MGE detailed information
MGE type: Genomic_island MGE length: 40834 bp
Accession: NZ_LR134220 Location: 1138092..1178925 Organism: Escherichia coli strain NCTC11121 Replicon: chromosome
Accession: NZ_LR134220 Location: 1138092..1178925 Organism: Escherichia coli strain NCTC11121 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL088_RS05515 () | 1133571..1134839 | - | 1269 | WP_111724570.1 | L-2-hydroxyglutarate oxidase | - |
| EL088_RS05520 () | 1134858..1135835 | - | 978 | WP_001315804.1 | carbon starvation induced protein CsiD | - |
| EL088_RS05525 () | 1136172..1138424 | - | 2253 | Protein_1076 | alpha-amylase family protein | - |
| EL088_RS05540 () | 1139809..1141182 | + | 1374 | Protein_1077 | DUF5507 domain-containing protein | - |
| EL088_RS05545 () | 1141611..1141754 | + | 144 | WP_000264671.1 | hypothetical protein | - |
| EL088_RS05550 () | 1141909..1142028 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| EL088_RS05555 () | 1142093..1146673 | + | 4581 | WP_111724795.1 | putative autotransporter | VF |
| EL088_RS05560 () | 1147037..1147366 | - | 330 | WP_001618791.1 | TA system toxin CbtA family protein | Toxin Detail |
| EL088_RS05565 () | 1147387..1147704 | - | 318 | WP_001618790.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EL088_RS05570 () | 1147723..1147944 | - | 222 | WP_044864853.1 | DUF987 domain-containing protein | - |
| EL088_RS05575 () | 1147953..1148429 | - | 477 | WP_000811693.1 | RadC family protein | - |
| EL088_RS05580 () | 1148445..1148903 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| EL088_RS05585 () | 1149001..1149240 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| EL088_RS05590 () | 1149317..1149784 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| EL088_RS05595 () | 1149807..1150250 | - | 444 | WP_032199444.1 | hypothetical protein | - |
| EL088_RS05600 () | 1150250..1150486 | - | 237 | WP_001144031.1 | hypothetical protein | - |
| EL088_RS05605 () | 1150527..1151228 | - | 702 | WP_111724571.1 | WYL domain-containing protein | - |
| EL088_RS05610 () | 1151445..1152266 | - | 822 | WP_111724572.1 | DUF945 domain-containing protein | - |
| EL088_RS05615 () | 1152358..1153221 | - | 864 | WP_001581464.1 | GTPase family protein | - |
| EL088_RS05620 () | 1153425..1153616 | + | 192 | WP_001581465.1 | IS5 family transposase ISSgl1 | Transposase |
| EL088_RS05625 () | 1153665..1154354 | - | 690 | Protein_1094 | IS1 family transposase | - |
| EL088_RS05630 () | 1154612..1156165 | - | 1554 | WP_111724573.1 | L-lactate permease | - |
| EL088_RS05635 () | 1156601..1158297 | + | 1697 | Protein_1096 | D-lactate dehydrogenase | - |
| EL088_RS05640 () | 1158372..1159091 | + | 720 | WP_001102105.1 | (Fe-S)-binding protein | - |
| EL088_RS05645 () | 1159102..1160529 | + | 1428 | WP_000023896.1 | iron-sulfur cluster-binding protein | - |
| EL088_RS05650 () | 1160522..1161217 | + | 696 | WP_000370411.1 | lactate utilization protein C | - |
| EL088_RS05655 () | 1161267..1161680 | - | 414 | Protein_1100 | gluconate permease | - |
| EL088_RS05660 () | 1161930..1162910 | + | 981 | WP_111724574.1 | IS5 family transposase ISKpn26 | Transposase |
| EL088_RS05665 () | 1163060..1163293 | - | 234 | Protein_1102 | dihydrodipicolinate synthase family protein | - |
| EL088_RS05670 () | 1163314..1164009 | - | 696 | WP_111724575.1 | B3/4 domain-containing protein | - |
| EL088_RS05675 () | 1164053..1164655 | + | 603 | WP_001581470.1 | helix-turn-helix domain-containing protein | - |
| EL088_RS05680 () | 1164718..1165179 | + | 462 | WP_019077728.1 | GNAT family N-acetyltransferase | - |
| EL088_RS05685 () | 1165448..1167157 | + | 1710 | WP_045269866.1 | type I restriction-modification system subunit M | - |
| EL088_RS05690 () | 1167147..1168592 | + | 1446 | WP_111724576.1 | restriction endonuclease subunit S | - |
| EL088_RS05695 () | 1168585..1169772 | + | 1188 | WP_111724577.1 | DUF4268 domain-containing protein | - |
| EL088_RS05700 () | 1169772..1172903 | + | 3132 | WP_032180906.1 | type I restriction endonuclease subunit R | - |
| EL088_RS05705 () | 1172938..1173432 | + | 495 | WP_006809979.1 | hypothetical protein | - |
| EL088_RS05710 () | 1173505..1174131 | - | 627 | WP_001618771.1 | inovirus Gp2 family protein | - |
| EL088_RS05715 () | 1174262..1175677 | - | 1416 | WP_126320707.1 | DUF3987 domain-containing protein | - |
| EL088_RS05720 () | 1175804..1176016 | - | 213 | WP_001618769.1 | AlpA family transcriptional regulator | - |
| EL088_RS05725 () | 1176142..1177020 | + | 879 | WP_111724578.1 | hypothetical protein | - |
| EL088_RS05730 () | 1177079..1178320 | - | 1242 | WP_001515695.1 | Prophage integrase IntA ; Integrase | Integrase |
| EL088_RS05740 () | 1179101..1179583 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| EL088_RS05745 () | 1179754..1180191 | + | 438 | WP_001341638.1 | type II toxin-antitoxin system toxin RatA | - |
| EL088_RS05750 () | 1180181..1180471 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| EL088_RS05755 () | 1180533..1180874 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| EL088_RS05760 () | 1181023..1182684 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| EL088_RS05765 () | 1182770..1183648 | - | 879 | WP_032083618.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|