MGE detailed information
MGE type: Genomic_island MGE length: 47104 bp
Accession: NZ_LR134231 Location: 3931617..3978720 Organism: Escherichia coli strain NCTC9087 Replicon: chromosome
Accession: NZ_LR134231 Location: 3931617..3978720 Organism: Escherichia coli strain NCTC9087 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL105_RS19060 () | 3927257..3927940 | + | 684 | WP_001295597.1 | nucleoside recognition pore and gate family inner membrane transporter | - |
| EL105_RS19065 () | 3927937..3928398 | + | 462 | WP_000211971.1 | YjiG family protein | - |
| EL105_RS19070 () | 3928411..3929583 | + | 1173 | WP_000568432.1 | beta-aspartyl-peptidase | - |
| EL105_RS19075 () | 3929648..3930559 | + | 912 | WP_000340740.1 | hypochlorite stress DNA-binding transcriptional regulator HypT | - |
| EL105_RS19080 () | 3930552..3930944 | - | 393 | WP_000986224.1 | anti-adapter protein IraD | - |
| EL105_RS19085 () | 3930941..3931024 | - | 84 | WP_120795393.1 | iraD leader peptide IdlP | - |
| EL105_RS19090 () | 3931617..3932447 | + | 831 | WP_000062552.1 | YjfZ/YjiC family protein | - |
| EL105_RS19095 () | 3932588..3933361 | - | 774 | WP_000833677.1 | Uxu operon transcriptional regulator | - |
| EL105_RS19100 () | 3933576..3935036 | - | 1461 | WP_000208220.1 | fructuronate reductase | - |
| EL105_RS19105 () | 3935117..3936301 | - | 1185 | WP_000438591.1 | mannonate dehydratase | - |
| EL105_RS19110 () | 3936753..3936845 | + | 93 | Protein_3717 | hypothetical protein | - |
| EL105_RS19115 () | 3937088..3937990 | - | 903 | WP_000832240.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| EL105_RS19120 () | 3938010..3938513 | - | 504 | WP_000872005.1 | Protein FimG | VF |
| EL105_RS19125 () | 3938526..3939056 | - | 531 | WP_001244826.1 | Protein FimF | VF |
| EL105_RS19130 () | 3939066..3941702 | - | 2637 | WP_000120930.1 | Outer membrane usher protein FimD | VF |
| EL105_RS19135 () | 3941769..3942494 | - | 726 | WP_000066560.1 | Chaperone protein FimC | VF |
| EL105_RS19140 () | 3942531..3943070 | - | 540 | WP_000824105.1 | putative major fimbrial subunit LpfA | VF |
| EL105_RS19145 () | 3943135..3943683 | - | 549 | WP_000695546.1 | Type-1 fimbrial protein, A chain | VF |
| EL105_RS19150 () | 3944164..3944760 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| EL105_RS19155 () | 3945238..3945840 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| EL105_RS19160 () | 3947296..3948012 | + | 717 | WP_001443018.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EL105_RS19165 () | 3948032..3949138 | + | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| EL105_RS19170 () | 3949203..3950183 | + | 981 | WP_000991415.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EL105_RS19175 () | 3950191..3950841 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| EL105_RS22365 () | 3951886..3952038 | - | 153 | WP_001280445.1 | hypothetical protein | - |
| EL105_RS19200 () | 3952123..3952320 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| EL105_RS19205 () | 3952332..3952820 | - | 489 | WP_000777547.1 | hypothetical protein | - |
| EL105_RS19210 () | 3952817..3953191 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| EL105_RS19215 () | 3953281..3953649 | - | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EL105_RS19220 () | 3953812..3954033 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| EL105_RS19225 () | 3954096..3954572 | - | 477 | WP_001186774.1 | RadC family protein | - |
| EL105_RS19230 () | 3954588..3954758 | - | 171 | Protein_3738 | antirestriction protein | - |
| EL105_RS19235 () | 3954743..3956278 | - | 1536 | WP_000939409.1 | hypothetical protein | - |
| EL105_RS22440 () | 3956399..3956605 | - | 207 | Protein_3740 | autotransporter adhesin family protein | - |
| EL105_RS19250 () | 3957353..3957478 | + | 126 | Protein_3741 | hemolysin activation protein | - |
| EL105_RS19255 () | 3957687..3957887 | - | 201 | WP_000823256.1 | hypothetical protein | - |
| EL105_RS19260 () | 3958169..3958300 | + | 132 | Protein_3743 | IS3 family transposase | - |
| EL105_RS19270 () | 3958620..3958877 | - | 258 | WP_000555341.1 | hypothetical protein | - |
| EL105_RS19280 () | 3959216..3959320 | - | 105 | Protein_3745 | integrase core domain-containing protein | - |
| EL105_RS19285 () | 3959553..3959618 | + | 66 | Protein_3746 | omptin family outer membrane protease | - |
| EL105_RS19290 () | 3959638..3960335 | - | 698 | Protein_3747 | IS1 family transposase | - |
| EL105_RS22570 () | 3960422..3960490 | - | 69 | WP_211180522.1 | protein YkiE | - |
| EL105_RS19295 () | 3960627..3961148 | + | 522 | WP_001283626.1 | putative RNA polymerase sigma factor FecI | VF |
| EL105_RS19300 () | 3961145..3962098 | + | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| EL105_RS19305 () | 3962185..3964509 | + | 2325 | WP_000188267.1 | Fe(3+) dicitrate transport protein FecA | - |
| EL105_RS19310 () | 3964554..3965456 | + | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| EL105_RS19315 () | 3965453..3966451 | + | 999 | WP_000125187.1 | Fe(3+) dicitrate transport system permease protein FecC | VF |
| EL105_RS19320 () | 3966448..3967404 | + | 957 | WP_000684856.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| EL105_RS19325 () | 3967405..3968172 | + | 768 | WP_000175457.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| EL105_RS19330 () | 3968730..3968987 | - | 258 | WP_000177060.1 | hypothetical protein | - |
| EL105_RS19335 () | 3969070..3969974 | - | 905 | Protein_3757 | IS3 family transposase | - |
| EL105_RS19345 () | 3970039..3971190 | + | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| EL105_RS19350 () | 3971203..3971460 | - | 258 | Protein_3759 | IS3 family transposase IS911 | Transposase |
| EL105_RS19355 () | 3971561..3972133 | + | 573 | WP_000227281.1 | hypothetical protein | - |
| EL105_RS19360 () | 3972182..3973006 | - | 825 | WP_000594911.1 | hypothetical protein | - |
| EL105_RS19365 () | 3974044..3974508 | - | 465 | WP_000749342.1 | helix-turn-helix domain-containing protein | - |
| EL105_RS19370 () | 3974749..3975243 | + | 495 | WP_000145203.1 | membrane protein | - |
| EL105_RS19375 () | 3975304..3976149 | - | 846 | WP_000331917.1 | hypothetical protein | - |
| EL105_RS19380 () | 3976163..3976723 | - | 561 | WP_000190110.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL105_RS19385 () | 3976916..3977382 | + | 467 | Protein_3766 | DUF1643 domain-containing protein | - |
| EL105_RS19390 () | 3978388..3978720 | + | 333 | WP_001261095.1 | NIPSNAP family protein | - |
| EL105_RS19395 () | 3978853..3980763 | - | 1911 | WP_000083138.1 | site-specific integrase | - |
| EL105_RS19405 () | 3981134..3982153 | + | 1020 | WP_126496419.1 | NADPH-dependent aldehyde reductase Ahr | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|