NZ_LR1342361194378..1386043

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 191666 bp
Accession: NZ_LR134236        Location: 1194378..1386043         Organism: Escherichia coli strain NCTC9008       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EL127_RS05845 () 1191952..1193379 + 1428 WP_001311037.1 two component system sensor histidine kinase QseE/GlrK -
EL127_RS05850 () 1193544..1194257 + 714 WP_001215861.1 two-component system QseEF-associated lipoprotein QseG -
EL127_RS05855 () 1194247..1195581 + 1335 WP_001295369.1 two-component system response regulator GlrR -
EL127_RS05860 () 1195642..1195980 + 339 WP_000717694.1 nitrogen regulatory protein P-II -
EL127_RS05865 () 1196025..1197215 - 1191 WP_000883122.1 NO-inducible flavohemoprotein -
EL127_RS05870 () 1197543..1198796 + 1254 WP_000919159.1 serine hydroxymethyltransferase -
EL127_RS05875 () 1198994..1200187 - 1194 WP_001200766.1 ROK family protein -
EL127_RS05880 () 1200305..1203586 + 3282 WP_016246220.1 DUF5107 domain-containing protein -
EL127_RS05885 () 1203683..1204666 + 984 WP_001124894.1 substrate-binding domain-containing protein -
EL127_RS05890 () 1204689..1206200 + 1512 WP_000493473.1 sugar ABC transporter ATP-binding protein -
EL127_RS05895 () 1206225..1207223 + 999 WP_001276688.1 ABC transporter permease -
EL127_RS05900 () 1207256..1208350 + 1095 WP_000700790.1 zinc-binding dehydrogenase -
EL127_RS05905 () 1208362..1209234 + 873 WP_000158537.1 aldose 1-epimerase -
EL127_RS05910 () 1209282..1209704 - 423 WP_001094732.1 DoxX family protein -
EL127_RS05915 () 1209801..1211003 - 1203 WP_000660788.1 phenylpropionate dioxygenase ferredoxin reductase subunit -
EL127_RS05920 () 1211013..1211825 - 813 WP_001281377.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase -
EL127_RS05925 () 1211822..1212142 - 321 WP_001080102.1 bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit -
EL127_RS05930 () 1212142..1212660 - 519 WP_001276076.1 3-phenylpropionate/cinnamic acid dioxygenase subunit beta -
EL127_RS05935 () 1212657..1214018 - 1362 WP_000211172.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
EL127_RS05940 () 1214154..1215044 + 891 WP_000423257.1 DNA-binding transcriptional regulator HcaR -
EL127_RS05945 () 1215204..1216343 + 1140 WP_000244174.1 3-phenylpropionate MFS transporter -
EL127_RS05950 () 1216335..1217615 - 1281 WP_000982997.1 stationary phase inducible protein CsiE -
EL127_RS05955 () 1217806..1218660 - 855 WP_001338906.1 alpha/beta hydrolase -
EL127_RS05960 () 1218805..1219608 - 804 WP_000553451.1 inositol-1-monophosphatase -
EL127_RS05965 () 1219727..1220467 + 741 WP_000940020.1 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -
EL127_RS05970 () 1220737..1221225 + 489 WP_001241356.1 Fe-S cluster assembly transcriptional regulator IscR -
EL127_RS05975 () 1221466..1222680 + 1215 WP_001295373.1 cysteine desulfurase -
EL127_RS05980 () 1222708..1223094 + 387 WP_000331707.1 Fe-S cluster assembly scaffold IscU -
EL127_RS05985 () 1223111..1223434 + 324 WP_000028953.1 iron-sulfur cluster assembly protein IscA -
EL127_RS05990 () 1223530..1224045 + 516 WP_000384413.1 co-chaperone HscB -
EL127_RS05995 () 1224062..1225912 + 1851 WP_001196613.1 Fe-S protein assembly chaperone HscA -
EL127_RS06000 () 1225914..1226249 + 336 WP_001124469.1 ISC system 2Fe-2S type ferredoxin -
EL127_RS06005 () 1226261..1226461 + 201 WP_000523616.1 Fe-S cluster assembly protein IscX -
