MGE detailed information
MGE type: Prophage MGE length: 40521 bp
Accession: NZ_LR134236 Location: 2328711..2369231 Organism: Escherichia coli strain NCTC9008 Replicon: chromosome
Accession: NZ_LR134236 Location: 2328711..2369231 Organism: Escherichia coli strain NCTC9008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL127_RS11285 () | 2324610..2325830 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| EL127_RS11290 () | 2325955..2326650 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL127_RS11295 () | 2326603..2327895 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL127_RS11300 () | 2328054..2328668 | - | 615 | WP_126497001.1 | Tat proofreading chaperone DmsD | - |
| EL127_RS11305 () | 2328711..2329565 | - | 855 | WP_000526504.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL127_RS11310 () | 2329567..2330184 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL127_RS11315 () | 2330195..2332618 | - | 2424 | WP_001433342.1 | dimethyl sulfoxide reductase subunit A | - |
| EL127_RS11320 () | 2332679..2335105 | - | 2427 | WP_021545573.1 | dimethyl sulfoxide reductase subunit A | - |
| EL127_RS11325 () | 2335304..2335609 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL127_RS11330 () | 2335717..2336427 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL127_RS11335 () | 2336430..2336990 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL127_RS11340 () | 2337025..2337366 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL127_RS11345 () | 2337501..2337827 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EL127_RS11350 () | 2338033..2339247 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL127_RS11355 () | 2339259..2340278 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL127_RS11365 () | 2340466..2341746 | - | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EL127_RS11370 () | 2341781..2342032 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL127_RS11375 () | 2342105..2344576 | - | 2472 | WP_000048342.1 | exonuclease | - |
| EL127_RS11380 () | 2344669..2344860 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EL127_RS11385 () | 2344857..2345045 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EL127_RS11395 () | 2345613..2345831 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| EL127_RS11400 () | 2345991..2346146 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EL127_RS11405 () | 2346313..2346720 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EL127_RS11410 () | 2346804..2347034 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| EL127_RS11415 () | 2347018..2347539 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| EL127_RS11420 () | 2347520..2348485 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| EL127_RS11425 () | 2348526..2348948 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| EL127_RS11430 () | 2348945..2349301 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EL127_RS23390 () | 2349912..2350199 | + | 288 | Protein_2214 | hypothetical protein | - |
| EL127_RS11445 () | 2350968..2352281 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL127_RS11450 () | 2352718..2353050 | - | 333 | WP_001301033.1 | protein FlxA | - |
| EL127_RS11455 () | 2353253..2353558 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL127_RS11460 () | 2353583..2353822 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL127_RS11465 () | 2353822..2354109 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL127_RS11470 () | 2354181..2354336 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL127_RS11475 () | 2354553..2354804 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EL127_RS11480 () | 2354871..2355149 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EL127_RS11485 () | 2355151..2356200 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL127_RS11490 () | 2356214..2356966 | + | 753 | WP_096306159.1 | antitermination protein | - |
| EL127_RS11495 () | 2357244..2357333 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL127_RS11500 () | 2357388..2357600 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL127_RS11505 () | 2357901..2358116 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL127_RS23515 () | 2358480..2358650 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL127_RS11510 () | 2358870..2359085 | + | 216 | WP_096306160.1 | class II holin family protein | - |
| EL127_RS11515 () | 2359090..2359401 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| EL127_RS11520 () | 2359398..2359931 | + | 534 | WP_001092971.1 | lysozyme | - |
| EL127_RS11525 () | 2359928..2360424 | + | 497 | Protein_2232 | DUF2514 domain-containing protein | - |
| EL127_RS11530 () | 2360787..2360999 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL127_RS11535 () | 2361010..2361198 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EL127_RS11540 () | 2361201..2361266 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| EL127_RS11545 () | 2361346..2361501 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EL127_RS11550 () | 2361673..2361846 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL127_RS11555 () | 2361998..2362408 | - | 411 | WP_061352531.1 | DUF1398 domain-containing protein | - |
| EL127_RS11560 () | 2362455..2363152 | - | 698 | Protein_2239 | IS1 family transposase | - |
| EL127_RS11565 () | 2363192..2363272 | + | 81 | Protein_2240 | tail fiber assembly protein | - |
| EL127_RS11570 () | 2363370..2363960 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL127_RS11575 () | 2364277..2364510 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL127_RS11580 () | 2364579..2364692 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EL127_RS11585 () | 2365213..2366580 | + | 1368 | Protein_2244 | MHS family MFS transporter | - |
| EL127_RS11590 () | 2366669..2368129 | + | 1461 | WP_000527780.1 | mannitol dehydrogenase family protein | - |
| EL127_RS11595 () | 2368165..2368368 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL127_RS11600 () | 2368545..2369231 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL127_RS11605 () | 2369320..2370066 | - | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EL127_RS11610 () | 2370203..2372248 | + | 2046 | WP_021545555.1 | peptidyl-dipeptidase Dcp | - |
| EL127_RS11615 () | 2372292..2372810 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EL127_RS11620 () | 2373086..2373478 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|