MGE detailed information
MGE type: Prophage MGE length: 39330 bp
Accession: NZ_LR134227 Location: 2221238..2260567 Organism: Escherichia coli strain NCTC9102 Replicon: chromosome
Accession: NZ_LR134227 Location: 2221238..2260567 Organism: Escherichia coli strain NCTC9102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL093_RS10745 () | 2217487..2219913 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| EL093_RS10750 () | 2220112..2220417 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL093_RS10755 () | 2220525..2221235 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL093_RS10760 () | 2221238..2221798 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL093_RS10765 () | 2221833..2222174 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL093_RS10770 () | 2222309..2222659 | + | 351 | WP_000598291.1 | YnfA family protein | - |
| EL093_RS10775 () | 2222840..2224054 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| EL093_RS10780 () | 2224066..2225085 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL093_RS10790 () | 2225273..2226553 | - | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| EL093_RS10795 () | 2226588..2226839 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL093_RS10800 () | 2226912..2229383 | - | 2472 | WP_000048342.1 | exonuclease | - |
| EL093_RS10805 () | 2229476..2229667 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| EL093_RS10810 () | 2229664..2229852 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| EL093_RS10820 () | 2230420..2230638 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| EL093_RS10825 () | 2230798..2230953 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| EL093_RS10830 () | 2231120..2231527 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| EL093_RS10835 () | 2231611..2231703 | + | 93 | Protein_2101 | dicB transcriptional regulator DicC | - |
| EL093_RS22285 () | 2231697..2231906 | + | 210 | Protein_2102 | integrase core domain-containing protein | - |
| EL093_RS22290 () | 2232225..2232374 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL093_RS10845 () | 2232811..2233143 | - | 333 | WP_001301033.1 | protein FlxA | - |
| EL093_RS10850 () | 2233346..2233651 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL093_RS10855 () | 2233676..2233915 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL093_RS10860 () | 2233915..2234202 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL093_RS10865 () | 2234274..2234429 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL093_RS10870 () | 2234712..2235362 | + | 651 | Protein_2109 | antitermination protein | - |
| EL093_RS10875 () | 2235640..2235729 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL093_RS10880 () | 2235784..2235996 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL093_RS10885 () | 2236297..2236512 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL093_RS22425 () | 2236876..2237046 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL093_RS10890 () | 2237266..2237397 | + | 132 | Protein_2114 | holin | - |
| EL093_RS10895 () | 2237390..2238025 | - | 636 | Protein_2115 | phage portal protein | - |
| EL093_RS10900 () | 2238022..2238228 | - | 207 | WP_000198149.1 | gpW family protein | - |
| EL093_RS10905 () | 2238225..2238668 | - | 444 | Protein_2117 | phage terminase large subunit family protein | - |
| EL093_RS10910 () | 2238668..2239225 | + | 558 | Protein_2118 | hypothetical protein | - |
| EL093_RS10915 () | 2239225..2239801 | + | 577 | Protein_2119 | tail fiber assembly protein | - |
| EL093_RS10920 () | 2239899..2240489 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL093_RS10925 () | 2240806..2241039 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL093_RS10930 () | 2241108..2241221 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EL093_RS10935 () | 2241742..2243109 | + | 1368 | Protein_2123 | MHS family MFS transporter | - |
| EL093_RS10940 () | 2243198..2244658 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| EL093_RS10945 () | 2244693..2244896 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL093_RS10950 () | 2245073..2245759 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL093_RS10955 () | 2245848..2246594 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| EL093_RS10960 () | 2246731..2248776 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| EL093_RS10965 () | 2248820..2249338 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| EL093_RS10970 () | 2249614..2250006 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| EL093_RS10975 () | 2250261..2251082 | + | 822 | WP_023568446.1 | diguanylate cyclase DgcZ | - |
| EL093_RS10980 () | 2251145..2252307 | + | 1163 | WP_126323058.1 | IS3 family transposase IS3 | Transposase |
| EL093_RS22430 () | 2252527..2252631 | - | 105 | WP_211180496.1 | protein MgtT | - |
| EL093_RS10985 () | 2252631..2252726 | - | 96 | WP_000901367.1 | protein MgtS | - |
| EL093_RS10990 () | 2252853..2254040 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| EL093_RS10995 () | 2254235..2255133 | + | 899 | Protein_2136 | O-acetylserine/cysteine exporter | - |
| EL093_RS11000 () | 2255164..2255382 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| EL093_RS11005 () | 2255414..2255797 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| EL093_RS11010 () | 2255817..2256251 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| EL093_RS11015 () | 2256463..2257128 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| EL093_RS11020 () | 2257153..2258343 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| EL093_RS11025 () | 2258493..2259608 | - | 1116 | WP_126323060.1 | putative protein YneK | - |
| EL093_RS11030 () | 2259686..2260567 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| EL093_RS11035 () | 2260668..2262056 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| EL093_RS11040 () | 2262120..2263046 | + | 927 | WP_000257409.1 | glutaminase B | - |
| EL093_RS11045 () | 2263046..2263405 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| EL093_RS11050 () | 2263478..2264464 | + | 987 | Protein_2147 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|