MGE detailed information
MGE type: Prophage MGE length: 73059 bp
Accession: NZ_LR134240 Location: 2247213..2320271 Organism: Escherichia coli strain NCTC9107 Replicon: chromosome
Accession: NZ_LR134240 Location: 2247213..2320271 Organism: Escherichia coli strain NCTC9107 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL129_RS10920 () | 2243112..2244332 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| EL129_RS10925 () | 2244457..2245152 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| EL129_RS10930 () | 2245105..2246397 | - | 1293 | WP_071593517.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL129_RS10935 () | 2246556..2247170 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EL129_RS10940 () | 2247213..2248067 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL129_RS10945 () | 2248069..2248686 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL129_RS10950 () | 2248697..2251120 | - | 2424 | WP_097340641.1 | dimethyl sulfoxide reductase subunit A | - |
| EL129_RS10955 () | 2251181..2253607 | - | 2427 | WP_001556618.1 | dimethyl sulfoxide reductase subunit A | - |
| EL129_RS10960 () | 2253806..2254111 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL129_RS10965 () | 2254219..2254929 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL129_RS10970 () | 2254932..2255492 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL129_RS10975 () | 2255527..2255868 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL129_RS10980 () | 2256003..2256329 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EL129_RS10985 () | 2256535..2257750 | + | 1216 | Protein_2114 | starvation-sensing protein RspA | - |
| EL129_RS10990 () | 2257762..2258781 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL129_RS11000 () | 2258969..2260250 | - | 1282 | Protein_2116 | IS91 family transposase ISTha3 | Transposase |
| EL129_RS11005 () | 2260285..2260536 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL129_RS11010 () | 2260609..2263080 | - | 2472 | WP_000048342.1 | exonuclease | - |
| EL129_RS11015 () | 2263173..2263352 | - | 180 | WP_097340633.1 | lysis protein YdfD | - |
| EL129_RS11025 () | 2264697..2264885 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EL129_RS11035 () | 2265453..2265671 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| EL129_RS11040 () | 2265831..2265986 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EL129_RS11045 () | 2266153..2266560 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EL129_RS11050 () | 2266644..2266874 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| EL129_RS11055 () | 2266858..2267379 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| EL129_RS11060 () | 2267360..2268325 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| EL129_RS11065 () | 2268366..2268788 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| EL129_RS11070 () | 2268785..2269141 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EL129_RS11075 () | 2269531..2271144 | - | 1614 | WP_001556616.1 | IS66 family transposase ISEc23 | Transposase |
| EL129_RS11080 () | 2271175..2271525 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| EL129_RS11085 () | 2271522..2271947 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| EL129_RS23310 () | 2272292..2272579 | + | 288 | Protein_2133 | hypothetical protein | - |
| EL129_RS11100 () | 2273348..2274661 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL129_RS11105 () | 2275098..2275430 | - | 333 | WP_001301033.1 | protein FlxA | - |
| EL129_RS11110 () | 2275633..2275938 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL129_RS11115 () | 2275963..2276202 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL129_RS11120 () | 2276202..2276489 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL129_RS11125 () | 2276561..2276716 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL129_RS11130 () | 2276933..2277184 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EL129_RS11135 () | 2277251..2277529 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EL129_RS11140 () | 2277531..2278580 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL129_RS11145 () | 2278594..2279346 | + | 753 | WP_001556615.1 | antitermination protein | - |
| EL129_RS11150 () | 2279624..2279713 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL129_RS11155 () | 2279768..2279980 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL129_RS11160 () | 2280281..2280496 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL129_RS23435 () | 2280860..2281030 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL129_RS11165 () | 2281251..2281466 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL129_RS11170 () | 2281471..2281782 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| EL129_RS11175 () | 2281779..2282312 | + | 534 | WP_001556614.1 | lysozyme | - |
