MGE detailed information
MGE type: Prophage MGE length: 50254 bp
Accession: NZ_LR134227 Location: 656370..706623 Organism: Escherichia coli strain NCTC9102 Replicon: chromosome
Accession: NZ_LR134227 Location: 656370..706623 Organism: Escherichia coli strain NCTC9102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL093_RS03155 () | 651519..654611 | - | 3093 | WP_001082856.1 | beta-galactosidase subunit alpha | - |
| EL093_RS03160 () | 654795..655778 | - | 984 | WP_000212475.1 | transcriptional regulator EbgR | - |
| EL093_RS03165 () | 655996..656328 | + | 333 | WP_000450594.1 | tRNA-binding protein | - |
| EL093_RS03170 () | 656370..657749 | - | 1380 | WP_001301395.1 | hypothetical protein | VF |
| EL093_RS03175 () | 658167..659687 | + | 1521 | WP_000094721.1 | hypothetical protein | VF |
| EL093_RS03180 () | 659841..660464 | - | 624 | WP_000018003.1 | DNA-binding transcriptional regulator NfeR | - |
| EL093_RS03185 () | 660752..661516 | + | 765 | WP_001066494.1 | NADPH-dependent ferric chelate reductase | - |
| EL093_RS03190 () | 661813..663129 | + | 1317 | WP_000290292.1 | hypothetical protein ; Integrase | Integrase |
| EL093_RS03195 () | 663259..663855 | + | 597 | WP_126322961.1 | hypothetical protein | - |
| EL093_RS03200 () | 663938..665542 | - | 1605 | WP_126322963.1 | hypothetical protein | - |
| EL093_RS03205 () | 666321..666548 | + | 228 | WP_000265818.1 | AlpA family phage regulatory protein | - |
| EL093_RS03210 () | 666611..667357 | + | 747 | WP_126322965.1 | hypothetical protein | - |
| EL093_RS03215 () | 667638..668138 | + | 501 | WP_001372617.1 | hypothetical protein | - |
| EL093_RS03220 () | 668528..669142 | + | 615 | WP_126322967.1 | inovirus Gp2 family protein | - |
| EL093_RS03225 () | 669305..669736 | + | 432 | WP_197718860.1 | inovirus-type Gp2 protein | - |
| EL093_RS03230 () | 669844..670004 | - | 161 | Protein_633 | IS3 family transposase | - |
| EL093_RS03235 () | 670068..670292 | + | 225 | WP_126322970.1 | hypothetical protein | - |
| EL093_RS03240 () | 670303..671100 | - | 798 | WP_126323182.1 | IS21 family transposase IS21 | Transposase |
| EL093_RS03245 () | 671100..672272 | - | 1173 | WP_126322972.1 | IS21 family transposase IS21 | Transposase |
| EL093_RS03250 () | 672373..672519 | + | 147 | Protein_637 | DNA repair protein | - |
| EL093_RS03255 () | 672728..672925 | - | 198 | Protein_638 | IS3 family transposase ISKpn37 | Transposase |
| EL093_RS03260 () | 673217..673768 | + | 552 | WP_126322976.1 | hypothetical protein | VF |
| EL093_RS03265 () | 673765..674607 | - | 843 | WP_126322979.1 | hypothetical protein | VF |
| EL093_RS03270 () | 674758..675357 | + | 600 | WP_126322981.1 | hypothetical protein | VF |
| EL093_RS03275 () | 675784..676248 | + | 465 | WP_001115167.1 | CaiF/GrlA family transcriptional regulator | - |
| EL093_RS03280 () | 676245..676862 | + | 618 | WP_000809340.1 | hypothetical protein | VF |
| EL093_RS03285 () | 677184..678404 | + | 1221 | WP_126322983.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| EL093_RS03290 () | 678397..679719 | + | 1323 | Protein_645 | hypothetical protein | VF |
| EL093_RS03295 () | 680188..680957 | + | 770 | Protein_646 | autotransporter adhesin family protein | - |
| EL093_RS03300 () | 680956..681450 | + | 495 | Protein_647 | DUF932 domain-containing protein | - |
| EL093_RS03305 () | 681542..682027 | + | 486 | WP_126322989.1 | antirestriction protein | - |
| EL093_RS03310 () | 682043..682519 | + | 477 | WP_126322991.1 | RadC family protein | - |
| EL093_RS03315 () | 682588..682809 | + | 222 | WP_089570377.1 | DUF987 domain-containing protein | - |
| EL093_RS03320 () | 682888..683256 | + | 369 | WP_126323184.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EL093_RS03325 () | 683346..683723 | + | 378 | WP_126322993.1 | TA system toxin CbtA family protein | Toxin Detail |
