NZ_LR1342162319575..2332384

MGE detailed information

MGE type: Genomic_island        MGE length: 12810 bp
Accession: NZ_LR134216        Location: 2319575..2332384         Organism: Escherichia coli strain NCTC10973       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EL103_RS11325 () 2319575..2319841 + 267 WP_001301023.1 type II toxin-antitoxin system antitoxin HipB Antitoxin Detail
EL103_RS11330 () 2319841..2321163 + 1323 WP_001125439.1 type II toxin-antitoxin system serine/threonine protein kinase toxin HipA Toxin Detail
EL103_RS11335 () 2321475..2321683 + 209 Protein_2198 AraC family transcriptional regulator -
EL103_RS11340 () 2321938..2323164 + 1227 Protein_2199 Outer membrane usher protein FimD VF
EL103_RS11345 () 2323178..2323708 + 531 WP_000876763.1 Protein FimF VF
EL103_RS11350 () 2323721..2324224 + 504 WP_126508817.1 Protein FimG VF
EL103_RS11355 () 2324283..2325197 + 915 WP_000520676.1 Type 1 fimbrin D-mannose specific adhesin VF
EL103_RS11360 () 2325531..2327810 + 2280 WP_000726691.1 acid resistance putative oxidoreductase YdeP -
EL103_RS11365 () 2328058..2328255 + 198 WP_000543384.1 two-component system connector SafA -
EL103_RS11370 () 2328330..2329091 + 762 WP_000060492.1 acid stress response transcriptional regulator YdeO -
EL103_RS11375 () 2329493..2331175 + 1683 WP_001295684.1 sulfatase -
EL103_RS11380 () 2331227..2332384 + 1158 WP_001301030.1 anaerobic sulfatase maturase -
EL103_RS11385 () 2332350..2332472 - 123 WP_120795387.1 protein YneP -
EL103_RS22650 () 2332675..2334360 + 1686 Protein_2209 ABC transporter ATP-binding protein/permease -
EL103_RS11400 () 2334398..2336770 + 2373 WP_000832437.1 TonB-dependent receptor plug domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli K-12 strain ER3413 Genomic island TA20025 CP009789 1561271..1572871 0.003
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20066 HG738867 1469371..1480971 0.003
Escherichia coli str. K-12 substr. MG1655 Genomic island TA1040 NC_000913 1580842..1592442 0.003
Escherichia coli str. K-12 substr. W3110 Genomic island TA21437 NC_007779 1582556..1594156 0.003
Escherichia coli HS Genomic island TA22421 NC_009800 1597665..1609265 0.005
Escherichia coli str. K-12 substr. DH10B Genomic island TA22685 NC_010473 1669461..1680091 0.006
Escherichia coli BW2952 Genomic island TA23853 NC_012759 1470925..1482525 0.003
Escherichia coli DH1 Genomic island TA27403 NC_017638 1563024..1574624 0.003
Escherichia coli str. K-12 substr. MDS42 Genomic island TA29002 NC_020518 1287669..1299269 0.003
Escherichia coli BW25113 Genomic island TA48682 NZ_CP009273 1575099..1586699 0.003
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68424 NZ_CP017979 1484612..1496212 0.003
Escherichia coli strain DH5alpha Genomic island TA90478 NZ_CP025520 438284..449884 0.004
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285016 NZ_HG738867 1469371..1480971 0.003