MGE detailed information
MGE type: Prophage MGE length: 85083 bp
Accession: NZ_LR134138 Location: 803144..888226 Organism: Kluyvera intermedia strain NCTC12125 Replicon: chromosome
Accession: NZ_LR134138 Location: 803144..888226 Organism: Kluyvera intermedia strain NCTC12125 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL028_RS03835 () | 798563..799129 | + | 567 | WP_062778476.1 | VOC family protein | - |
| EL028_RS03840 () | 799204..799944 | + | 741 | WP_062778565.1 | copper homeostasis protein CutC | - |
| EL028_RS03845 () | 800197..801165 | - | 969 | WP_062778474.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| EL028_RS03850 () | 801162..801905 | - | 744 | WP_062778472.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| EL028_RS03855 () | 801945..802340 | - | 396 | WP_062778470.1 | MAPEG family protein | - |
| EL028_RS03860 () | 802392..803162 | - | 771 | WP_126440707.1 | DUF72 domain-containing protein | - |
| EL028_RS03865 () | 803144..804457 | - | 1314 | WP_062779699.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EL028_RS03870 () | 804513..804752 | - | 240 | WP_062779701.1 | excisionase family protein | - |
| EL028_RS03875 () | 804749..804973 | - | 225 | WP_062779703.1 | hypothetical protein | - |
| EL028_RS03880 () | 804970..805095 | - | 126 | WP_126440708.1 | sodium:solute symporter | - |
| EL028_RS03885 () | 805092..805670 | - | 579 | WP_062779705.1 | hypothetical protein | - |
| EL028_RS03890 () | 805670..806509 | - | 840 | WP_062779707.1 | DNA-binding protein | - |
| EL028_RS03895 () | 806521..807027 | - | 507 | WP_062779709.1 | hypothetical protein | - |
| EL028_RS03900 () | 807049..807360 | - | 312 | WP_062779740.1 | hypothetical protein | - |
| EL028_RS03905 () | 807410..807601 | - | 192 | WP_062779711.1 | hypothetical protein | - |
| EL028_RS03910 () | 807708..808094 | - | 387 | WP_062779713.1 | S24 family peptidase | - |
| EL028_RS03915 () | 808164..808457 | - | 294 | WP_062779715.1 | hypothetical protein | - |
| EL028_RS03920 () | 808629..809321 | - | 693 | WP_062779717.1 | helix-turn-helix transcriptional regulator | - |
| EL028_RS03925 () | 809475..809690 | + | 216 | WP_062779742.1 | helix-turn-helix domain-containing protein | - |
| EL028_RS03930 () | 809721..810548 | + | 828 | WP_062779718.1 | transporter | - |
| EL028_RS03935 () | 810980..811363 | + | 384 | Protein_760 | hypothetical protein | - |
| EL028_RS03940 () | 811464..812342 | + | 879 | WP_062779744.1 | IS21 family transposase ISCsa9 | Transposase |
| EL028_RS03945 () | 812339..813694 | + | 1356 | WP_062779722.1 | replicative DNA helicase | - |
| EL028_RS03950 () | 813705..814013 | + | 309 | WP_062779723.1 | hypothetical protein | - |
| EL028_RS03955 () | 814010..814792 | + | 783 | WP_062779725.1 | antitermination protein | - |
| EL028_RS03960 () | 815094..815897 | - | 804 | WP_062779726.1 | DUF3800 domain-containing protein | - |
| EL028_RS03985 () | 816513..816914 | + | 402 | WP_062779728.1 | hypothetical protein | - |
| EL028_RS03990 () | 816911..817192 | + | 282 | WP_062779730.1 | phage holin family protein | - |
| EL028_RS03995 () | 817201..817815 | + | 615 | WP_062779732.1 | glycoside hydrolase family 19 protein | - |
| EL028_RS04000 () | 817812..818036 | + | 225 | WP_062779734.1 | hypothetical protein | - |
| EL028_RS04005 () | 818033..818311 | + | 279 | WP_062779736.1 | hypothetical protein | - |
| EL028_RS23095 () | 818911..819087 | + | 177 | WP_164717394.1 | hypothetical protein | - |
| EL028_RS04020 () | 819099..819695 | + | 597 | WP_062779587.1 | hypothetical protein | - |
| EL028_RS04025 () | 819722..819982 | + | 261 | Protein_773 | hypothetical protein | - |
| EL028_RS04030 () | 820349..820576 | + | 228 | WP_062779627.1 | hypothetical protein | - |
| EL028_RS04035 () | 820952..821512 | + | 561 | WP_082806342.1 | HNH endonuclease | - |
