MGE detailed information
MGE type: Prophage MGE length: 54639 bp
Accession: NZ_LR134214 Location: 1946083..2000721 Organism: Citrobacter portucalensis strain NCTC11104 Replicon: chromosome
Accession: NZ_LR134214 Location: 1946083..2000721 Organism: Citrobacter portucalensis strain NCTC11104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL073_RS09605 () | 1942481..1943122 | + | 642 | WP_126317826.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EL073_RS09610 () | 1943190..1944368 | - | 1179 | WP_003833812.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EL073_RS09615 () | 1944501..1944791 | + | 291 | WP_126317827.1 | DNA damage-inducible protein YebG | - |
| EL073_RS09620 () | 1944913..1945266 | + | 354 | WP_126317828.1 | protein YebF | - |
| EL073_RS09625 () | 1945361..1946020 | + | 660 | WP_126317829.1 | tellurite resistance TerB family protein | - |
| EL073_RS09630 () | 1946107..1948161 | + | 2055 | WP_186336565.1 | oligopeptidase B | - |
| EL073_RS09635 () | 1948152..1948814 | - | 663 | WP_003833802.1 | exodeoxyribonuclease X | - |
| EL073_RS09640 () | 1948838..1949494 | - | 657 | WP_003833801.1 | carbon-nitrogen hydrolase family protein | - |
| EL073_RS09645 () | 1949601..1949831 | - | 231 | WP_003833800.1 | DNA polymerase III subunit theta | - |
| EL073_RS09650 () | 1949975..1950349 | + | 375 | WP_003833799.1 | CopC domain-containing protein YobA | - |
| EL073_RS09655 () | 1950353..1951225 | + | 873 | WP_008785042.1 | copper homeostasis membrane protein CopD | - |
| EL073_RS09660 () | 1951246..1951584 | + | 339 | WP_003833793.1 | YebY family protein | - |
| - () | 1951705..1951848 | - | 144 | - | - | Antitoxin Detail |
| - () | 1951740..1951843 | + | 104 | - | - | Toxin Detail |
| EL073_RS09665 () | 1951921..1953006 | - | 1086 | WP_065944794.1 | hypothetical protein ; Integrase | Integrase |
| EL073_RS09670 () | 1952975..1953247 | - | 273 | WP_126317831.1 | excisionase | - |
| EL073_RS09675 () | 1953312..1953554 | - | 243 | WP_047415379.1 | DUF4060 family protein | - |
| EL073_RS09680 () | 1953594..1954634 | - | 1041 | WP_126317832.1 | recombinase RecT | - |
| EL073_RS09685 () | 1954649..1957969 | - | 3321 | WP_126317833.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| EL073_RS23030 () | 1958109..1958270 | - | 162 | WP_061360104.1 | hypothetical protein | - |
| EL073_RS09690 () | 1958282..1958488 | - | 207 | WP_126319788.1 | cell division inhibitor protein | - |
| EL073_RS09695 () | 1958865..1959059 | + | 195 | WP_032238386.1 | hypothetical protein | - |
| EL073_RS09700 () | 1959088..1959906 | - | 819 | WP_126317834.1 | DUF3037 domain-containing protein | - |
| EL073_RS09705 () | 1959903..1960640 | - | 738 | WP_126317835.1 | hypothetical protein | - |
| EL073_RS22985 () | 1960742..1960840 | - | 99 | WP_182317033.1 | YoaK family small membrane protein | - |
| EL073_RS09710 () | 1960885..1961271 | - | 387 | WP_038641083.1 | helix-turn-helix domain-containing protein | - |
| EL073_RS09715 () | 1961375..1961608 | + | 234 | WP_038641081.1 | helix-turn-helix domain-containing protein | - |
| EL073_RS09720 () | 1961611..1962150 | + | 540 | WP_126317836.1 | toxin YdaT domain-containing protein | - |
| EL073_RS09725 () | 1962318..1963265 | + | 948 | WP_126317837.1 | hypothetical protein | - |
| EL073_RS09730 () | 1963268..1964017 | + | 750 | WP_126317838.1 | ATP-binding protein | - |
| EL073_RS09735 () | 1964036..1964347 | + | 312 | WP_126317839.1 | hypothetical protein | - |
| EL073_RS09740 () | 1964344..1964610 | + | 267 | Protein_1860 | hypothetical protein | - |
| EL073_RS09745 () | 1964730..1965710 | + | 981 | WP_126317840.1 | IS5 family transposase ISVch9 | Transposase |
| EL073_RS23035 () | 1965976..1966116 | + | 141 | WP_186336566.1 | hypothetical protein | - |
| EL073_RS09750 () | 1966113..1966484 | + | 372 | WP_126317841.1 | hypothetical protein | - |
| EL073_RS09755 () | 1966486..1967241 | + | 756 | WP_126317842.1 | hypothetical protein | - |
| EL073_RS23095 () | 1967561..1968100 | + | 540 | WP_171859136.1 | DUF551 domain-containing protein | - |
| EL073_RS09765 () | 1968329..1968586 | + | 258 | WP_016156704.1 | hypothetical protein | - |