EL127_RS06010 () 1226519..1227802 + 1284 WP_126496938.1 aminopeptidase PepB -
EL127_RS06015 () 1227944..1228720 + 777 WP_001295479.1 enhanced serine sensitivity protein SseB -
EL127_RS06020 () 1229538..1230383 - 846 WP_000108626.1 3-mercaptopyruvate sulfurtransferase -
EL127_RS06025 () 1230590..1235551 + 4962 WP_000736253.1 alpha2-macroglobulin -
EL127_RS06030 () 1235552..1237864 + 2313 WP_001137675.1 peptidoglycan glycosyltransferase PbpC -
EL127_RS06035 () 1238013..1238444 + 432 WP_000963837.1 nucleoside-diphosphate kinase -
EL127_RS06040 () 1238594..1239748 + 1155 WP_000003317.1 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN -
EL127_RS06045 () 1240033..1241046 + 1014 WP_001090844.1 cytoskeleton protein RodZ -
EL127_RS06050 () 1241073..1242191 + 1119 WP_000551818.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
EL127_RS06055 () 1242302..1243576 + 1275 WP_001107167.1 histidine--tRNA ligase -
EL127_RS06060 () 1243594..1244214 + 621 WP_000409205.1 ancillary SecYEG translocon subunit YfgM -
EL127_RS06065 () 1244225..1245403 + 1179 WP_001177048.1 outer membrane protein assembly factor BamB -
EL127_RS06070 () 1245521..1246993 + 1473 WP_000249410.1 ribosome biogenesis GTPase Der -
EL127_RS06075 () 1247062..1247277 + 216 WP_001300368.1 zinc ribbon domain-containing protein -
EL127_RS06080 () 1247274..1248644 - 1371 WP_000937920.1 exodeoxyribonuclease VII large subunit -
EL127_RS06085 () 1248806..1250272 + 1467 WP_001299507.1 IMP dehydrogenase -
EL127_RS06090 () 1250341..1251918 + 1578 WP_000138282.1 glutamine-hydrolyzing GMP synthase -
EL127_RS06095 () 1252226..1253416 + 1191 WP_039274249.1 Vitamin B12 import system permease protein BtuC ; Integrase Integrase
EL127_RS06100 () 1253540..1254169 + 630 WP_050862362.1 hypothetical protein -
EL127_RS06105 () 1254747..1255718 - 972 WP_126496939.1 LuxR family transcriptional regulator -
EL127_RS06110 () 1255781..1256478 - 698 Protein_1181 IS1 family transposase IS1G Transposase
EL127_RS06115 () 1256626..1257951 - 1326 WP_021512928.1 pyridine nucleotide-disulfide oxidoreductase -
EL127_RS06120 () 1258061..1258758 + 698 Protein_1183 IS1 family transposase IS1G Transposase
EL127_RS06125 () 1258859..1259140 - 282 WP_000639434.1 hypothetical protein -
EL127_RS06130 () 1259390..1259638 + 249 Protein_1185 IS3 family transposase ISEhe3 Transposase
EL127_RS06135 () 1259639..1260472 - 834 Protein_1186 IS110 family transposase IS1663 Transposase
EL127_RS06140 () 1260697..1261082 + 386 Protein_1187 IS5 family transposase ISPa52 Transposase
EL127_RS06145 () 1261307..1262458 - 1152 WP_001513918.1 hypothetical protein VF
EL127_RS06150 () 1262483..1263361 - 879 WP_001513917.1 M48 family metalloprotease -
EL127_RS06155 () 1263339..1263836 - 498 WP_001514138.1 heat resistance protein PsiE-GI -
EL127_RS06160 () 1263839..1265548 - 1710 WP_057777654.1 heat resistance system K+/H+ antiporter KefB-GI -
EL127_RS06165 () 1265552..1265992 - 441 WP_000786815.1 heat resistance system thioredoxin Trx-GI -
EL127_RS06170 () 1265982..1267127 - 1146 WP_004118192.1 hypothetical protein -
EL127_RS06175 () 1267151..1267363 - 213 WP_000896642.1 hypothetical protein -
EL127_RS06180 () 1267363..1270212 - 2850 WP_001513912.1 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase VF
EL127_RS06185 () 1270318..1270887 - 570 WP_000350436.1 hypothetical protein VF
EL127_RS06190 () 1270922..1271203 - 282 WP_024167947.1 helix-turn-helix domain-containing protein -
