MGE detailed information
MGE type: Prophage MGE length: 39022 bp
Accession: NZ_LR134231 Location: 2191101..2230122 Organism: Escherichia coli strain NCTC9087 Replicon: chromosome
Accession: NZ_LR134231 Location: 2191101..2230122 Organism: Escherichia coli strain NCTC9087 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL105_RS10635 () | 2187000..2188220 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| EL105_RS10640 () | 2188345..2189040 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL105_RS10645 () | 2188993..2190285 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL105_RS10650 () | 2190444..2191058 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EL105_RS10655 () | 2191101..2191955 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL105_RS10660 () | 2191957..2192574 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL105_RS10665 () | 2192585..2195008 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| EL105_RS10670 () | 2195069..2197495 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| EL105_RS10675 () | 2197694..2197999 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL105_RS10680 () | 2198107..2198817 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL105_RS10685 () | 2198820..2199380 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL105_RS10690 () | 2199415..2199756 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL105_RS10695 () | 2199891..2200217 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EL105_RS10700 () | 2200423..2201637 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL105_RS10705 () | 2201649..2202668 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL105_RS10715 () | 2202856..2204136 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EL105_RS10720 () | 2204171..2204422 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL105_RS10725 () | 2204495..2206102 | - | 1608 | Protein_2080 | 3'-5' exoribonuclease | - |
| EL105_RS10730 () | 2206165..2206425 | + | 261 | Protein_2081 | IS3 family transposase ISSfl10 | Transposase |
| EL105_RS10735 () | 2206490..2207641 | + | 1152 | WP_001573439.1 | IS30 family transposase IS30D | Transposase |
| EL105_RS10740 () | 2207648..2208544 | + | 897 | Protein_2083 | IS3 family transposase ISSd1 | Transposase |
| EL105_RS10745 () | 2208587..2208967 | - | 381 | Protein_2084 | hypothetical protein | - |
| EL105_RS10750 () | 2208957..2209208 | + | 252 | Protein_2085 | DUF977 family protein | - |
| EL105_RS10755 () | 2209205..2209561 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EL105_RS22400 () | 2210172..2210459 | + | 288 | Protein_2087 | hypothetical protein | - |
| EL105_RS10770 () | 2211228..2212541 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL105_RS10775 () | 2212978..2213310 | - | 333 | WP_001301033.1 | protein FlxA | - |
| EL105_RS10780 () | 2213513..2213818 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL105_RS10785 () | 2213843..2214082 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL105_RS10790 () | 2214082..2214369 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL105_RS10795 () | 2214441..2214596 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL105_RS10800 () | 2214813..2215064 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EL105_RS10805 () | 2215131..2215409 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EL105_RS10810 () | 2215411..2216460 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL105_RS10815 () | 2216474..2217226 | + | 753 | WP_001047135.1 | antitermination protein | - |
| EL105_RS10820 () | 2217504..2217593 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL105_RS10825 () | 2217648..2217860 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL105_RS10830 () | 2218161..2218376 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL105_RS22515 () | 2218740..2218910 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL105_RS10835 () | 2219130..2219345 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL105_RS10840 () | 2219350..2219661 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| EL105_RS10845 () | 2219658..2220191 | + | 534 | WP_001092971.1 | lysozyme | - |
| EL105_RS10850 () | 2220188..2220685 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EL105_RS10855 () | 2221048..2221260 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL105_RS10860 () | 2221271..2221459 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EL105_RS10865 () | 2221462..2221527 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| EL105_RS10870 () | 2221607..2221762 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EL105_RS10875 () | 2221934..2222107 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL105_RS10880 () | 2222259..2222669 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EL105_RS10885 () | 2222727..2222960 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EL105_RS10890 () | 2223349..2223894 | + | 546 | WP_000453589.1 | DNA-packaging protein | - |
| EL105_RS10895 () | 2223852..2224178 | + | 327 | Protein_2114 | phage tail protein | - |
| EL105_RS10900 () | 2224145..2224453 | + | 309 | WP_071524888.1 | phage tail protein | - |
| EL105_RS10905 () | 2224453..2225028 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| EL105_RS10910 () | 2225126..2225716 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL105_RS10915 () | 2226033..2226266 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL105_RS10920 () | 2226335..2226448 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EL105_RS10925 () | 2227052..2228335 | + | 1284 | Protein_2120 | MHS family MFS transporter YdfJ | - |
| EL105_RS10930 () | 2228424..2229884 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| EL105_RS10935 () | 2229919..2230122 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL105_RS10940 () | 2230299..2230985 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL105_RS10945 () | 2231074..2231820 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EL105_RS10950 () | 2231957..2234002 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| EL105_RS10955 () | 2234046..2234564 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|