| EL073_RS09770 () | 1968661..1968876 | + | 216 | Protein_1867 | DNA cytosine methyltransferase | - |
| EL073_RS09775 () | 1969022..1969255 | + | 234 | WP_016236996.1 | DinI family protein | - |
| EL073_RS09780 () | 1969373..1969621 | + | 249 | WP_001568777.1 | hypothetical protein | - |
| EL073_RS09785 () | 1969656..1970255 | + | 600 | WP_060683710.1 | DUF1367 family protein | - |
| EL073_RS09790 () | 1970375..1970998 | + | 624 | WP_126319790.1 | recombination protein NinG | - |
| EL073_RS09795 () | 1970995..1971135 | + | 141 | WP_001568781.1 | YlcG family protein | - |
| EL073_RS09800 () | 1971132..1971962 | + | 831 | WP_057064561.1 | antitermination protein | - |
| EL073_RS09805 () | 1972382..1972660 | + | 279 | WP_016150496.1 | hypothetical protein | - |
| EL073_RS09810 () | 1972632..1973180 | + | 549 | WP_126317843.1 | lysozyme | - |
| EL073_RS09815 () | 1973177..1973692 | + | 516 | WP_060683646.1 | DUF2514 domain-containing protein | - |
| EL073_RS09820 () | 1974166..1974369 | + | 204 | WP_126317844.1 | hypothetical protein | - |
| EL073_RS09825 () | 1974620..1975111 | + | 492 | WP_008784471.1 | DUF1441 family protein | - |
| EL073_RS09830 () | 1975111..1977213 | + | 2103 | WP_125363797.1 | phage terminase large subunit family protein | - |
| EL073_RS09835 () | 1977210..1977425 | + | 216 | WP_125363798.1 | hypothetical protein | - |
| EL073_RS09840 () | 1977422..1978930 | + | 1509 | WP_044700357.1 | phage portal protein | - |
| EL073_RS09845 () | 1978857..1980887 | + | 2031 | WP_185757642.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| EL073_RS09850 () | 1980979..1981305 | + | 327 | WP_008784475.1 | DUF2190 family protein | - |
| EL073_RS09855 () | 1981298..1981573 | + | 276 | WP_125363800.1 | ATP-binding protein | - |
| EL073_RS09860 () | 1981586..1982140 | + | 555 | WP_008784477.1 | phage tail protein | - |
| EL073_RS09865 () | 1982137..1982535 | + | 399 | WP_125363801.1 | phage tail protein | - |
| EL073_RS09870 () | 1982543..1983280 | + | 738 | WP_048231668.1 | Ig-like domain-containing protein | - |
| EL073_RS09875 () | 1983317..1983724 | + | 408 | WP_008784480.1 | phage minor tail protein G | - |
| EL073_RS09880 () | 1983733..1984053 | + | 321 | WP_071524448.1 | phage tail assembly protein T | - |
| EL073_RS09885 () | 1984031..1986547 | + | 2517 | WP_126317845.1 | phage tail tape measure protein | - |
| EL073_RS09890 () | 1986551..1986898 | + | 348 | WP_126317846.1 | phage tail protein | - |
| EL073_RS09895 () | 1986895..1987650 | + | 756 | WP_125363804.1 | phage minor tail protein L | - |
| EL073_RS09900 () | 1987652..1988362 | + | 711 | WP_126317847.1 | C40 family peptidase | - |
| EL073_RS09905 () | 1988392..1988802 | + | 411 | WP_043016030.1 | hypothetical protein | - |
| EL073_RS09910 () | 1988857..1989447 | + | 591 | WP_045445162.1 | tail assembly protein | - |
| EL073_RS09915 () | 1989503..1992676 | + | 3174 | WP_125363806.1 | host specificity protein J | - |
| EL073_RS09920 () | 1992922..1993193 | + | 272 | Protein_1897 | hypothetical protein | - |
| EL073_RS09925 () | 1993190..1993828 | + | 639 | WP_126317848.1 | hypothetical protein | - |
| EL073_RS09930 () | 1993901..1995226 | + | 1326 | WP_126317849.1 | phage tail protein | - |
| EL073_RS09935 () | 1995362..1995600 | - | 239 | Protein_1900 | DinI-like family protein | - |
| EL073_RS09940 () | 1995775..1997334 | + | 1560 | WP_126317850.1 | putative cyclic di-GMP phosphodiesterase PdeB | VF |
| EL073_RS09950 () | 1998027..1998668 | + | 642 | WP_003833791.1 | protein-serine/threonine phosphatase | - |
| EL073_RS09955 () | 1998669..1998860 | - | 192 | WP_003034941.1 | YebW family protein | - |
| EL073_RS09960 () | 1998963..1999199 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| EL073_RS09965 () | 1999300..2000688 | - | 1389 | WP_197718053.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EL073_RS09970 () | 2000804..2003437 | - | 2634 | WP_126317852.1 | PqiB family protein | - |
| EL073_RS09975 () | 2003406..2004689 | - | 1284 | WP_003833783.1 | membrane integrity lipid transport subunit YebS | - |
| EL073_RS09980 () | 2004818..2005315 | + | 498 | WP_126317853.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|