EL127_RS06195 () 1271334..1271971 - 638 Protein_1198 IS1 family transposase -
EL127_RS06200 () 1272045..1272739 + 695 WP_126496940.1 IS1 family transposase ISEc30 Transposase
EL127_RS06205 () 1272881..1273578 + 698 Protein_1200 IS1 family transposase IS1R Transposase
EL127_RS06210 () 1273595..1273942 + 348 Protein_1201 ABC transporter permease subunit -
EL127_RS06215 () 1273954..1275000 + 1047 WP_000192349.1 Glutamate 5-kinase VF
EL127_RS06220 () 1275109..1276041 - 933 WP_000081352.1 homocysteine S-methyltransferase -
EL127_RS06225 () 1276028..1277431 - 1404 WP_001373486.1 S-methylmethionine permease -
EL127_RS06230 () 1277675..1278655 + 981 WP_000019407.1 IS5 family transposase IS5D Transposase
EL127_RS06235 () 1278883..1279200 + 318 WP_001513659.1 hypothetical protein -
EL127_RS06240 () 1279150..1279563 - 414 Protein_1207 IS3 family transposase ISLad1 Transposase
EL127_RS06245 () 1279487..1279846 - 360 WP_001513660.1 hypothetical protein -
EL127_RS06250 () 1279874..1280053 - 180 WP_001513661.1 hypothetical protein -
EL127_RS06255 () 1280058..1280438 - 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
EL127_RS06260 () 1280438..1280659 - 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
EL127_RS06265 () 1280842..1282398 + 1557 WP_032265507.1 type I restriction-modification system subunit M -
EL127_RS06270 () 1282395..1283657 + 1263 WP_032265504.1 restriction endonuclease subunit S -
EL127_RS06275 () 1283779..1286895 + 3117 WP_032265505.1 HsdR family type I site-specific deoxyribonuclease -
EL127_RS06280 () 1287109..1287806 + 698 Protein_1215 IS1 family transposase IS1D Transposase
EL127_RS06285 () 1287861..1288091 + 231 WP_023308174.1 AlpA family phage regulatory protein -
EL127_RS06290 () 1288097..1288954 + 858 WP_050862364.1 helicase RepA family protein -
EL127_RS06295 () 1288941..1289723 + 783 WP_050868168.1 hypothetical protein -
EL127_RS06300 () 1290389..1290742 + 354 WP_001588179.1 conjugal transfer transcriptional regulator TraJ -
EL127_RS06305 () 1290824..1291618 + 795 WP_096253537.1 P-type conjugative transfer protein TrbJ -
EL127_RS23245 () 1291630..1291803 + 174 WP_023308170.1 hypothetical protein -
EL127_RS06310 () 1291806..1293197 + 1392 WP_096253544.1 P-type conjugative transfer protein TrbL -
EL127_RS06315 () 1293279..1293704 + 426 WP_096253538.1 HigA family addiction module antidote protein -
EL127_RS06320 () 1293920..1296259 - 2340 WP_096253539.1 AAA family ATPase -
EL127_RS06325 () 1296234..1296761 - 528 WP_197718960.1 hypothetical protein -
EL127_RS06330 () 1296896..1298122 - 1227 WP_096253541.1 DUF4297 domain-containing protein -
EL127_RS06335 () 1298735..1299517 + 783 WP_050861877.1 DUF1837 domain-containing protein -
EL127_RS06340 () 1299504..1303007 + 3504 WP_050861878.1 DEAD/DEAH box helicase -
EL127_RS06345 () 1303633..1306713 + 3081 WP_193333935.1 DEAD/DEAH box helicase family protein -
EL127_RS06350 () 1307255..1307794 - 540 WP_000755173.1 DUF5384 family protein -
EL127_RS06355 () 1307810..1308328 - 519 WP_072147136.1 glycine zipper 2TM domain-containing protein -
EL127_RS06360 () 1308639..1308830 - 192 WP_000076001.1 DUF2633 family protein -
EL127_RS23250 () 1308848..1309000 + 153 WP_000017552.1 hypothetical protein -
EL127_RS06365 () 1309182..1311425 + 2244 WP_000772732.1 hypothetical protein VF
EL127_RS06370 () 1311464..1313005 - 1542 WP_001121363.1 exopolyphosphatase -