| EL028_RS04040 () | 821512..822972 | + | 1461 | WP_062779590.1 | glycosyltransferase family 2 protein | - |
| EL028_RS04045 () | 822954..823547 | + | 594 | WP_062779592.1 | hypothetical protein | - |
| EL028_RS04050 () | 823540..823890 | + | 351 | WP_073971243.1 | HNH endonuclease | - |
| EL028_RS04055 () | 824047..824544 | + | 498 | WP_062779594.1 | phage terminase small subunit P27 family | - |
| EL028_RS04060 () | 824544..826301 | + | 1758 | WP_062779596.1 | terminase large subunit | - |
| EL028_RS04070 () | 826496..827725 | + | 1230 | WP_062779600.1 | phage portal protein | - |
| EL028_RS04075 () | 827712..828365 | + | 654 | WP_062779602.1 | HK97 family phage prohead protease | - |
| EL028_RS04080 () | 828378..829592 | + | 1215 | WP_062779604.1 | phage major capsid protein | - |
| EL028_RS04085 () | 829634..829945 | + | 312 | WP_062779606.1 | head-tail connector protein | - |
| EL028_RS04090 () | 829955..830293 | + | 339 | WP_062779608.1 | phage head closure protein | - |
| EL028_RS04095 () | 830290..830739 | + | 450 | WP_062779610.1 | HK97 gp10 family phage protein | - |
| EL028_RS04100 () | 830736..831083 | + | 348 | WP_073971244.1 | DUF3168 domain-containing protein | - |
| EL028_RS04105 () | 831143..831586 | + | 444 | WP_062779612.1 | hypothetical protein | - |
| EL028_RS04110 () | 831595..831978 | + | 384 | WP_062779613.1 | phage tail assembly chaperone | - |
| EL028_RS04115 () | 831987..832265 | + | 279 | WP_062779615.1 | DUF4035 domain-containing protein | - |
| EL028_RS04120 () | 832323..832511 | + | 189 | WP_062779616.1 | hypothetical protein | - |
| EL028_RS04125 () | 832553..835807 | + | 3255 | WP_062779618.1 | phage tail tape measure protein | - |
| EL028_RS04130 () | 835810..836148 | + | 339 | WP_062779619.1 | phage tail protein | - |
| EL028_RS04135 () | 836145..836903 | + | 759 | WP_062779621.1 | phage minor tail protein L | - |
| EL028_RS04140 () | 836906..837616 | + | 711 | WP_062779623.1 | C40 family peptidase | - |
| EL028_RS04145 () | 837616..838203 | + | 588 | WP_062779625.1 | tail assembly protein | - |
| EL028_RS04150 () | 838257..841436 | + | 3180 | WP_126440710.1 | host specificity protein J | - |
| EL028_RS04155 () | 841682..841954 | + | 273 | WP_062779912.1 | hypothetical protein | - |
| EL028_RS04160 () | 841951..842589 | + | 639 | WP_062779914.1 | hypothetical protein | - |
| EL028_RS04165 () | 842661..843773 | + | 1113 | WP_126440712.1 | tail fiber domain-containing protein | - |
| EL028_RS23100 () | 843779..843943 | + | 165 | WP_156484230.1 | hypothetical protein | - |
| EL028_RS04180 () | 845098..845664 | - | 567 | WP_062776128.1 | hydrolase | - |
| EL028_RS04185 () | 845931..847718 | + | 1788 | WP_062776131.1 | aspartate--tRNA ligase | - |
| EL028_RS04190 () | 847720..848163 | + | 444 | WP_062776132.1 | dihydroneopterin triphosphate diphosphatase | - |
| EL028_RS04195 () | 848192..848935 | + | 744 | WP_062776134.1 | putative transcriptional regulatory protein YebC | VF |
| EL028_RS04200 () | 848970..849491 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| EL028_RS04205 () | 849573..850184 | + | 612 | WP_062776136.1 | Holliday junction branch migration protein RuvA | - |
| EL028_RS04210 () | 850193..851203 | + | 1011 | WP_062776138.1 | Holliday junction branch migration DNA helicase RuvB | - |
| EL028_RS04215 () | 851370..851822 | + | 453 | WP_062776139.1 | hypothetical protein | - |
| EL028_RS04220 () | 851905..852693 | - | 789 | WP_062776141.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| EL028_RS04225 () | 852690..853445 | - | 756 | WP_062776142.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| EL028_RS04230 () | 853523..854482 | + | 960 | WP_062776144.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| EL028_RS04235 () | 854495..855814 | + | 1320 | WP_062776146.1 | murein DD-endopeptidase MepM | - |
