MGE detailed information
MGE type: Prophage MGE length: 58527 bp
Accession: NZ_LR134247 Location: 2585878..2644404 Organism: Escherichia coli strain NCTC9040 Replicon: chromosome
Accession: NZ_LR134247 Location: 2585878..2644404 Organism: Escherichia coli strain NCTC9040 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL149_RS12985 () | 2581981..2582967 | - | 987 | Protein_2508 | GGDEF domain-containing protein | - |
| EL149_RS12990 () | 2583040..2583399 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| EL149_RS12995 () | 2583399..2584325 | - | 927 | WP_000257409.1 | glutaminase B | - |
| EL149_RS13000 () | 2584389..2585777 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| EL149_RS13005 () | 2585878..2586759 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| EL149_RS13010 () | 2586837..2587952 | + | 1116 | WP_000258599.1 | putative protein YneK | - |
| EL149_RS13015 () | 2588102..2589292 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| EL149_RS13020 () | 2589317..2589982 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| EL149_RS13025 () | 2590194..2590628 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| EL149_RS13030 () | 2590648..2591031 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| EL149_RS13035 () | 2591063..2591281 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| EL149_RS13040 () | 2591312..2592211 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| EL149_RS13045 () | 2592406..2593593 | + | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| EL149_RS13050 () | 2593720..2593815 | + | 96 | WP_000901367.1 | protein MgtS | - |
| EL149_RS25380 () | 2593815..2593919 | + | 105 | WP_211180496.1 | protein MgtT | - |
| EL149_RS13055 () | 2594034..2594924 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| EL149_RS13060 () | 2595179..2595571 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| EL149_RS13065 () | 2595847..2596365 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EL149_RS13070 () | 2596409..2598454 | - | 2046 | WP_126325779.1 | peptidyl-dipeptidase Dcp | - |
| EL149_RS13075 () | 2598591..2599337 | + | 747 | WP_096967413.1 | hypothetical protein | VF |
| EL149_RS13080 () | 2599426..2600112 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL149_RS13085 () | 2600289..2600492 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL149_RS13090 () | 2600527..2601987 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| EL149_RS13095 () | 2602076..2603359 | - | 1284 | Protein_2531 | MHS family MFS transporter YdfJ | - |
| EL149_RS13100 () | 2603963..2604076 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| EL149_RS13105 () | 2604145..2604378 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL149_RS13110 () | 2604695..2605285 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL149_RS13115 () | 2605383..2605958 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| EL149_RS13120 () | 2605958..2606266 | - | 309 | WP_071524888.1 | phage tail protein | - |
| EL149_RS13125 () | 2606257..2607723 | - | 1467 | Protein_2537 | host specificity protein J | - |
| EL149_RS25265 () | 2607718..2608353 | - | 636 | Protein_2538 | phage portal protein | - |
| EL149_RS13130 () | 2608350..2608556 | - | 207 | WP_000198153.1 | gpW family protein | - |
| EL149_RS13135 () | 2608553..2608975 | - | 423 | WP_001737163.1 | phage terminase large subunit family protein | - |
| EL149_RS13140 () | 2608885..2609517 | - | 633 | WP_077770029.1 | terminase small subunit | - |
| EL149_RS13150 () | 2609906..2610139 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EL149_RS13155 () | 2610197..2610607 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EL149_RS13160 () | 2610759..2610932 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL149_RS13165 () | 2611104..2611259 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| EL149_RS13170 () | 2611339..2611404 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| EL149_RS13175 () | 2611407..2611595 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| EL149_RS13180 () | 2611606..2611818 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL149_RS13185 () | 2612181..2612678 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EL149_RS13190 () | 2612675..2613208 | - | 534 | WP_001092971.1 | lysozyme | - |
| EL149_RS13195 () | 2613205..2613516 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| EL149_RS13200 () | 2613521..2613736 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL149_RS25385 () | 2613956..2614126 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL149_RS13205 () | 2614490..2614705 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL149_RS13210 () | 2615006..2615218 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL149_RS13215 () | 2615273..2615362 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| EL149_RS13220 () | 2615640..2616392 | - | 753 | WP_001047135.1 | antitermination protein | - |
| EL149_RS13225 () | 2616406..2617455 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL149_RS13230 () | 2617457..2617735 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| EL149_RS13235 () | 2617802..2618053 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| EL149_RS13240 () | 2618270..2618425 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL149_RS13245 () | 2618497..2618784 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL149_RS13250 () | 2618784..2619023 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL149_RS13255 () | 2619048..2619353 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| EL149_RS13260 () | 2619556..2619888 | + | 333 | WP_001301033.1 | protein FlxA | - |
| EL149_RS13265 () | 2620325..2621638 | - | 1314 | WP_021558774.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL149_RS25270 () | 2622407..2622694 | - | 288 | Protein_2567 | hypothetical protein | - |
| EL149_RS13280 () | 2623305..2623661 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EL149_RS13285 () | 2623658..2623909 | - | 252 | Protein_2569 | DUF977 family protein | - |
| EL149_RS13290 () | 2623899..2625881 | + | 1983 | Protein_2570 | 3'-5' exoribonuclease | - |
| EL149_RS13295 () | 2625954..2626205 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| EL149_RS13300 () | 2626240..2627520 | + | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| EL149_RS13310 () | 2627708..2628727 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL149_RS13315 () | 2628739..2629953 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL149_RS13320 () | 2630159..2630485 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| EL149_RS13325 () | 2630620..2630961 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL149_RS13330 () | 2630996..2631556 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL149_RS13335 () | 2631559..2632269 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL149_RS13340 () | 2632377..2632682 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL149_RS13345 () | 2632881..2635307 | + | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| EL149_RS13350 () | 2635368..2637791 | + | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| EL149_RS13355 () | 2637802..2638419 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL149_RS13360 () | 2638421..2639275 | + | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL149_RS13365 () | 2639318..2639932 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EL149_RS13370 () | 2640091..2641383 | + | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL149_RS13375 () | 2641336..2642031 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL149_RS13380 () | 2642156..2643376 | - | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| EL149_RS13385 () | 2643511..2644404 | - | 894 | WP_001019525.1 | hypothetical protein | VF |
| EL149_RS13390 () | 2644511..2645764 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| EL149_RS25390 () | 2645813..2645917 | - | 105 | WP_001351109.1 | hypothetical protein | - |
| EL149_RS13395 () | 2646188..2646496 | + | 309 | WP_001737175.1 | acid resistance repetitive basic protein Asr | - |
| EL149_RS13400 () | 2646589..2646672 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| EL149_RS13405 () | 2646772..2647593 | + | 822 | WP_001260865.1 | serine protease | - |
| EL149_RS13410 () | 2647632..2647961 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| EL149_RS13415 () | 2647948..2648313 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| EL149_RS25395 () | 2648420..2648521 | - | 102 | WP_211180498.1 | protein YdgV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|