MGE detailed information
MGE type: Genomic_island MGE length: 34806 bp
Accession: NZ_LR134080 Location: 4262573..4297378 Organism: Escherichia coli strain NCTC9082 Replicon: chromosome
Accession: NZ_LR134080 Location: 4262573..4297378 Organism: Escherichia coli strain NCTC9082 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL023_RS20895 () | 4260171..4260896 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| EL023_RS20900 () | 4260933..4261472 | - | 540 | WP_115199231.1 | type 1 fimbrial protein | - |
| EL023_RS20905 () | 4261537..4262091 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| EL023_RS20910 () | 4262573..4263169 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| EL023_RS20915 () | 4263646..4264248 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| EL023_RS20920 () | 4265702..4266418 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| EL023_RS20925 () | 4266438..4267544 | + | 1107 | WP_001315214.1 | N-acetylneuraminate epimerase | - |
| EL023_RS20930 () | 4267609..4268589 | + | 981 | WP_001295601.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| EL023_RS20935 () | 4268597..4269247 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| EL023_RS24835 () | 4270284..4270436 | - | 153 | WP_001280445.1 | hypothetical protein | - |
| EL023_RS20960 () | 4270521..4270718 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| EL023_RS20965 () | 4270730..4271218 | - | 489 | WP_000777547.1 | hypothetical protein | - |
| EL023_RS20970 () | 4271215..4271589 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| EL023_RS20975 () | 4271679..4272047 | - | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| EL023_RS20980 () | 4272210..4272431 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| EL023_RS20985 () | 4272494..4272970 | - | 477 | WP_001560709.1 | RadC family protein | - |
| EL023_RS20990 () | 4272986..4273471 | - | 486 | WP_000849588.1 | antirestriction protein | - |
| EL023_RS20995 () | 4273526..4274344 | - | 819 | WP_021535744.1 | DUF945 domain-containing protein | - |
| EL023_RS21005 () | 4274444..4274677 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| EL023_RS21010 () | 4274756..4275211 | - | 456 | WP_000581504.1 | hypothetical protein | - |
| EL023_RS21015 () | 4275287..4277803 | - | 2517 | WP_001315618.1 | hypothetical protein | - |
| EL023_RS21020 () | 4277924..4281043 | - | 3120 | WP_126492290.1 | autotransporter adhesin Ag43 | - |
| EL023_RS21025 () | 4281415..4282287 | - | 873 | WP_001069760.1 | GTPase family protein | - |
| EL023_RS21035 () | 4283518..4285002 | + | 1485 | WP_001297234.1 | DUF3987 domain-containing protein | - |
| EL023_RS21050 () | 4285324..4285926 | - | 603 | WP_000813451.1 | hypothetical protein | - |
| EL023_RS21055 () | 4286021..4286227 | - | 207 | WP_000235215.1 | AlpA family phage regulatory protein | - |
| EL023_RS21080 () | 4287848..4288417 | + | 570 | WP_000221544.1 | inovirus Gp2 family protein | - |
| EL023_RS21085 () | 4288677..4289078 | + | 402 | WP_000270978.1 | hypothetical protein | - |
| EL023_RS21090 () | 4289066..4289500 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| EL023_RS21100 () | 4289855..4290235 | + | 381 | WP_002431009.1 | IS66 family transposase ISEc8 | Transposase |
| EL023_RS21105 () | 4290232..4290579 | + | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| EL023_RS21110 () | 4290629..4292014 | + | 1386 | WP_115199232.1 | IS66 family transposase ISEc8 | Transposase |
| EL023_RS21115 () | 4292253..4293611 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| EL023_RS21120 () | 4293822..4295438 | - | 1617 | WP_126492292.1 | IS66 family transposase ISEc43 | Transposase |
| EL023_RS21125 () | 4295469..4295819 | - | 351 | WP_000624723.1 | IS66 family transposase ISEc47 | Transposase |
| EL023_RS21130 () | 4295816..4296241 | - | 426 | WP_000422750.1 | IS66 family transposase ISEc23 | Transposase |
| EL023_RS21135 () | 4296436..4296567 | + | 132 | Protein_4055 | IS3 family transposase | - |
| EL023_RS21145 () | 4296887..4297144 | - | 258 | WP_000555341.1 | hypothetical protein | - |
| EL023_RS21150 () | 4297484..4297588 | - | 105 | Protein_4057 | integrase core domain-containing protein | - |
| EL023_RS21155 () | 4297821..4297886 | + | 66 | Protein_4058 | omptin family outer membrane protease | - |
| EL023_RS21160 () | 4297906..4298601 | - | 696 | Protein_4059 | IS1 family transposase | - |
| EL023_RS25080 () | 4298688..4298756 | - | 69 | WP_211180522.1 | protein YkiE | - |
| EL023_RS21165 () | 4298893..4299414 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| EL023_RS21170 () | 4299411..4300364 | + | 954 | WP_001068910.1 | fec operon regulator FecR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|