| EL093_RS03330 () | 683720..684208 | + | 489 | WP_089616157.1 | hypothetical protein | - |
| EL093_RS03335 () | 684220..684417 | + | 198 | WP_126322995.1 | DUF957 domain-containing protein | - |
| EL093_RS03340 () | 684514..685359 | + | 846 | WP_126323185.1 | DUF4942 domain-containing protein | - |
| EL093_RS03350 () | 685659..686165 | + | 507 | WP_000228937.1 | G/U mismatch-specific DNA glycosylase | - |
| EL093_RS03355 () | 686244..688086 | - | 1843 | Protein_657 | RNA polymerase sigma factor RpoD | - |
| EL093_RS03360 () | 688281..690026 | - | 1746 | WP_000918827.1 | DNA primase | - |
| EL093_RS03365 () | 690137..690352 | - | 216 | WP_001144069.1 | 30S ribosomal protein S21 | - |
| EL093_RS03370 () | 690590..691603 | + | 1014 | WP_001264352.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| EL093_RS03375 () | 691646..693109 | - | 1464 | WP_000804973.1 | L-tartrate/succinate antiporter | - |
| EL093_RS03380 () | 693157..693762 | - | 606 | WP_000722957.1 | L(+)-tartrate dehydratase subunit beta | - |
| EL093_RS03385 () | 693759..694670 | - | 912 | WP_000986797.1 | L(+)-tartrate dehydratase subunit alpha | - |
| EL093_RS03390 () | 694877..695473 | + | 597 | Protein_664 | DNA-binding transcriptional activator TtdR | - |
| EL093_RS03395 () | 695564..696261 | + | 698 | Protein_665 | IS1 family transposase IS1R | Transposase |
| EL093_RS03400 () | 696278..696619 | + | 342 | Protein_666 | DNA-binding transcriptional activator TtdR | - |
| EL093_RS03405 () | 696632..697249 | - | 618 | WP_001272796.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| EL093_RS03410 () | 697354..697722 | + | 369 | WP_001295541.1 | bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase | - |
| EL093_RS03415 () | 697812..698633 | + | 822 | WP_001281927.1 | undecaprenyl-diphosphate phosphatase | - |
| EL093_RS03420 () | 698814..700052 | - | 1239 | WP_000708487.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| EL093_RS03425 () | 700116..700736 | - | 621 | WP_001125331.1 | SH3 domain-containing protein | - |
| EL093_RS03430 () | 700978..702279 | + | 1302 | WP_000046281.1 | inorganic triphosphatase | - |
| EL093_RS03435 () | 702302..705142 | + | 2841 | WP_126322999.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| EL093_RS03440 () | 705190..706623 | + | 1434 | WP_000869178.1 | hypothetical protein | VF |
| - () | 706703..706844 | + | 142 | NuclAT_5 | - | - |
| - () | 706703..706844 | + | 142 | NuclAT_5 | - | - |
| - () | 706703..706844 | + | 142 | NuclAT_5 | - | - |
| - () | 706703..706844 | + | 142 | NuclAT_5 | - | - |
| EL093_RS03445 () | 706743..706802 | - | 60 | WP_001387082.1 | type I toxin-antitoxin system Ibs family toxin | - |
| - () | 707078..707219 | + | 142 | NuclAT_6 | - | - |
| - () | 707078..707219 | + | 142 | NuclAT_6 | - | - |
| - () | 707078..707219 | + | 142 | NuclAT_6 | - | - |
| - () | 707078..707219 | + | 142 | NuclAT_6 | - | - |
| - () | 707078..707219 | + | 142 | NuclAT_7 | - | - |
| - () | 707078..707219 | + | 142 | NuclAT_7 | - | - |
| - () | 707078..707219 | + | 142 | NuclAT_7 | - | - |
| - () | 707078..707219 | + | 142 | NuclAT_7 | - | - |
| EL093_RS03450 () | 707118..707177 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| EL093_RS03455 () | 707416..709077 | - | 1662 | WP_000341043.1 | flotillin family protein | - |
| EL093_RS03460 () | 709104..709733 | - | 630 | WP_000599942.1 | DUF1449 family protein | - |
| EL093_RS03465 () | 710002..710202 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| EL093_RS03470 () | 710245..711309 | - | 1065 | WP_032161231.1 | fimbrial protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|