MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_LR134228 Location: 4459534..4468885 Organism: Escherichia coli strain NCTC9699 Replicon: chromosome
Accession: NZ_LR134228 Location: 4459534..4468885 Organism: Escherichia coli strain NCTC9699 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL118_RS21700 () | 4454695..4455996 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| EL118_RS21705 () | 4456112..4456450 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| EL118_RS21710 () | 4456426..4458123 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| EL118_RS21715 () | 4458160..4458735 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| EL118_RS21725 () | 4459534..4461072 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EL118_RS21735 () | 4461438..4462772 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| EL118_RS21740 () | 4462852..4464999 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| EL118_RS21745 () | 4465058..4466515 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| EL118_RS21750 () | 4466752..4468269 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| EL118_RS21755 () | 4468388..4468561 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EL118_RS21760 () | 4468589..4468885 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EL118_RS21765 () | 4469112..4469384 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| EL118_RS21770 () | 4469396..4469626 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| EL118_RS21775 () | 4469807..4471438 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| EL118_RS21780 () | 4471435..4472154 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.005 |