MGE detailed information
MGE type: Prophage MGE length: 61597 bp
Accession: NZ_LR134228 Location: 2348139..2409735 Organism: Escherichia coli strain NCTC9699 Replicon: chromosome
Accession: NZ_LR134228 Location: 2348139..2409735 Organism: Escherichia coli strain NCTC9699 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL118_RS11375 () | 2344038..2345258 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| EL118_RS11380 () | 2345383..2346078 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL118_RS11385 () | 2346031..2347323 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL118_RS11390 () | 2347482..2348096 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EL118_RS11395 () | 2348139..2348993 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL118_RS11400 () | 2348995..2349612 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL118_RS11405 () | 2349623..2352046 | - | 2424 | WP_001433342.1 | dimethyl sulfoxide reductase subunit A | - |
| EL118_RS11410 () | 2352107..2354533 | - | 2427 | WP_000041681.1 | dimethyl sulfoxide reductase subunit A | - |
| EL118_RS11415 () | 2354732..2355037 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL118_RS11420 () | 2355145..2355855 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL118_RS11425 () | 2355858..2356418 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL118_RS11430 () | 2356453..2356794 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL118_RS11435 () | 2356929..2357255 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EL118_RS11440 () | 2357461..2358675 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL118_RS11445 () | 2358687..2359706 | + | 1020 | WP_023281252.1 | Zn-dependent oxidoreductase | - |
| EL118_RS11455 () | 2359894..2361174 | - | 1281 | WP_021533434.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EL118_RS11460 () | 2361209..2361460 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL118_RS11465 () | 2361533..2364004 | - | 2472 | WP_126509209.1 | exonuclease | - |
| EL118_RS11470 () | 2364098..2364289 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| EL118_RS11475 () | 2364286..2364474 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EL118_RS11480 () | 2364961..2365536 | - | 576 | WP_000344954.1 | hypothetical protein | - |
| EL118_RS11485 () | 2365538..2365693 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| EL118_RS11490 () | 2365886..2366293 | - | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| EL118_RS11495 () | 2366371..2366598 | + | 228 | WP_000476993.1 | transcriptional regulator | - |
| EL118_RS11500 () | 2366582..2367103 | + | 522 | WP_000705349.1 | hypothetical protein | - |
| EL118_RS11505 () | 2367084..2368049 | + | 966 | WP_126509210.1 | hypothetical protein | - |
| EL118_RS11510 () | 2368090..2368509 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| EL118_RS11515 () | 2368543..2369883 | + | 1341 | WP_000589012.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL118_RS11520 () | 2370320..2370652 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| EL118_RS11525 () | 2370855..2371160 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL118_RS11530 () | 2371185..2371424 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL118_RS11535 () | 2371424..2371711 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL118_RS11540 () | 2371783..2371938 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL118_RS11545 () | 2372155..2372406 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EL118_RS11550 () | 2372473..2372751 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EL118_RS11555 () | 2372753..2373802 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL118_RS11560 () | 2373816..2374568 | + | 753 | WP_001047135.1 | antitermination protein | - |
| EL118_RS11565 () | 2374846..2374935 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL118_RS11570 () | 2374990..2375202 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL118_RS11575 () | 2375503..2375718 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL118_RS24365 () | 2376082..2376252 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| EL118_RS11580 () | 2376472..2376687 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL118_RS11585 () | 2376692..2377003 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| EL118_RS11590 () | 2377000..2377533 | + | 534 | WP_001092971.1 | lysozyme | - |
| EL118_RS11595 () | 2377530..2378026 | + | 497 | Protein_2246 | DUF2514 domain-containing protein | - |
| EL118_RS11600 () | 2378390..2378602 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL118_RS11605 () | 2378613..2378801 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EL118_RS11610 () | 2378804..2378869 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| EL118_RS11615 () | 2378949..2379104 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EL118_RS11620 () | 2379276..2379449 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL118_RS11625 () | 2379601..2380011 | - | 411 | WP_000035574.1 | DUF1398 domain-containing protein | - |
| EL118_RS11630 () | 2380312..2380518 | + | 207 | WP_001031431.1 | hypothetical protein | - |
| EL118_RS11635 () | 2381079..2381618 | + | 540 | WP_000421825.1 | DUF1441 family protein | - |
| EL118_RS11640 () | 2381627..2383726 | + | 2100 | WP_001774468.1 | phage terminase large subunit family protein | - |
| EL118_RS11645 () | 2383723..2383935 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| EL118_RS11650 () | 2383863..2385443 | + | 1581 | WP_011478361.1 | phage portal protein | - |
| EL118_RS11655 () | 2385388..2387414 | + | 2027 | Protein_2258 | ATP-dependent Clp protease proteolytic subunit | VF |
| EL118_RS11660 () | 2387501..2387824 | + | 324 | WP_001097050.1 | DUF2190 family protein | - |
| EL118_RS11665 () | 2387817..2388092 | + | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| EL118_RS11670 () | 2388104..2388682 | + | 579 | WP_020219021.1 | phage tail protein | - |
| EL118_RS11675 () | 2388679..2389080 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| EL118_RS11680 () | 2389092..2389835 | + | 744 | WP_000211109.1 | phage tail protein | - |
| EL118_RS11685 () | 2389896..2390282 | + | 387 | WP_001297778.1 | phage minor tail protein G | - |
| EL118_RS11690 () | 2390291..2390620 | + | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| EL118_RS11695 () | 2390592..2393657 | + | 3066 | WP_126509211.1 | phage tail tape measure protein | - |
| EL118_RS11700 () | 2393657..2393986 | + | 330 | WP_000447253.1 | phage tail protein | - |
| EL118_RS11705 () | 2393996..2394694 | + | 699 | WP_020219025.1 | phage minor tail protein L | - |
| EL118_RS11710 () | 2394699..2395442 | + | 744 | WP_020219026.1 | C40 family peptidase | - |
| EL118_RS11715 () | 2395340..2395987 | + | 648 | WP_023277304.1 | tail assembly protein | - |
| EL118_RS11720 () | 2396048..2399446 | + | 3399 | WP_126509212.1 | host specificity protein J | - |
| EL118_RS11725 () | 2399513..2400112 | + | 600 | WP_001230352.1 | Outer membrane protein X | VF |
| EL118_RS11730 () | 2400177..2403200 | + | 3024 | WP_126509213.1 | prophage tail fiber N-terminal domain-containing protein | - |
| EL118_RS11735 () | 2403200..2403775 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| EL118_RS11740 () | 2403873..2404463 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL118_RS11745 () | 2404781..2405014 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL118_RS11750 () | 2405083..2405196 | - | 114 | WP_122985608.1 | hypothetical protein | - |
| EL118_RS11755 () | 2405801..2407084 | + | 1284 | Protein_2278 | MHS family MFS transporter YdfJ | - |
| EL118_RS11760 () | 2407173..2408633 | + | 1461 | WP_023281233.1 | mannitol dehydrogenase family protein | - |
| EL118_RS11765 () | 2408669..2408872 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL118_RS11770 () | 2409049..2409735 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL118_RS11775 () | 2409824..2410570 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| EL118_RS11780 () | 2410707..2412752 | + | 2046 | WP_001515364.1 | peptidyl-dipeptidase Dcp | - |
| EL118_RS11785 () | 2412796..2413314 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EL118_RS11790 () | 2413590..2413982 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|