EL127_RS06375 () 1313010..1315076 - 2067 WP_000529576.1 polyphosphate kinase 1 -
EL127_RS06380 () 1315247..1315885 - 639 WP_001028608.1 DNA primase VF
EL127_RS06385 () 1315885..1316922 - 1038 WP_001295474.1 hypothetical protein VF
EL127_RS06390 () 1317247..1317873 + 627 WP_001295473.1 uracil phosphoribosyltransferase -
EL127_RS06395 () 1317959..1319248 + 1290 WP_000198328.1 uracil permease -
EL127_RS06400 () 1319343..1320044 + 702 WP_001307333.1 DnaA inactivator Hda -
EL127_RS06405 () 1320182..1320541 - 360 WP_000166449.1 arsenate reductase (glutaredoxin) -
EL127_RS06410 () 1320562..1322025 - 1464 WP_126496941.1 beta-barrel assembly-enhancing protease -
EL127_RS06415 () 1322238..1323299 + 1062 WP_000892044.1 AI-2E family transporter -
EL127_RS06425 () 1323337..1324186 - 850 Protein_1245 formate transporter -
EL127_RS06430 () 1324208..1326220 - 2013 WP_001251548.1 hypothetical protein VF
EL127_RS06435 () 1326250..1326663 - 414 WP_001338919.1 hydrogenase 4 assembly chaperone HyfJ -
EL127_RS06440 () 1326656..1327414 - 759 WP_000075560.1 hydrogenase 4 catalytic subunit HyfI -
EL127_RS06445 () 1327411..1327956 - 546 WP_000916058.1 hydrogenase 4 subunit H -
EL127_RS06450 () 1327966..1329681 - 1716 WP_001102280.1 hydrogenase 4 catalytic subunit HyfG -
EL127_RS06455 () 1329671..1331251 - 1581 Protein_1251 hydrogenase 4 subunit F -
EL127_RS06460 () 1331256..1331906 - 651 WP_000148113.1 hydrogenase 4 membrane subunit -
EL127_RS06465 () 1331918..1333270 - 1353 WP_001338922.1 hydrogenase 4 subunit HyfD -
EL127_RS06470 () 1333246..1333356 - 111 WP_000429114.1 hypothetical protein -
EL127_RS06475 () 1333373..1334320 - 948 WP_001300463.1 hydrogenase 4 subunit HyfC -
EL127_RS06480 () 1334331..1336348 - 2018 Protein_1256 hydrogenase 4 subunit B -
EL127_RS06485 () 1336348..1336965 - 618 WP_001295470.1 hydrogenase 4 subunit HyfA -
EL127_RS06490 () 1337218..1337688 - 471 WP_001068682.1 thioredoxin-dependent thiol peroxidase -
EL127_RS06495 () 1337688..1338260 - 573 WP_000176187.1 glycine cleavage system transcriptional repressor -
EL127_RS06500 () 1338406..1339284 + 879 WP_001295469.1 4-hydroxy-tetrahydrodipicolinate synthase -
EL127_RS06505 () 1339301..1340335 + 1035 WP_001297320.1 outer membrane protein assembly factor BamC -
EL127_RS06510 () 1340548..1341261 + 714 WP_001295467.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
EL127_RS06515 () 1341429..1342292 + 864 WP_001267498.1 neutral zinc metallopeptidase -
EL127_RS06520 () 1342307..1344322 + 2016 WP_000829396.1 tRNA cytosine(34) acetyltransferase TmcA -
EL127_RS06525 () 1344396..1345094 + 699 WP_000679812.1 esterase -
EL127_RS06530 () 1345203..1345403 - 201 WP_000383836.1 YpfN family protein -
EL127_RS06535 () 1345431..1346558 - 1128 WP_001277801.1 succinyl-diaminopimelate desuccinylase -
EL127_RS06540 () 1346562..1346918 - 357 WP_000258247.1 ArsC family reductase -
EL127_RS06545 () 1347299..1347358 + 60 WP_001386977.1 protein YpfM -
EL127_RS06550 () 1347457..1350570 - 3114 WP_126496942.1 hypothetical protein VF
EL127_RS06555 () 1350734..1352434 - 1701 WP_001300881.1 nitrate/nitrite two-component system sensor histidine kinase NarQ -
EL127_RS06560 () 1352640..1354619 + 1980 WP_001078880.1 formate-dependent uric acid utilization protein AegA -
EL127_RS06565 () 1354687..1355262 + 576 WP_001300814.1 GDP-mannose pyrophosphatase NudK -
EL127_RS06570 () 1355388..1356431 + 1044 WP_001270542.1 DUF1176 domain-containing protein -
