MGE detailed information
MGE type: Prophage MGE length: 43804 bp
Accession: NZ_LR134082 Location: 2214709..2258512 Organism: Escherichia coli strain NCTC9038 Replicon: chromosome
Accession: NZ_LR134082 Location: 2214709..2258512 Organism: Escherichia coli strain NCTC9038 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL018_RS10755 () | 2210609..2211828 | + | 1220 | Protein_2084 | DNA-binding transcriptional repressor Mlc | - |
| EL018_RS10760 () | 2211953..2212648 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| EL018_RS10765 () | 2212601..2213893 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| EL018_RS10770 () | 2214052..2214666 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| EL018_RS10775 () | 2214709..2215563 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| EL018_RS10780 () | 2215565..2216182 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| EL018_RS10785 () | 2216193..2218616 | - | 2424 | WP_001340362.1 | dimethyl sulfoxide reductase subunit A | - |
| EL018_RS10790 () | 2218677..2219786 | - | 1110 | WP_077785974.1 | molybdopterin-dependent oxidoreductase | - |
| EL018_RS10800 () | 2221331..2222683 | + | 1353 | Protein_2093 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL018_RS10805 () | 2223701..2224090 | + | 390 | WP_126493602.1 | hypothetical protein | - |
| EL018_RS10810 () | 2224092..2224832 | + | 741 | WP_126493603.1 | KilA-N domain-containing protein | - |
| EL018_RS10815 () | 2225105..2225617 | + | 513 | WP_126493604.1 | hypothetical protein | - |
| EL018_RS10825 () | 2227439..2228851 | - | 1413 | Protein_2098 | molybdopterin-dependent oxidoreductase | - |
| EL018_RS10830 () | 2229050..2229355 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| EL018_RS10835 () | 2229463..2230173 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| EL018_RS10840 () | 2230176..2230736 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| EL018_RS10845 () | 2230771..2231112 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| EL018_RS10850 () | 2231247..2231573 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| EL018_RS10855 () | 2231779..2232992 | + | 1214 | Protein_2104 | starvation-sensing protein RspA | - |
| EL018_RS10860 () | 2233004..2234023 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| EL018_RS10870 () | 2234211..2235491 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| EL018_RS10875 () | 2235526..2235777 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| EL018_RS10880 () | 2235850..2237832 | - | 1983 | Protein_2108 | 3'-5' exoribonuclease | - |
| EL018_RS10885 () | 2237822..2238073 | + | 252 | Protein_2109 | DUF977 family protein | - |
| EL018_RS10890 () | 2238070..2238426 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| EL018_RS22835 () | 2239037..2239324 | + | 288 | Protein_2111 | hypothetical protein | - |
| EL018_RS10905 () | 2240093..2241406 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| EL018_RS10910 () | 2241843..2242175 | - | 333 | WP_001301033.1 | protein FlxA | - |
| EL018_RS10915 () | 2242378..2242683 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| EL018_RS10920 () | 2242708..2242947 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| EL018_RS10925 () | 2242947..2243234 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| EL018_RS10930 () | 2243306..2243461 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| EL018_RS10935 () | 2243678..2243929 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| EL018_RS10940 () | 2243996..2244274 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| EL018_RS10945 () | 2244276..2245325 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| EL018_RS10950 () | 2245339..2246091 | + | 753 | WP_001047135.1 | antitermination protein | - |
| EL018_RS10955 () | 2246369..2246458 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| EL018_RS10960 () | 2246513..2246725 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| EL018_RS10965 () | 2247026..2247241 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| EL018_RS22980 () | 2247605..2247775 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| EL018_RS10970 () | 2247995..2248210 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| EL018_RS10980 () | 2248310..2249522 | - | 1213 | Protein_2127 | IS3 family transposase IS1203 | Transposase |
| EL018_RS10985 () | 2249560..2249838 | + | 279 | WP_126493607.1 | DUF1327 domain-containing protein | - |
| EL018_RS10990 () | 2249835..2250368 | + | 534 | WP_001092971.1 | lysozyme | - |
| EL018_RS10995 () | 2250365..2250862 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| EL018_RS11000 () | 2251225..2251437 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| EL018_RS11005 () | 2251448..2251636 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| EL018_RS11010 () | 2251639..2251704 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| EL018_RS11015 () | 2251784..2251939 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| EL018_RS11020 () | 2252111..2252284 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| EL018_RS11025 () | 2252436..2252846 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| EL018_RS11030 () | 2252904..2253137 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| EL018_RS11035 () | 2253526..2254071 | + | 546 | WP_000453589.1 | DNA-packaging protein | - |
| EL018_RS11040 () | 2254029..2254355 | + | 327 | Protein_2139 | phage tail protein | - |
| EL018_RS11045 () | 2254322..2254630 | + | 309 | WP_071524888.1 | phage tail protein | - |
| EL018_RS11050 () | 2254630..2255205 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| EL018_RS11055 () | 2255303..2255893 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| EL018_RS11060 () | 2256210..2256443 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| EL018_RS11065 () | 2256512..2256625 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| EL018_RS11070 () | 2257229..2258512 | + | 1284 | Protein_2145 | MHS family MFS transporter YdfJ | - |
| EL018_RS11075 () | 2258601..2260061 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| EL018_RS11080 () | 2260096..2260299 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| EL018_RS11085 () | 2260476..2261162 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| EL018_RS11090 () | 2261251..2261997 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|