | + | 698 | Protein_3733 | IS1 family transposase IS1A | Transposase |
| EL141_RS19190 () | 3942868..3943125 | - | 258 | WP_000555341.1 | hypothetical protein | - |
| EL141_RS19200 () | 3943464..3943568 | - | 105 | Protein_3735 | integrase core domain-containing protein | - |
| EL141_RS19205 () | 3943801..3943866 | + | 66 | Protein_3736 | omptin family outer membrane protease | - |
| EL141_RS19210 () | 3943886..3944583 | - | 698 | Protein_3737 | IS1 family transposase | - |
| EL141_RS22650 () | 3944670..3944738 | - | 69 | WP_211180522.1 | protein YkiE | - |
| EL141_RS19215 () | 3944875..3945396 | + | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| EL141_RS19220 () | 3945393..3946346 | + | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| EL141_RS19225 () | 3946433..3948757 | + | 2325 | WP_000188262.1 | Fe(3+) dicitrate transport protein FecA | - |
| EL141_RS19230 () | 3948802..3949704 | + | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| EL141_RS19235 () | 3949701..3950699 | + | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| EL141_RS19240 () | 3950696..3951652 | + | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| EL141_RS19245 () | 3951653..3952420 | + | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| EL141_RS19250 () | 3952977..3953234 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| EL141_RS19255 () | 3953317..3954101 | - | 785 | Protein_3747 | IS3 family transposase ISEc52 | Transposase |
| EL141_RS19260 () | 3954168..3955324 | + | 1157 | WP_085947616.1 | IS3 family transposase ISSd1 | Transposase |
| EL141_RS19265 () | 3955478..3957475 | + | 1998 | WP_001293436.1 | choline BCCT transporter BetT | - |
| EL141_RS19275 () | 3957538..3957951 | + | 414 | WP_000625671.1 | DUF2254 domain-containing protein | - |
| EL141_RS19280 () | 3958800..3958801 | - | 2 | WP_085948656.1 | IS3 family transposase IS911 | Transposase |
| EL141_RS19285 () | 3959141..3959377 | - | 237 | Protein_3752 | MFS transporter | - |
| EL141_RS19290 () | 3959367..3959624 | + | 258 | WP_000254999.1 | hypothetical protein | - |
| EL141_RS19295 () | 3959677..3959802 | - | 126 | WP_000594405.1 | hypothetical protein | - |
| EL141_RS19300 () | 3959845..3960963 | - | 1119 | WP_000611568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| EL141_RS19305 () | 3960975..3962192 | - | 1218 | WP_000179691.1 | MFS transporter | - |
| EL141_RS19310 () | 3962801..3964147 | + | 1347 | WP_000483767.1 | IS4 family transposase IS4 | Transposase |
| EL141_RS22460 () | 3964175..3964318 | - | 144 | WP_000050905.1 | hypothetical protein | - |
| EL141_RS19315 () | 3964661..3964890 | - | 230 | Protein_3759 | transposase domain-containing protein | - |
| EL141_RS19325 () | 3965477..3966657 | + | 1181 | Protein_3760 | phosphoethanolamine transferase | - |
| EL141_RS19330 () | 3966973..3968238 | - | 1266 | Protein_3761 | Prophage integrase IntA ; Integrase | Integrase |
| EL141_RS19345 () | 3968704..3969723 | + | 1020 | WP_001318460.1 | NADPH-dependent aldehyde reductase Ahr | - |
| EL141_RS19350 () | 3969727..3970290 | - | 564 | WP_000896738.1 | gluconokinase | - |
| EL141_RS19355 () | 3970507..3971538 | + | 1032 | WP_001197411.1 | L-idonate 5-dehydrogenase | - |
| EL141_RS19360 () | 3971562..3972326 | + | 765 | WP_000998695.1 | gluconate 5-dehydrogenase | - |
| EL141_RS19365 () | 3972389..3973708 | + | 1320 | WP_001128347.1 | gnt-II system L-idonate transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|