EL127_RS06575 () 1356512..1358515 - 2004 WP_000087280.1 transketolase -
EL127_RS06580 () 1358535..1359485 - 951 WP_001003709.1 transaldolase -
EL127_RS06585 () 1359774..1362053 + 2280 WP_126496943.1 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase -
EL127_RS06590 () 1362346..1362681 + 336 WP_000356956.1 ethanolamine utilization microcompartment protein EutS -
EL127_RS06595 () 1362694..1363173 + 480 WP_000820762.1 ethanolamine utilization acetate kinase EutP -
EL127_RS06600 () 1363148..1363849 + 702 WP_000733906.1 ethanolamine utilization acetate kinase EutQ -
EL127_RS06605 () 1363846..1364649 + 804 WP_000651298.1 ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT -
EL127_RS06610 () 1364646..1365662 + 1017 WP_000582977.1 phosphate acetyltransferase -
EL127_RS06615 () 1365701..1365994 + 294 WP_000387713.1 ethanolamine utilization microcompartment protein EutM -
EL127_RS06620 () 1366101..1366388 + 288 WP_000762196.1 ethanolamine utilization microcompartment protein EutN -
EL127_RS06625 () 1366400..1367803 + 1404 WP_001075690.1 hypothetical protein VF
EL127_RS06630 () 1367814..1368650 + 837 WP_000929711.1 ethanolamine utilization protein EutJ -
EL127_RS06635 () 1368640..1369827 + 1188 WP_001300552.1 Serine hydroxymethyltransferase VF
EL127_RS06640 () 1370044..1371270 + 1227 WP_000512372.1 ethanolamine utilization protein EutH -
EL127_RS06645 () 1371267..1372670 + 1404 WP_126496944.1 ethanolamine ammonia-lyase reactivating factor EutA -
EL127_RS06650 () 1372682..1374043 + 1362 WP_000769961.1 ethanolamine ammonia-lyase subunit alpha -
EL127_RS06655 () 1374064..1374951 + 888 WP_000372364.1 ethanolamine ammonia-lyase subunit beta -
EL127_RS06660 () 1374961..1375620 + 660 WP_001111038.1 ethanolamine utilization microcompartment protein EutL -
EL127_RS06665 () 1375633..1376133 + 501 WP_000606257.1 ethanolamine utilization microcompartment protein EutK -
EL127_RS06670 () 1376179..1377231 + 1053 Protein_1294 HTH-type transcriptional regulator EutR -
EL127_RS06675 () 1377237..1378136 - 900 WP_000801365.1 oxygen-dependent coproporphyrinogen oxidase -
EL127_RS06680 () 1378140..1379009 - 870 WP_000102886.1 N-acetylmuramoyl-L-alanine amidase AmiA -
EL127_RS06685 () 1379223..1379648 + 426 WP_000405996.1 GNAT family acetyltransferase -
EL127_RS06690 () 1379635..1380084 + 450 WP_001300381.1 DUF2919 domain-containing protein -
EL127_RS06695 () 1380291..1380866 + 576 WP_000838937.1 RpoE-regulated lipoprotein -
EL127_RS06700 () 1380962..1381861 + 900 WP_000084590.1 porphyrinogen peroxidase -
EL127_RS06705 () 1381919..1383223 - 1305 WP_126496945.1 penicillin binding protein PBP4B -
EL127_RS06710 () 1383228..1384652 - 1425 WP_001040483.1 PTS N-acetylmuramic acid transporter subunit IIBC -
EL127_RS06715 () 1384656..1385552 - 897 WP_001159160.1 N-acetylmuramic acid 6-phosphate etherase -
EL127_RS06720 () 1385716..1386573 + 858 WP_000966445.1 HTH-type transcriptional regulator MurR -
EL127_RS06725 () 1386702..1387493 + 792 WP_000517431.1 SDR family oxidoreductase UcpA -
EL127_RS06730 () 1387651..1388667 + 1017 WP_000290223.1 thiosulfate/sulfate ABC transporter substrate-binding protein CysP -
EL127_RS06735 () 1388667..1389500 + 834 WP_000458405.1 sulfate/thiosulfate ABC transporter permease CysT -
EL127_RS06740 () 1389500..1390375 + 876 WP_000852686.1 sulfate/thiosulfate ABC transporter permease CysW -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance