MGE detailed information
MGE type: Genomic_island MGE length: 74866 bp
Accession: NZ_LR134080 Location: 4407140..4482005 Organism: Escherichia coli strain NCTC9082 Replicon: chromosome
Accession: NZ_LR134080 Location: 4407140..4482005 Organism: Escherichia coli strain NCTC9082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL023_RS21645 () | 4402178..4403143 | + | 966 | WP_001315978.1 | DMT family transporter | - |
| EL023_RS21650 () | 4403251..4403913 | + | 663 | WP_000331456.1 | iron-sulfur cluster repair protein YtfE | - |
| EL023_RS21655 () | 4403958..4405370 | - | 1413 | WP_000228346.1 | D-serine/D-alanine/glycine transporter | - |
| EL023_RS21660 () | 4405679..4406299 | - | 621 | WP_000211225.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| EL023_RS21670 () | 4406518..4407156 | + | 639 | WP_001119478.1 | cell division protein YtfB | - |
| EL023_RS21675 () | 4407140..4407541 | - | 402 | Protein_4156 | TetR/AcrR family transcriptional regulator | - |
| EL023_RS21680 () | 4407814..4408608 | + | 795 | WP_001311329.1 | DUF2686 family protein | - |
| EL023_RS21685 () | 4408679..4409128 | - | 450 | WP_001196062.1 | 50S ribosomal protein L9 | - |
| EL023_RS21690 () | 4409170..4409397 | - | 228 | WP_000135199.1 | 30S ribosomal protein S18 | - |
| EL023_RS21695 () | 4409402..4409716 | - | 315 | WP_001315977.1 | primosomal replication protein N | - |
| EL023_RS21700 () | 4409723..4410118 | - | 396 | WP_001216676.1 | 30S ribosomal protein S6 | - |
| EL023_RS21705 () | 4410445..4410720 | + | 276 | WP_000492914.1 | DUF1471 domain-containing protein | - |
| EL023_RS21710 () | 4410850..4411536 | - | 687 | WP_001170792.1 | L-ribulose-5-phosphate 4-epimerase UlaF | - |
| EL023_RS21720 () | 4411536..4412351 | - | 816 | Protein_4164 | L-ribulose-5-phosphate 3-epimerase UlaE | - |
| EL023_RS21725 () | 4412526..4413707 | + | 1182 | WP_001131670.1 | Prophage integrase IntS ; Integrase | Integrase |
| EL023_RS21730 () | 4413990..4414619 | + | 630 | WP_000621911.1 | response regulator transcription factor | - |
| EL023_RS21735 () | 4414619..4416160 | + | 1542 | WP_000089291.1 | MASE1 domain-containing protein | - |
| EL023_RS21740 () | 4416233..4417549 | + | 1317 | WP_072146922.1 | MFS transporter family glucose-6-phosphate receptor UhpC | - |
| EL023_RS21745 () | 4417546..4418577 | + | 1032 | WP_000783757.1 | ABC transporter substrate-binding protein | - |
| EL023_RS21750 () | 4418646..4420724 | + | 2079 | WP_016234044.1 | iron ABC transporter permease | - |
| EL023_RS21755 () | 4420736..4421782 | + | 1047 | WP_032198273.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| EL023_RS24960 () | 4422587..4422775 | + | 189 | WP_168728585.1 | hypothetical protein | - |
| EL023_RS21770 () | 4422872..4423051 | + | 180 | WP_001299815.1 | hypothetical protein | - |
| EL023_RS21775 () | 4423103..4423297 | + | 195 | WP_001004881.1 | hypothetical protein | - |
| EL023_RS21780 () | 4424078..4424414 | - | 337 | Protein_4175 | hypothetical protein | - |
| EL023_RS21790 () | 4425055..4425273 | - | 219 | WP_032198272.1 | hypothetical protein | - |
| EL023_RS21805 () | 4426726..4428815 | + | 2090 | Protein_4177 | Vitamin B12 transporter BtuB | VF |
| EL023_RS21810 () | 4429033..4429192 | - | 160 | Protein_4178 | transposase domain-containing protein | - |
| EL023_RS21815 () | 4429677..4429919 | + | 243 | WP_001363144.1 | hypothetical protein | - |
| EL023_RS21825 () | 4430210..4430578 | + | 369 | WP_001443103.1 | hypothetical protein | - |
| EL023_RS21830 () | 4430582..4430797 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| EL023_RS21840 () | 4431375..4432205 | - | 831 | Protein_4182 | IS110 family transposase ISEc45 | Transposase |
| EL023_RS21845 () | 4432263..4432451 | + | 189 | Protein_4183 | transposase domain-containing protein | - |
| EL023_RS21850 () | 4432862..4433053 | - | 192 | WP_000065818.1 | hypothetical protein | - |
| EL023_RS21855 () | 4433390..4434944 | + | 1555 | Protein_4185 | L-lactate permease | - |
| EL023_RS21860 () | 4434994..4435713 | + | 720 | WP_001102090.1 | (Fe-S)-binding protein | - |
| EL023_RS21865 () | 4435724..4437139 | + | 1416 | WP_021528407.1 | iron-sulfur cluster-binding protein | - |
| EL023_RS21870 () | 4437144..4437842 | + | 699 | WP_000431498.1 | lactate utilization protein C | - |
| EL023_RS21875 () | 4438251..4438493 | - | 243 | Protein_4189 | DUF3387 domain-containing protein | - |
| EL023_RS21880 () | 4438647..4439027 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| EL023_RS21885 () | 4439024..4439332 | + | 309 | WP_032199315.1 | IS66 family transposase ISEc8 | Transposase |
| EL023_RS21890 () | 4439399..4440421 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| EL023_RS21895 () | 4440418..4441200 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| EL023_RS21905 () | 4441380..4442918 | + | 1539 | WP_115189874.1 | IS66 family transposase ISEc8 | Transposase |
| EL023_RS21910 () | 4442957..4443624 | - | 668 | Protein_4195 | outer membrane beta-barrel protein | - |
| EL023_RS21915 () | 4443928..4444478 | - | 551 | Protein_4196 | ISAs1 family transposase | - |
| EL023_RS21920 () | 4444495..4445415 | - | 921 | WP_016234205.1 | urea transporter | - |
| EL023_RS21930 () | 4445714..4447150 | - | 1437 | WP_047645367.1 | Hemolysin secretion protein D, chromosomal | VF |
| EL023_RS21935 () | 4447169..4449292 | - | 2124 | WP_047645368.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| EL023_RS21940 () | 4449363..4452437 | - | 3075 | WP_047645370.1 | Hemolysin, chromosomal | VF |
| EL023_RS21945 () | 4452449..4452961 | - | 513 | WP_021528397.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| EL023_RS21955 () | 4453868..4454992 | + | 1125 | Protein_4202 | IS66 family transposase ISEc43 | Transposase |
| EL023_RS21960 () | 4455342..4456475 | - | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| EL023_RS21965 () | 4456536..4456724 | + | 189 | Protein_4204 | IS66 family transposase | - |
| EL023_RS21970 () | 4456962..4458248 | - | 1287 | WP_047645408.1 | McrC family protein | - |
| EL023_RS21975 () | 4458241..4460298 | - | 2058 | WP_000366615.1 | AAA family ATPase | - |
| EL023_RS21985 () | 4461070..4461495 | - | 426 | WP_057109998.1 | hypothetical protein | - |
| EL023_RS21990 () | 4461492..4461875 | - | 384 | WP_016234197.1 | hypothetical protein | - |
| EL023_RS21995 () | 4462134..4462703 | - | 570 | WP_000221559.1 | inovirus Gp2 family protein | - |
| EL023_RS22000 () | 4462903..4463100 | + | 198 | WP_000236754.1 | hypothetical protein | - |
| EL023_RS22005 () | 4463441..4463566 | - | 126 | Protein_4211 | hemolysin activation protein | - |
| EL023_RS22015 () | 4464320..4464526 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| EL023_RS22020 () | 4464613..4465215 | + | 603 | WP_057109996.1 | hypothetical protein | - |
| EL023_RS22035 () | 4465537..4467021 | - | 1485 | WP_126492302.1 | DUF3987 domain-containing protein | - |
| EL023_RS22050 () | 4468251..4469123 | + | 873 | WP_001069760.1 | GTPase family protein | - |
| EL023_RS22055 () | 4469451..4472570 | + | 3120 | WP_126492304.1 | autotransporter adhesin Ag43 | - |
| EL023_RS22060 () | 4472691..4475207 | + | 2517 | WP_126492306.1 | hypothetical protein | - |
| EL023_RS22065 () | 4475283..4475738 | + | 456 | WP_000581493.1 | hypothetical protein | - |
| EL023_RS24965 () | 4475857..4476068 | - | 212 | Protein_4219 | hypothetical protein | - |
| EL023_RS22080 () | 4476149..4476967 | + | 819 | WP_057109691.1 | DUF945 domain-containing protein | - |
| EL023_RS22085 () | 4476967..4477212 | + | 246 | WP_001620925.1 | hypothetical protein | - |
| EL023_RS22090 () | 4477306..4477785 | + | 480 | WP_001442265.1 | antirestriction protein | - |
| EL023_RS22095 () | 4477800..4478276 | + | 477 | WP_001186756.1 | RadC family protein | - |
| EL023_RS22100 () | 4478339..4478560 | + | 222 | WP_044808382.1 | DUF987 domain-containing protein | - |
| EL023_RS22105 () | 4478579..4479223 | + | 645 | WP_016234190.1 | hypothetical protein | - |
| EL023_RS22110 () | 4479273..4479641 | + | 369 | WP_057109690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EL023_RS22115 () | 4479731..4480108 | + | 378 | WP_054518448.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| EL023_RS22120 () | 4480105..4480593 | + | 489 | WP_054518447.1 | hypothetical protein | - |
| EL023_RS22125 () | 4480613..4480810 | + | 198 | WP_000772027.1 | DUF957 domain-containing protein | - |
| EL023_RS22130 () | 4480895..4481743 | + | 849 | WP_032198269.1 | DUF4942 domain-containing protein | - |
| EL023_RS22135 () | 4481802..4482005 | - | 204 | WP_047645199.1 | hypothetical protein | - |
| EL023_RS22140 () | 4482015..4482665 | - | 651 | Protein_4232 | 3-keto-L-gulonate-6-phosphate decarboxylase UlaD | - |
| EL023_RS22145 () | 4482679..4483143 | - | 465 | WP_000776543.1 | PTS ascorbate transporter subunit IIA | - |
| EL023_RS22150 () | 4483153..4483458 | - | 306 | WP_000218362.1 | PTS ascorbate transporter subunit IIB | - |
| EL023_RS22155 () | 4483474..4484871 | - | 1398 | WP_001384980.1 | PTS ascorbate transporter subunit IIC | - |
| EL023_RS22160 () | 4485225..4486289 | + | 1065 | Protein_4236 | L-ascorbate 6-phosphate lactonase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|