| EL028_RS04240 () | 855946..856923 | + | 978 | WP_062776147.1 | Lipid A biosynthesis myristoyltransferase | VF |
| EL028_RS04245 () | 857062..858504 | - | 1443 | WP_062776150.1 | pyruvate kinase | - |
| EL028_RS04250 () | 858616..859485 | - | 870 | WP_062776151.1 | MurR/RpiR family transcriptional regulator | - |
| EL028_RS04260 () | 859883..861358 | + | 1476 | WP_062776153.1 | glucose-6-phosphate dehydrogenase | - |
| EL028_RS04265 () | 861593..863404 | + | 1812 | WP_062776154.1 | phosphogluconate dehydratase | - |
| EL028_RS04270 () | 863444..864085 | + | 642 | WP_062776156.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| EL028_RS04275 () | 864162..865341 | - | 1180 | Protein_820 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| EL028_RS04280 () | 865523..866164 | + | 642 | WP_062776159.1 | DUF533 domain-containing protein | - |
| EL028_RS04285 () | 866247..868299 | + | 2053 | Protein_822 | oligopeptidase B | - |
| EL028_RS04290 () | 868300..868959 | - | 660 | WP_062776160.1 | exodeoxyribonuclease X | - |
| EL028_RS04295 () | 868983..869651 | - | 669 | WP_062776162.1 | carbon-nitrogen hydrolase family protein | - |
| EL028_RS04300 () | 869740..869970 | - | 231 | WP_062776164.1 | DNA polymerase III subunit theta | - |
| EL028_RS04305 () | 870108..870482 | + | 375 | WP_062776289.1 | CopC domain-containing protein YobA | - |
| EL028_RS04310 () | 870485..871354 | + | 870 | WP_062776166.1 | copper homeostasis membrane protein CopD | - |
| EL028_RS04315 () | 871369..871707 | + | 339 | WP_126441004.1 | YebY family protein | - |
| - () | 871827..871966 | - | 140 | - | - | Antitoxin Detail |
| - () | 871864..871966 | + | 103 | - | - | Toxin Detail |
| EL028_RS04325 () | 872443..873378 | + | 936 | WP_062776168.1 | Lipid A biosynthesis palmitoleoyltransferase | VF |
| EL028_RS04330 () | 873413..873652 | - | 240 | WP_062776169.1 | DUF1480 family protein | - |
| EL028_RS04335 () | 873764..875203 | - | 1440 | Protein_831 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| EL028_RS04340 () | 875283..877918 | - | 2636 | Protein_832 | Intermembrane transport protein YebT | VF |
| EL028_RS04345 () | 877887..879170 | - | 1284 | WP_062776176.1 | membrane integrity lipid transport subunit YebS | - |
| EL028_RS04350 () | 879314..879811 | + | 498 | WP_062776178.1 | GAF domain-containing protein | - |
| EL028_RS04355 () | 879909..880601 | + | 693 | WP_062776180.1 | RNA chaperone ProQ | - |
| EL028_RS04360 () | 880621..882669 | + | 2049 | WP_062776183.1 | carboxy terminal-processing peptidase | - |
| EL028_RS04365 () | 882864..883748 | + | 885 | WP_062776185.1 | protease HtpX | - |
| EL028_RS04370 () | 883787..885160 | - | 1374 | WP_062776187.1 | MFS transporter | - |
| EL028_RS04375 () | 885339..886130 | + | 792 | WP_062776189.1 | DNA-binding transcriptional regulator KdgR | - |
| EL028_RS04380 () | 886178..886417 | - | 240 | WP_062776191.1 | hypothetical protein | - |
| EL028_RS04385 () | 886586..886729 | + | 144 | WP_064544774.1 | PhoP/PhoQ regulator MgrB | - |
| EL028_RS04390 () | 886822..887097 | + | 276 | WP_126440716.1 | YebO family protein | - |
| EL028_RS04395 () | 887858..887974 | + | 117 | WP_073971150.1 | YobF family protein | - |
| EL028_RS04400 () | 888017..888226 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| EL028_RS04405 () | 888397..889194 | + | 798 | WP_062776195.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| EL028_RS04410 () | 889191..889761 | - | 571 | Protein_846 | manganese efflux pump MntP | - |
| EL028_RS04415 () | 890143..890601 | - | 459 | WP_062776199.1 | DUF986 family protein | - |
| EL028_RS04420 () | 890655..891509 | - | 855 | WP_062776201.1 | PTS mannose transporter subunit IID | - |
| EL028_RS04425 () | 891522..892322 | - | 801 | WP_062776203.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|