MGE detailed information
MGE type: Genomic_island MGE length: 58062 bp
Accession: NZ_LR134082 Location: 3638373..3696434 Organism: Escherichia coli strain NCTC9038 Replicon: chromosome
Accession: NZ_LR134082 Location: 3638373..3696434 Organism: Escherichia coli strain NCTC9038 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL018_RS17700 () | 3633719..3634126 | + | 408 | WP_000198515.1 | hypothetical protein | - |
| EL018_RS17705 () | 3634149..3635552 | + | 1404 | WP_000682702.1 | DUF4832 domain-containing protein | - |
| EL018_RS17710 () | 3635600..3636619 | - | 1020 | WP_000154259.1 | UDP-glucose 4-epimerase GalE | - |
| EL018_RS17715 () | 3636696..3637622 | - | 927 | WP_001332888.1 | hypothetical protein | - |
| EL018_RS17720 () | 3637969..3638666 | + | 698 | Protein_3437 | IS1 family transposase | - |
| EL018_RS17725 () | 3638684..3639418 | + | 735 | Protein_3438 | hypothetical protein | - |
| EL018_RS17730 () | 3639405..3639632 | + | 228 | WP_001039069.1 | antitoxin VbhA family protein | - |
| EL018_RS17735 () | 3639838..3641223 | - | 1386 | WP_000378754.1 | hypothetical protein | - |
| EL018_RS17745 () | 3642768..3642980 | - | 213 | WP_000796434.1 | hypothetical protein | - |
| EL018_RS17750 () | 3643135..3643422 | - | 288 | Protein_3443 | DDE-type integrase/transposase/recombinase | - |
| EL018_RS17755 () | 3643439..3644515 | - | 1077 | WP_000227970.1 | IS110 family transposase ISEc21 | Transposase |
| EL018_RS17765 () | 3644797..3645656 | - | 860 | Protein_3445 | IS3-like element ISEc52 family transposase | - |
| EL018_RS17770 () | 3645713..3647071 | - | 1359 | WP_126493629.1 | P-type conjugative transfer protein TrbL | - |
| EL018_RS17775 () | 3647259..3648053 | - | 795 | WP_024220864.1 | P-type conjugative transfer protein TrbJ | - |
| EL018_RS17780 () | 3648135..3648488 | - | 354 | WP_000218773.1 | conjugal transfer transcriptional regulator TraJ | - |
| EL018_RS17785 () | 3648772..3649053 | - | 282 | WP_029380176.1 | hypothetical protein | - |
| EL018_RS17790 () | 3650004..3650261 | + | 258 | WP_071840188.1 | HigA family addiction module antidote protein | - |
| EL018_RS17795 () | 3650316..3652061 | - | 1746 | WP_000470135.1 | DUF2326 domain-containing protein | - |
| EL018_RS17800 () | 3652030..3652281 | - | 252 | WP_196613384.1 | hypothetical protein | - |
| EL018_RS17805 () | 3652250..3653230 | - | 981 | WP_001082070.1 | SMEK domain-containing protein | - |
| EL018_RS17815 () | 3653674..3654927 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| EL018_RS17820 () | 3654939..3656042 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| EL018_RS17825 () | 3656330..3657385 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| EL018_RS17830 () | 3657424..3657825 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| EL018_RS17835 () | 3657883..3659127 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3658543..3658623 | - | 81 | NuclAT_11 | - | - |
| - () | 3658543..3658623 | - | 81 | NuclAT_11 | - | - |
| - () | 3658543..3658623 | - | 81 | NuclAT_11 | - | - |
| - () | 3658543..3658623 | - | 81 | NuclAT_11 | - | - |
| EL018_RS17840 () | 3659219..3659677 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| EL018_RS17845 () | 3659938..3661395 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| EL018_RS17850 () | 3661452..3661973 | - | 522 | Protein_3461 | peptide chain release factor H | - |
| EL018_RS17855 () | 3661969..3662175 | - | 207 | Protein_3462 | RtcB family protein | - |
| EL018_RS17860 () | 3662493..3662945 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| EL018_RS17865 () | 3662955..3663353 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| EL018_RS17870 () | 3663356..3663649 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| EL018_RS17875 () | 3663701..3664756 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| EL018_RS17880 () | 3664827..3665612 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| EL018_RS17885 () | 3665584..3667296 | + | 1713 | Protein_3468 | Flagellar biosynthesis protein FlhA | VF |
| EL018_RS17890 () | 3667520..3668017 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| EL018_RS17895 () | 3668193..3668942 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| EL018_RS17900 () | 3669152..3669412 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| EL018_RS17905 () | 3669415..3669693 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| EL018_RS17910 () | 3669849..3670589 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| EL018_RS17915 () | 3670560..3671327 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| EL018_RS17920 () | 3671533..3672111 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| EL018_RS17925 () | 3672351..3674795 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| EL018_RS17930 () | 3674838..3675284 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| EL018_RS17935 () | 3675465..3676235 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| EL018_RS17940 () | 3676276..3677412 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| EL018_RS22785 () | 3677843..3678019 | - | 177 | WP_021574972.1 | hypothetical protein | - |
| EL018_RS17945 () | 3678016..3678234 | - | 219 | WP_001101841.1 | hypothetical protein | - |
| EL018_RS17950 () | 3678212..3682444 | - | 4233 | WP_126493630.1 | Protein RhsD | VF |
| EL018_RS17955 () | 3682521..3682969 | - | 449 | Protein_3483 | hypothetical protein | - |
| EL018_RS17960 () | 3683040..3684176 | - | 1137 | WP_000420722.1 | ISAs1 family transposase ISEc1 | Transposase |
| EL018_RS17965 () | 3684645..3685022 | - | 378 | WP_001077738.1 | hypothetical protein | - |
| EL018_RS17970 () | 3685022..3686707 | - | 1686 | Protein_3486 | hypothetical protein | VF |
| EL018_RS17975 () | 3686707..3689220 | + | 2514 | Protein_3487 | Protein ClpV1 | VF |
| EL018_RS17980 () | 3689217..3690251 | + | 1035 | WP_050488456.1 | hypothetical protein | VF |
| EL018_RS17985 () | 3690275..3690757 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| EL018_RS17990 () | 3690801..3691715 | + | 915 | WP_032266101.1 | hypothetical protein | - |
| EL018_RS17995 () | 3691725..3692204 | + | 480 | WP_001236645.1 | hypothetical protein | - |
| EL018_RS18000 () | 3692341..3693126 | - | 786 | WP_001086141.1 | lipoprotein | - |
| EL018_RS18010 () | 3693663..3694394 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| EL018_RS18015 () | 3694459..3694926 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| EL018_RS18020 () | 3694923..3695645 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| EL018_RS18025 () | 3695679..3696434 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| EL018_RS18030 () | 3696506..3697864 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| EL018_RS18035 () | 3697912..3698508 | - | 597 | Protein_3498 | methyltransferase domain-containing protein | - |
| EL018_RS18040 () | 3698539..3699339 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| EL018_RS18045 () | 3699580..3700494 | + | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| EL018_RS18050 () | 3700491..3701294 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|