| EL129_RS11180 () | 2282309..2282806 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EL129_RS11185 () | 2283169..2283381 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL129_RS11190 () | 2283392..2283580 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EL129_RS11195 () | 2283583..2283648 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| EL129_RS11200 () | 2283729..2283884 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EL129_RS11205 () | 2284067..2284764 | + | 698 | Protein_2156 | IS1 family transposase IS1A | Transposase |
| EL129_RS11210 () | 2284833..2285006 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL129_RS11215 () | 2285158..2285568 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EL129_RS11220 () | 2285626..2285859 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EL129_RS11225 () | 2286248..2286793 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| EL129_RS11230 () | 2286768..2288693 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| EL129_RS11235 () | 2288690..2288896 | + | 207 | WP_000198149.1 | gpW family protein | - |
| EL129_RS11240 () | 2288893..2290494 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| EL129_RS11245 () | 2290475..2291794 | + | 1320 | WP_000123262.1 | S49 family peptidase | - |
| EL129_RS11250 () | 2291804..2292136 | + | 333 | WP_001556613.1 | head decoration protein | - |
| EL129_RS11255 () | 2292192..2293217 | + | 1026 | WP_052934322.1 | major capsid protein | - |
| EL129_RS11260 () | 2293259..2293657 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| EL129_RS11265 () | 2293669..2294022 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| EL129_RS11270 () | 2294034..2294612 | + | 579 | WP_000975070.1 | phage tail protein | - |
| EL129_RS11275 () | 2294609..2295004 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| EL129_RS11280 () | 2295012..2295752 | + | 741 | WP_001349920.1 | phage tail protein | - |
| EL129_RS11285 () | 2295768..2296190 | + | 423 | WP_000479150.1 | phage minor tail protein G | - |
| EL129_RS11290 () | 2296172..2296606 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| EL129_RS11295 () | 2296599..2299160 | + | 2562 | WP_000840335.1 | phage tail tape measure protein | - |
| EL129_RS11300 () | 2299157..2299486 | + | 330 | WP_000847360.1 | phage tail protein | - |
| EL129_RS11305 () | 2299486..2300184 | + | 699 | WP_001152639.1 | phage minor tail protein L | - |
| EL129_RS11310 () | 2300190..2300933 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| EL129_RS11315 () | 2300870..2301502 | + | 633 | WP_071593509.1 | tail assembly protein | - |
| EL129_RS11320 () | 2301563..2304961 | + | 3399 | WP_097340735.1 | host specificity protein J | - |
| EL129_RS11325 () | 2305028..2305627 | + | 600 | WP_001556601.1 | Outer membrane protein X | VF |
| EL129_RS11330 () | 2305692..2308715 | + | 3024 | WP_024195673.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EL129_RS11335 () | 2308715..2309290 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| EL129_RS11340 () | 2309388..2309978 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL129_RS11345 () | 2310295..2310528 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL129_RS11350 () | 2310597..2310710 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EL129_RS11355 () | 2311315..2312598 | + | 1284 | Protein_2186 | MHS family MFS transporter YdfJ | - |
| EL129_RS11360 () | 2312687..2314132 | + | 1446 | WP_089633179.1 | mannitol dehydrogenase family protein | - |
| EL129_RS11365 () | 2314126..2314823 | - | 698 | Protein_2188 | IS1 family transposase IS1A | Transposase |
| EL129_RS11370 () | 2314958..2315161 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL129_RS11375 () | 2315338..2316024 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL129_RS11380 () | 2316113..2316859 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| EL129_RS11385 () | 2316996..2319041 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| EL129_RS11390 () | 2319085..2319603 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EL129_RS11395 () | 2319879..2320271 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| EL129_RS11400 () | 2320526..2321416 | + | 891 | WP_001556598.1 | diguanylate cyclase DgcZ | - |
| EL129_RS23440 () | 2321531..2321635 | - | 105 | WP_211180496.1 | protein MgtT | - |
| EL129_RS11405 () | 2321635..2321730 | - | 96 | WP_000901367.1 | protein MgtS | - |
| EL129_RS11410 () | 2321857..2323044 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| EL129_RS11415 () | 2323239..2324138 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| EL129_RS11420 () | 2324169..2324387 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| EL129_RS11425 () | 2324419..2324802 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| EL129_RS11430 () | 2324822..2325256 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|